Dcar008912.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- gata5-b
- Assembly
- GCA_029229535.1
- Location
- CM055255.1:38130258-38142133[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-18 3.3e-14 52.7 1.8 1 35 259 292 259 293 0.97 2 2 8.8e-18 3.2e-14 52.7 6.7 1 35 315 348 315 349 0.97
Sequence Information
- Coding Sequence
- ATGGACACGAAAGACGATCAACAAAATTCGCCTAAGAAGGTGGATTCGAAAGAAGAATCGAACGAGGCGGATCGAGAGCAATCGACACCAGGACCCGGAGTAATACGAAGAAATTTCATAACAACTTCCGGTACTATAGTGGAAACGAGCGAAGAACAACCACCGGAACCCACCACCGAAGAAGTGATAAATACTACGGGGTGTAACTCGAACGAACAAAGTCCGACAAACGTAATCGTCGATATGCCGGcagagaattttcaaaatacgacTTACGGTCAAGATTTGGAATACGCCACTTTGAATATCGAAGGGAACGTGGTACCAATAGCGGTGACAACTAATATAGAACAAACCGGCGACTACGCCAACCTCCAAACGGCTCAATACAACAACGGTTACAGCGACGCCACCCAGTATCTAACCCAacaacaatacaataatttgtaCATGGAAAGAAACAGTGTCGGAAGCTCTTCTCCGAACGCCGTTTTATACAGGGAAGATCCGAATTTGGCCGCAAATCGATATCAAGGCAACTACGACGGCGCCCAGTCCCAAATCAATTTGATATCCGCTTCGGGGGAGACTTACTACACCGGTACATGGCCTTCGACGAGCAGCGGTACTTACCACCAACAATACGGTAACAACCCCATACCGCAGGCAGATAGTACCCAACCTTACGGGGGTTTATTCGTTAATTCGTCATGGTCTTCTGGTAGTTTAGACGAGGGACGTCCGCCGCCGGGTCAAGAGGTACTAGTTAAAGAATGCGTTAATTGTGGGGCTAGTGTCACACCCCTTTGGCGTAGGGACGGTACGGGGCATTATCTGTGCAACGCTTGCGGTTTGTACCACAAAATTAACGGGGTGCATAGACCCCCCATTAGGCCCAACAAAAAACCACAGGCGACCGGAAATCGTAGGAACGGCGTCACTTGTGCCAATTGTAAGACAAATAATACAACTTTATGGAGGAGGAACAACCAAGGAGAGCCGGTTTGCAACGCTTGCGGCCTCTACTTCAAATTACATAACGTTAACAGACCTATCAGTATGAAAAAAGACGGTATCCAGACCCGTAAGAGGAGACCGAAAAATTCTGGGGGAAGTCAAGCCGTTTCCGGTCATATGAGATTAGGTAGCGTCATCTCTGCGTATCCCTACCAAAACAATCCAGAGCTGGACTTACAAGATCAATACCAAGTACCAATAAGCCTGTACCAACCGCCACCCGGACCTGTGCAATACCGACAATTCAATTCCGACAACCTCAGAAGCCTAAATGCGCAGCCGCTACAACCGATAATCCCCGCGGAAGACGAACAAACCAGCGTGATAACCTCGACTTCACAACAAGCCAGATTCAGACAGGAAGCCGAAGATGACGAAAGCAACGGAAATCCTCATTCGAATGCCTAA
- Protein Sequence
- MDTKDDQQNSPKKVDSKEESNEADREQSTPGPGVIRRNFITTSGTIVETSEEQPPEPTTEEVINTTGCNSNEQSPTNVIVDMPAENFQNTTYGQDLEYATLNIEGNVVPIAVTTNIEQTGDYANLQTAQYNNGYSDATQYLTQQQYNNLYMERNSVGSSSPNAVLYREDPNLAANRYQGNYDGAQSQINLISASGETYYTGTWPSTSSGTYHQQYGNNPIPQADSTQPYGGLFVNSSWSSGSLDEGRPPPGQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPIRPNKKPQATGNRRNGVTCANCKTNNTTLWRRNNQGEPVCNACGLYFKLHNVNRPISMKKDGIQTRKRRPKNSGGSQAVSGHMRLGSVISAYPYQNNPELDLQDQYQVPISLYQPPPGPVQYRQFNSDNLRSLNAQPLQPIIPAEDEQTSVITSTSQQARFRQEAEDDESNGNPHSNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -