Dcar008911.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- gata5-b
- Assembly
- GCA_029229535.1
- Location
- CM055255.1:38063198-38107498[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-18 1.8e-14 53.5 2.7 1 34 295 327 295 329 0.97 2 2 2.3e-18 8.3e-15 54.6 4.0 1 35 349 382 349 383 0.97
Sequence Information
- Coding Sequence
- atgcaTTCCAGGATCATTATTCCTGACAACTCACAATACGCCGGTGTGATTGTAGGTGCATACGGGGAAGAAACCAGGCAACAACAATACAGTCCCGCCTCACAAAATGACGGGGCGGAGCCTTCGCCCCATTCGAGAGCCGCCACTCCCATGGAATGCCTCGCGTATACGGAGGTGGAACCCGATAATTATCAGGCTCTCGTCCGAACAGACGGAAGGTATATGCCGTTCACTTTAGAGGTTCCGTTAGAAGCCAATGGCAACGATTATCTGCAGCTCGGACCGACGACCATCGCCAATGGTTCCCCACCACAAGATAGCGGAAGTCCAAGTCCTGGTTCACCAAGAGTTTACACTCTTTCCACGATACATACCGGGGATGATCAACAATCAGTAATCGAAGGATCTCAATTAACTCAACTCACCAGTCACATAAGTTATACGGGAGTCGGAATGAACTCTCCTAGTGGAGGAAATATCTCTAgCCCCTTATATTCGAGAGGAACGGGTGCTTATACCACAAGTACCATGCCATATTATAACAGTTCCCCGGAACTTACCCCCCAATCATCACAATTATGGGCCAATAATGGAGTCAACTCAACCGGAACGTTGTCTCTACCAGAAGACTACCCAAAAGTAACATCTTCTTCGACTTCGTTACCAGGTTTCAGTAGACTACCAACGACCTTCACCAACAATCACAGCCACCATCGCAGCAATACCTACTTACCCAACGCCATCTATGGCGATTGGCCGGCTTACGCCACCGACCAATACAATCTCAATTCGACCAATCAAAGAACTCGACCGATCTCGGCTGCGGCATCGTTATCTGCAATCGATCCACGCACCGCCGAATTCTTCACCGAAGGTAGGGAATGCGTGAATTGCGGCGCAATAGACACACCGTTATGGCGCAGAGACGGAACCGGCCATTATCTGTGCAACGCTTGCGGTTTATACCACAAGATGAACGGAATGAATCGACCTCTGGTCAAGCAGCCTCGCAGATTGTCGGCGTCTCGTCGAGCGGGTCTCACTTGCACCAACTGCCACACGAGTACGACTTCCCTTTGGAGGAGGAACGCATTGGGGGAACCGGTTTGCAACGCCTGCGGCCTCTATTTCAAATTACATTCCGTAAATCGACCTCTATCGATGAAAAAAGACAGCATACAAACGAGGAAGCGGAAACCGAAAGGTAGCAAAGAATCCGGTTCCGGAGGCGGCGGCGGTAGCGCACACATACCGAGAAATCCCGCTATAAAAATGGAGGAGGTCGGCGTGAAATTGGAACATTGTTCGATCGaaaactaCGGGGGCGTCGCGTCGATGGCTCAACTCCAACATTCGACTAGTTACTCGTATtctcaacaacaacaacaacaacaacaacggTTGAGTCCGACGTATAGTTCGGCGGCGGTGACGGCGGCGCAGACGCATTATTACGACGCCATACTTCAACAGCAGCCGAGTCCGGGGCAGGCGTCCGACGAATCCGACAGTTCCACCaccaacaacaacaacaacaataacaaCAAAGCTTTGATAAACGGCGGCGAACACGGCGTCGATAGACCGACGGTCGTTTCGTCGTTGTCGTCgtaa
- Protein Sequence
- MHSRIIIPDNSQYAGVIVGAYGEETRQQQYSPASQNDGAEPSPHSRAATPMECLAYTEVEPDNYQALVRTDGRYMPFTLEVPLEANGNDYLQLGPTTIANGSPPQDSGSPSPGSPRVYTLSTIHTGDDQQSVIEGSQLTQLTSHISYTGVGMNSPSGGNISSPLYSRGTGAYTTSTMPYYNSSPELTPQSSQLWANNGVNSTGTLSLPEDYPKVTSSSTSLPGFSRLPTTFTNNHSHHRSNTYLPNAIYGDWPAYATDQYNLNSTNQRTRPISAAASLSAIDPRTAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNALGEPVCNACGLYFKLHSVNRPLSMKKDSIQTRKRKPKGSKESGSGGGGGSAHIPRNPAIKMEEVGVKLEHCSIENYGGVASMAQLQHSTSYSYSQQQQQQQQRLSPTYSSAAVTAAQTHYYDAILQQQPSPGQASDESDSSTTNNNNNNNNKALINGGEHGVDRPTVVSSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -