Basic Information

Insect: Diorhabda carinata
Gene Symbol: Hivep1_1
Assembly: GCA_029229535.1
Location: CM055259.1:32532347-32546478[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.9e-05 0.0017 19.2 0.5 1 23 171 193 171 193 0.98

2 8 0.0016 0.15 13.1 4.6 1 21 199 219 199 223 0.89

3 8 0.32 29 5.9 0.3 2 20 361 379 360 381 0.90

4 8 3.3e-06 0.0003 21.5 2.1 1 23 914 936 914 936 0.99

5 8 2.4e-06 0.00022 22.0 4.7 1 23 942 966 942 966 0.92

6 8 2.9e-06 0.00026 21.7 1.2 2 23 1392 1413 1391 1413 0.97

7 8 0.0002 0.018 16.0 2.4 1 23 1419 1443 1419 1443 0.92

8 8 0.00064 0.058 14.4 2.7 1 23 1461 1485 1461 1485 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.9e-05	0.0017	19.2	0.5	1	23	171	193	171	193	0.98
2	8	0.0016	0.15	13.1	4.6	1	21	199	219	199	223	0.89
3	8	0.32	29	5.9	0.3	2	20	361	379	360	381	0.90
4	8	3.3e-06	0.0003	21.5	2.1	1	23	914	936	914	936	0.99
5	8	2.4e-06	0.00022	22.0	4.7	1	23	942	966	942	966	0.92
6	8	2.9e-06	0.00026	21.7	1.2	2	23	1392	1413	1391	1413	0.97
7	8	0.0002	0.018	16.0	2.4	1	23	1419	1443	1419	1443	0.92
8	8	0.00064	0.058	14.4	2.7	1	23	1461	1485	1461	1485	0.93

Sequence Information

Coding Sequence: ATggaaaaaagtgacagttacctgcacaaaaaattcaagaaaCAAATTAACGTTGAATCCATAATCCAAAATGACAAGGAAAACAAGAAGAGCGCTCCGGTGGAGACGTTCGCGcaaaaaatcgatcaaaaagaaaaagaaaaaatggataaaacgGACAATATCGAACCTGTGCCAAATCAAAGTACAAATAGCAGCCCTTCGCGTACGTCGAACGCCAAGTCTTCCATATCACTAGGCAACCAACAATCTTCGAACTCTTACATATCATATGTAGTTTCGAAACAACCAGATCATCATCAACCGACTAGTTTTGATACTAAACAGACCAACTATACAGATAATACTAGTAGCACGTCTTCCATTTTGAACAACGTTTACCCGACCGCCAACTACAATTACGCCGGAGACAATTACGGCCCATTCAACGTCAATTTCCATCGAGACGACGTCAAACCGGATGAAACGTCGACTCCCAAATACGACGAACAAAAAAACTCCGTCGGAAAATACGTTTGCCCCTATTGCAATCTAGTCTGCTCGAAACCGAGCGTTTTGCAAAAACACATCAGAGCCCACACCAACGAAAGACCGTACCCCTGCGAAAGTTGCGGCTTCTCCTTCAAAACCAGATCGAACCTCTACAAACATTGCAGATCCAGGACGCACGCCAACAGATTATTGGTGACCAAAACTCCGGACGCGAACCACGACTCCGAAATAGCGAAAAACCCGCCGAACGATTCGGAATTCAAAGACGAACCGAAGAAACCGTACAAACCCAGGTTCCATACGGCGAAATTATTCGATAACCCCCCGCAGGATAGTACCGAAGACGCGCCGAATACCTCGACGACGACCACCCGATTCGTGTCGCACCACATCAACAAAATCATAAATAGAAACAATTCCTCGGCGCCGCAACCCAGCGAGACGTTCGTACAAAAAGAAATCCGCCACGACGAGCCGCTCAACCTCACCAAAAACCGAAAGAGATCCATGAGCGAAGTAACCGAACCGGTCATCCAAAAGAGCCTAATCAAAGAACTCCTGCTGAAAAATCTGAGCTCCTCCGACATGCAATGCCCCCATTGCAAGATGATCTTCCAAACGGTCACCGAATTGGACGTCCACAAATACagaaattgcaaaggaaaatcCGCCGGACCGAAATATACCAGAAGTAGTTCGGTGAACGTCGCTTCGATATTAACGCACAACAAAAACGCTTTCGACAACATTCCTCGGATGCAATTCCCCCTCGACTCCCCGGGACCGTTCCTAGGCAAAACTCGACTAATAGAAAGCGACAAAACCAAATCGTTTTCCTTCGATAGCGGAAATCTACCTCTGGTTAATCGAGGGGAAACCGCATCCTCGCCGCCCAATTACCTTTTGTCCCCCCTTTCCTTCGATAAAGATAAAAAACCCCGCATCAAATTATTCGGGGGGGAAGTGAAAGTGCATTCGTCGGGCGAATCGAAAACCTTCAAAATCGAAGACGAATTCGATAAAGATGCGAATTTTATCGGTAATTTAAGCGAAAATCGAGTCGTCAAAACTAGTTTACAATCCGGAGGCACCGTTTTAACGAATACCAATAAATCCGACACGAAAACCCCCAAAGAAAATATAGATTTCGATAAATCGATTTTTACGTTCGATACAACTCGAAATATCGACGACGACGTATCGATTACCAAATCGTATCCGGAAGAATCGAGTCCTCTATATAAGAATATAATCGATTTCAGTCAGAACGCTCTTAAAATGTTGACGCCTAATATTAGACAACCGACTGTACCTACGAATTTTAATCATCGAACGCCGCCCGGCGACGTTAAAACCAATTTGTACAATCCTCTGAATCTATTGGTGAACGGTCAAGTCGTTAGACACGTGCCGGGTATGCCGGGACCCGTAGTCGAAAATACCCCCCCGATCCGACAAAATTTACCCCCTTTAGTAATCGATAAACCCCCTCCGATGACGGACCACCCATCTCCGAAACCGACGGAAACTTGCTCCCAGGATAAAAACGGCGCGAGGTTATTCGCGCAACCCGATAAACTGATCAAATCGCCCAAAAATAATAATCCGGTGCAAATTAGAACGACGGCCAATTTTTTGCTACCGGAAAGATTGAGCAGATCCCCGAAATCGGACGGTTCCGATACGAAATGTGCGGAAGACAAATCCGCCGAGGGGGAAATCAAGAAATTCGCCAGACCGAATAGTTTGGCTTTGAAACCGACGACGGCGTCATTGAAACAACACCACGGCTTGACGCCGACCATGTTCAATCAGATCCTGATCAGCCCAGATACGCCTCGAGTCGCCAAAAAGTACGCCGAGCATTTTCTTCACGGCAATTATTTCAGTTATTTGGGATTGAAGAGTTCCACGAGACCGGTGTATTGTACTTTGAACAAAACGCAACCTTTTTACGTGCCCCACTTCAAGAAATTGAGCATGTACTCCGAATGGAGGCAGCAGGATACCAAACAGGATAAATTGTACGTCAGCGACTACGATTCCAGACAGATTAACAAGAGTTACAGTATAGCGGGGAAGACTTCGGCCAATCTAATCATACATTCTAGTTATAAGtTTGTCATTACGGAAACGTCATCGGCACAATCTGAAAAAGAAGACGAACCACAGAAGAATAATACAATTTTAGGCGGGTACGAATGTAACGAAGATTATATTTACGTTCGAGGCAGGGGTAGAGGCCGATATGTATGCGACCAATGTGGGATTCGTTGTAAAAAACCGTCTATGCTTAAAAAGCACATCAGGACACATTCAAACGATAGGCCTTATACTTGCAGTCATTGTAATTTCagtttcaaAACTAAAGGAAACTTAACCAAACATATGAAAAGTAAGGCCCATTCGAAAAATTCCACAACTAGTACGGGATCGTCGTCTTCATCAGCCCAACAAAGCGCTCAGAGTTCTGAATCTGATACTGACGACAGCGGAATGGATAGTAGCGACGAATCGACGCGTCAACAAGAACACGAAGCGGCCTACGGCCTGTTGTCTCTTTCGCAAAAACCTACCCAAACATCCGGTAACATAGGCACGAAGAGCCCCACAGAAGCATTTATGACCACAGAAGAACTGGCGCACGTTTCAAAGACGATTTACGCCAAAAATAAATTCCTAGATCAACCAAACACAACGATGAGTCCAAGTTTCAAAACGATGGAGCTGAATATATCGGCATCAGAAGAAACTGCAGAAAATCAAAACGTTAAGACCTATTTAGGAATGGGAAGTATAAGTAGACCTTTGACGTATCCTTATACCACCGTTTTAATAGGAGAAAAGGTAGTATTACCTTCACCGGAACCGGAAAATAAGTTATCGGAAAGTGTTACCAATCCAGTAGAACCGAAATGTATTAAACAGTTCaacgttataaaaaaatacgttcCCCAAGGAAAATTAAGTCCCGATCTACCCGAAAACGAAAATTATTGTTACGAAGAGACCTTAAACAACGTTAAAAACATCACAACTACCCCCAACCGAACCCTACCTACTCTAAAAATAAACGACGTCGTAATAACCGCCGAAAGCGTGTCGgatataagaaaaagaaaattttcgataacGGAATTTCCccataaaaacaaaatacagaAAAACGACGAAGTTATGGATCTGTCGATGGCgaataatcaagaaaaattaaacggAACGTTAGTAAACGAGGTGGTGAATAATTTTAGGTTGACGGAGAGCGAAAAGAACGTCGCCAACGAAATATTCAACGCGTTACAGAAACCACAGTCTCCTCCTCGATTGGAAATTAACGAGGACAGAGAAGAAATTCCTATTTATaataacaacaacaacaacaacaatagCACCGTTATCATATTGAGATCTCTGAGTGCGGATACACAAGATCAACATCAGAACTACAACGAAGAACCTGGCAACAATACGGATTACGACAACAGCGCCATGGAAACTCTGGCCGATGTTGCCACCAAACAAGTCAAATTGGAGAAAAATACTTTGGCGAAGAGCGTCGCCagcgaatttttaaaattggccactaaaaacgaaaatatagaCGGCGGTATTAATACTGTTAATTTCGGACCCGTCAATAAGGACGTCAATGATATTATCGTTAAATCCGAAGGGAACAAGAGCTGCACCATTTGTTCCAAGAGTTTTAACAAACCTTCACAACTTAGgcTACACATGAATATCCACTATTTAGAAAGACCTTTCCGCTGTGATTCATGTTCTGTTAGTTTCAGAACGAAAGGACATTTACAAAAACACGAAAGGAGTGCTAGTCACCATAACAAGTTGTCCTCATCTCCTGCGCTTTCTTCTTCTGAACCCAGACCGTTCAAATGTTCGGATTGTAATATCGCTTTTCGGATTCACGGTCATCTAGCCAAACATCTGCGATCCAAGATGCATATACAGAGGTTGGAATGTTTGAAAAAGTTACCTTTCGGTTTGTACGCAGAATTGGAGAGATCCAACAGTCTGTTGACTGAGATAAATACTTGCGATGGGGACCAATGCCTTGAAAGTTTAaagACTCTAGCGAAAAAAGTATTCGTCAATCATCCGAACAAACTGAACGAAATAGAACAGAGAGAAACGATAATGGCGGATTCGTAG
Protein Sequence: MEKSDSYLHKKFKKQINVESIIQNDKENKKSAPVETFAQKIDQKEKEKMDKTDNIEPVPNQSTNSSPSRTSNAKSSISLGNQQSSNSYISYVVSKQPDHHQPTSFDTKQTNYTDNTSSTSSILNNVYPTANYNYAGDNYGPFNVNFHRDDVKPDETSTPKYDEQKNSVGKYVCPYCNLVCSKPSVLQKHIRAHTNERPYPCESCGFSFKTRSNLYKHCRSRTHANRLLVTKTPDANHDSEIAKNPPNDSEFKDEPKKPYKPRFHTAKLFDNPPQDSTEDAPNTSTTTTRFVSHHINKIINRNNSSAPQPSETFVQKEIRHDEPLNLTKNRKRSMSEVTEPVIQKSLIKELLLKNLSSSDMQCPHCKMIFQTVTELDVHKYRNCKGKSAGPKYTRSSSVNVASILTHNKNAFDNIPRMQFPLDSPGPFLGKTRLIESDKTKSFSFDSGNLPLVNRGETASSPPNYLLSPLSFDKDKKPRIKLFGGEVKVHSSGESKTFKIEDEFDKDANFIGNLSENRVVKTSLQSGGTVLTNTNKSDTKTPKENIDFDKSIFTFDTTRNIDDDVSITKSYPEESSPLYKNIIDFSQNALKMLTPNIRQPTVPTNFNHRTPPGDVKTNLYNPLNLLVNGQVVRHVPGMPGPVVENTPPIRQNLPPLVIDKPPPMTDHPSPKPTETCSQDKNGARLFAQPDKLIKSPKNNNPVQIRTTANFLLPERLSRSPKSDGSDTKCAEDKSAEGEIKKFARPNSLALKPTTASLKQHHGLTPTMFNQILISPDTPRVAKKYAEHFLHGNYFSYLGLKSSTRPVYCTLNKTQPFYVPHFKKLSMYSEWRQQDTKQDKLYVSDYDSRQINKSYSIAGKTSANLIIHSSYKFVITETSSAQSEKEDEPQKNNTILGGYECNEDYIYVRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHSNDRPYTCSHCNFSFKTKGNLTKHMKSKAHSKNSTTSTGSSSSSAQQSAQSSESDTDDSGMDSSDESTRQQEHEAAYGLLSLSQKPTQTSGNIGTKSPTEAFMTTEELAHVSKTIYAKNKFLDQPNTTMSPSFKTMELNISASEETAENQNVKTYLGMGSISRPLTYPYTTVLIGEKVVLPSPEPENKLSESVTNPVEPKCIKQFNVIKKYVPQGKLSPDLPENENYCYEETLNNVKNITTTPNRTLPTLKINDVVITAESVSDIRKRKFSITEFPHKNKIQKNDEVMDLSMANNQEKLNGTLVNEVVNNFRLTESEKNVANEIFNALQKPQSPPRLEINEDREEIPIYNNNNNNNNSTVIILRSLSADTQDQHQNYNEEPGNNTDYDNSAMETLADVATKQVKLEKNTLAKSVASEFLKLATKNENIDGGINTVNFGPVNKDVNDIIVKSEGNKSCTICSKSFNKPSQLRLHMNIHYLERPFRCDSCSVSFRTKGHLQKHERSASHHNKLSSSPALSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIQRLECLKKLPFGLYAELERSNSLLTEINTCDGDQCLESLKTLAKKVFVNHPNKLNEIEQRETIMADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -