Basic Information

Insect: Diorhabda carinata
Gene Symbol: ZNF687
Assembly: GCA_029229535.1
Location: CM055253.1:22842848-22851008[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.19 18 6.5 0.8 1 20 53 72 53 74 0.93

2 9 0.026 2.3 9.3 1.4 2 23 288 309 287 309 0.97

3 9 1.4e-05 0.0012 19.6 0.2 1 20 315 334 315 336 0.95

4 9 0.13 12 7.1 1.0 1 23 347 372 347 372 0.92

5 9 0.0082 0.75 10.9 2.7 1 23 377 399 377 399 0.96

6 9 0.13 12 7.1 1.9 1 21 442 462 442 463 0.92

7 9 0.021 1.9 9.6 2.9 1 23 588 610 588 610 0.98

8 9 0.00063 0.057 14.4 3.0 1 23 617 640 617 640 0.95

9 9 0.07 6.4 7.9 0.4 2 23 682 703 682 703 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.19	18	6.5	0.8	1	20	53	72	53	74	0.93
2	9	0.026	2.3	9.3	1.4	2	23	288	309	287	309	0.97
3	9	1.4e-05	0.0012	19.6	0.2	1	20	315	334	315	336	0.95
4	9	0.13	12	7.1	1.0	1	23	347	372	347	372	0.92
5	9	0.0082	0.75	10.9	2.7	1	23	377	399	377	399	0.96
6	9	0.13	12	7.1	1.9	1	21	442	462	442	463	0.92
7	9	0.021	1.9	9.6	2.9	1	23	588	610	588	610	0.98
8	9	0.00063	0.057	14.4	3.0	1	23	617	640	617	640	0.95
9	9	0.07	6.4	7.9	0.4	2	23	682	703	682	703	0.95

Sequence Information

Coding Sequence: ATGGAAATGACTGCACCAATGGCCAATGGGTTCACTTATGATAGAATCTCAATATTTGgagaATGTCGGAATCGGATCAAATCAATGTGGGATATTCTATTTGGAGATGAGCCTAAGCAGTGGATAAGCTTTAAGCCAACTTTAGGTGCTTATGTTTATCCTTGTTACGCCTGCCAAACTTTgttttcaTCGTTTTCATCATTACAAGATCATGTCCATAGAAGAATTATTATACTGAGATATAAATGCTCCCGATGTTCAGGTAGAATATTGCGGTTCTACAATAGATGTACTCTATTATTACATACCCGTCATCATTATACTCTCAAAGAGGGTCAGATCAATTTGGCTGATCTAGATACTTCTACTTTGCCTATAGATTTAGCAGGCTTTTTACCAGTTCCTAACATTCCGTTAATTTACgaaaatgatgaagaagaagacgTTCCCGATAATATCTACGTAAACGTGCAGTTTTATTGGCCCGGTGAAGATCAAAAAGGCAAAGCGGTTGTTGTTTTAAGCCCTAGCGATTTTATATTCAGAGATCCGAACCAACCGTTATGTCTTAAACAAGTTTGCAACAATATACCGAAATGTCGGTTTATCACTTTATATGATCAAAAAAGATTGACGGAAAGAGCTTTATTGACAAAACCAAACGAACCAGAACTTGATACAAATGTTAAAATCGAATTATTCGATTACGCAGATCGATTTACTATGCCGATTATATCGAAAGTGGAATCTTTACACGAAAAATCTTACAACGTACCACGATGCTTGGAATGTAAATCTGCCGTAAGTGCTACCATGTTGGAACATTACAAGGGTAGTAATAAACCCAACGATTTAAATTTAACGTGTTCCATTTGTAAGTTCGTCGCCCCAACAAAATGTTCTTTCAAAGCGCACGAAAGGATACATAAGAATGAAGCTCCTCATGTTTGCCCGGATTGCGGTAAAGATTTCGAAACTTCCGAATTATTACACCAACATATGGAAGAAGTTTGTTTCCATTTAGCGAAACACGTAAAATATCGTTGTCCCGGCAAGAGATGTAGTAAATTATTCGCTTCGTTAGCCAATTTTTCCTCGCATTTTTCCCAACAGCATTTCAAATGCGTTTATACTTGTTCGGTATGTAAGTGTACTTCGTACTCGGTATCCGAATTACAAAAACATATCGAATTTCACGATGGCGATTGTACGTTTTCAAAAGTTTACCAATGCGGCGTTTGTACGGACTTCGGAACAATTGGCGATAACGAATTCGATAAACATATCGAGATACATTcgaaaattgataatataatgTACGTTTATTTATGCAAATATTGTCGTAATACTTTTCGATCCACTTTTACATTCGCGACTCACCTTTTAAAATGTACGAGTAAAATGATATCGGACACTAAATtacgtttaaaaaataaacctaaagtgttaataacgaaaaaatatttttgtattttatgcaACGATCAAATACCGTTGGAAAAGAAAGTGTCCCATATGAGATTATGTAAATATGCCCGTCCGGTTGTTTACGTTAACAAATTAGATATTAGTGATATATCGAACGgtattcatttgaatatatctCAGGAGAATAGTAGATCGAGCGAATCTCCCAAATCtgaagaaaattgtaaaaagaaAAGGAAACGATATCTCACTGATATCAGTAGACGAAGGAAACCTGAAAAAGTACAAGAACCGGATTTGATAGCGGAAAAACCAATCGAATTCGACGGCACATATTATTGTAAATTATGTGATTATCAGTCTAGAGAACGAAACGAATTTCACGACCACATTCGGATTCACAGAAATATTTCAACGGCGTATCAGTGTATGGAATGCGGCGAATGTTTTGTGGTTAAACCGTCTCTTTATAAACATTTACTACATTTCCACAATATCCATAATTATGAGTCTTATTTGAAAGATAACGATTGTTTCGATGTTGAGGCTgtgaaagaattggaaaatgtgaTGCGATTAGCACCTGGTGAATCGAAAGGACCCGTCAAAGACAATCAATGTAGAGTGTGTTTAGATGAATTTGACGATTCGGTTGCgttaaataaacatttcagaACACATGGAATGGCGTTTTTACTaaagaattcaaaataa
Protein Sequence: MEMTAPMANGFTYDRISIFGECRNRIKSMWDILFGDEPKQWISFKPTLGAYVYPCYACQTLFSSFSSLQDHVHRRIIILRYKCSRCSGRILRFYNRCTLLLHTRHHYTLKEGQINLADLDTSTLPIDLAGFLPVPNIPLIYENDEEEDVPDNIYVNVQFYWPGEDQKGKAVVVLSPSDFIFRDPNQPLCLKQVCNNIPKCRFITLYDQKRLTERALLTKPNEPELDTNVKIELFDYADRFTMPIISKVESLHEKSYNVPRCLECKSAVSATMLEHYKGSNKPNDLNLTCSICKFVAPTKCSFKAHERIHKNEAPHVCPDCGKDFETSELLHQHMEEVCFHLAKHVKYRCPGKRCSKLFASLANFSSHFSQQHFKCVYTCSVCKCTSYSVSELQKHIEFHDGDCTFSKVYQCGVCTDFGTIGDNEFDKHIEIHSKIDNIMYVYLCKYCRNTFRSTFTFATHLLKCTSKMISDTKLRLKNKPKVLITKKYFCILCNDQIPLEKKVSHMRLCKYARPVVYVNKLDISDISNGIHLNISQENSRSSESPKSEENCKKKRKRYLTDISRRRKPEKVQEPDLIAEKPIEFDGTYYCKLCDYQSRERNEFHDHIRIHRNISTAYQCMECGECFVVKPSLYKHLLHFHNIHNYESYLKDNDCFDVEAVKELENVMRLAPGESKGPVKDNQCRVCLDEFDDSVALNKHFRTHGMAFLLKNSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -