Dcar008565.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- ncor1
- Assembly
- GCA_029229535.1
- Location
- CM055255.1:30578743-30595180[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-08 3.7e-05 24.2 0.0 3 43 456 496 455 498 0.97
Sequence Information
- Coding Sequence
- ATGGCTCGGAgACCTAACCATAGCAGCCAAACGGCGACGCATTCGGGCGCCGACATTTATAAGCCAGCCAGATCCCCTATTTCGAATGCAGCCGCTCGTTATCCCTACCCTTCGTCACCTCAGCTGCAGCAACCGCCCCAGGCCGCACCTCCACCTCAACGATATCAACCCCAACAACTCCCACAGCAACAACAACCACAGCAACCATCGGTCACTCCGGTGCCGGTGGCAGTATCGCAACCGGCACCACAGCCCATCATCTCAAATGTCTTCCATCGCGACTACCGCCAGAATAGGATATCACTGTTGCATCCGGAATACGGATCCGGAGGTCGGCATAGGGATCAGCTGCAATCCGTCCAGCAGCCACCTCCGACAATGGTCTGTGTCGACGGAGGCATCGGTGGCATCGGTATTGGAGGTCCTGGTGGCGGTGGAGGATTCTCGAGCGGCCAGCAACCGCTGAAGAAAATGAGACTTCAAGATAAGGAAGGCGTACATCAGCCATTGAGGATAGATACTAGGCCGGGAACGTATAATCCGCAAGTGGAAGCGATATCACCGACGTTCCCCGATCAACTAACTCAGGATGACCAGGCATTCCGAACAACAAAAGACGAACTCATCCAACAGATCGGAAAAGTAGATAGAGAAATCGCAAAAGCGGAATCGCAGATAGTTATACTTAAAAAGAAACAAGCAGAATTGGAAGAAATCGCAAATAAACCGGCTGTTAAGTCTGAAGTGCAAGAAGATACGACACCGAAACATCAAAGTTTACcacagaaaatctacgcggaaaatagaaaaaaggcTCAAAATGCCCATGCCCAGTTAGATGCGTTCGGTCCGAAAGTAGAATGGCCTTTATACAATCAACCCAGCGACGCCTCAGCTTATCACGAAAACAAAAGGAAGAATGTAACGTTCAAAAGGAGgcttttggaatatttcaaaaagagAAATTTAGAAAAGGAAACCAGAAATACCTATTTGACTGAAACTTATAGCAAGATGATGCAAGATTGGTTGAGAAAAGTAGATAAAATCGAATCAAGTACAAAAAGAAAAGCAAAAGAAGCTAAAAATAGGGAGTTCTTTGAAAAGGTGTTTCCGGAATTGAGGAAACAGAGGGAAGATAAAGAAAGGTTCAATAGAGTTGGTGCTAGAGTAAAATCTGAAGCTGACATGGAAGAAATTATGGATAATCTTCAAGAGCAAGCTCTAGAAGATAAAAAGATGCGTAGTTATGCCGTTATACCACCTATTCTTCTCGATCAAAgggaaaagaaaattaaatacgatAACCACAACGGTTATTTGGAAGACATGGAAGCGGTATATAAAAGTAGACAATTCCTCAACGTGTGGACTGCCAccgaaaaagaaatttttaaagaaaaatatcttcaGCATCCGAAAAATTTCGGTCTTGTAGCGTCGTATTTAGATAGGAAGTCAGTTTCCGATTGTGTACAGTACTATTATTTGAGTAAAAAGACGGAAAATTATAAGCAGTTGATTAGGAAAGCGAGGCAGAGAACGAGGAGCTCTAGAAACAACGCTCAGAAagttaatagtaatattaaCACGTCCGTCGTTGATATTTTAACAACGGGTGTTACTACCCGCCTCCAACGAGAACAGCAAGCAAGGACAGTGGTACAACCTTCGTCTCGAACCGAACCAGGCGGTAGTCAGCTGCAACCGCCAAATGGTGAACCAACCGCGTCGGCGGCTACTCCACCAACTGCGTCTACACCAACTCCTGCCGCTACGACGACTACGCCCACTACTTCATCGGTTGGGAGTCCTCCGGGCATGGCGACGACAACGCCTACAACGGCAGGCGCCATGCCCACAACTTCACCCACAACGGCCACCACTTCTTCGGAGATGGCGTCCATCAGCACTTCTGTGATTTCAAGTAGTACCAGCGGGGCATCTTCGGTAGTCGTTACGGCTTCCGTTGAAGGCGATCAAAATGCGGCAGCTCAAGAAATGATGTCCACGTCCAACACTCCTACCATTACGTCGTTAGAGGATGCGACGAAACCAAAGAATTTCCTCGGATTCTCCGGAACGCCAGTGCCTACGACGACAGCGTCGGATGAGTTAGCACCCTCGGGTAAAGGAATTTATTCTTCTGGTAATGAAGAGGGTATGAAGTTAGGTAACGGTAATACGAATGTAACAGGGACACTACCTGATGGCACCAAGCACGAAATTTCCACTGATGGAGTTAACGTAAAGAAAGAGATCGAATCTCCTCAGGAAACAATTAGTGATCAGAACATGACATCCAGTGGTACTTTAGGTGAAactaaaaagaagaaagaaagaagaaaagaaaaagattcCGTTATTGAAACTAGTGATGAGGAGACAAATAACAGGAATGaaGATATCGGTACGATCAAGACAGAATTCACAGTAGAAAAGATAGTAGCTAAAGTGTAA
- Protein Sequence
- MARRPNHSSQTATHSGADIYKPARSPISNAAARYPYPSSPQLQQPPQAAPPPQRYQPQQLPQQQQPQQPSVTPVPVAVSQPAPQPIISNVFHRDYRQNRISLLHPEYGSGGRHRDQLQSVQQPPPTMVCVDGGIGGIGIGGPGGGGGFSSGQQPLKKMRLQDKEGVHQPLRIDTRPGTYNPQVEAISPTFPDQLTQDDQAFRTTKDELIQQIGKVDREIAKAESQIVILKKKQAELEEIANKPAVKSEVQEDTTPKHQSLPQKIYAENRKKAQNAHAQLDAFGPKVEWPLYNQPSDASAYHENKRKNVTFKRRLLEYFKKRNLEKETRNTYLTETYSKMMQDWLRKVDKIESSTKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQALEDKKMRSYAVIPPILLDQREKKIKYDNHNGYLEDMEAVYKSRQFLNVWTATEKEIFKEKYLQHPKNFGLVASYLDRKSVSDCVQYYYLSKKTENYKQLIRKARQRTRSSRNNAQKVNSNINTSVVDILTTGVTTRLQREQQARTVVQPSSRTEPGGSQLQPPNGEPTASAATPPTASTPTPAATTTTPTTSSVGSPPGMATTTPTTAGAMPTTSPTTATTSSEMASISTSVISSSTSGASSVVVTASVEGDQNAAAQEMMSTSNTPTITSLEDATKPKNFLGFSGTPVPTTTASDELAPSGKGIYSSGNEEGMKLGNGNTNVTGTLPDGTKHEISTDGVNVKKEIESPQETISDQNMTSSGTLGETKKKKERRKEKDSVIETSDEETNNRNEDIGTIKTEFTVEKIVAKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735502;
- 90% Identity
- -
- 80% Identity
- -