Basic Information

Gene Symbol
RERE
Assembly
GCA_029229535.1
Location
CM055259.1:27616167-27643488[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 2e-05 25.1 0.4 2 46 122 167 121 167 0.95

Sequence Information

Coding Sequence
ATGGCGACTACTCAAGGAGAAATCAGGGTGGGTCCTGGTAACCAGGCTGTCCTTCCTGAATACCGTCCAAGTGTTCCGCCAGATCAGTTGTCACCAGATCCAGAACAGGTTCGGGTCCGCGAAGAACAAAGATGGGTTCCCGCTATGACACTAGATGCCGATTTGTTAATGTACCTTCGCGCTGCAAGGTCTATGGCTGCTTTTGCTGGTATGTGTGATGGTGGGTGTCCTGAGGATGGAGCCAATGCAGCATCGAGAGATGACACTACGATCAATGCTTTAGATGTGtTACACGATTCTGGATATGATCCAGGTAAAGCATTGCAAGCTTTAGTAAAATGTCCTGTACCGAAAGGGATCGATAAAAAGTGGAGTGAAGAGGAAACTAAAAGATTCGTCAAAGGTCTTCGACAGTTCGGCAAAAATTTCTTCAGGATAAGGAAAGATCTACTGCCTCATCGAGATACGCATGAACTggttgaattttattatttgtggaAGAAAACGCCCGGTGCAAATAACAATAGACCCCACAGGAGACGGAGACCGCCAGGATCACTGAGGAGAATTAGGAATACACGAAATAGTAGAGGAGGTAATACTTCATCTAATTCAGGGCGTAACGTTCCACCTGAAACTGAAAATAGCAGACCATCTCCACAACCCGGCAAAGAACCTGGAGAGACCAGTTCCGTTACTGAGGATGATAATGATAGTGAAGACGATAGTGACAGTAGAGAAGCGCAGTATCGATGTTCACATTGTTTTACAACACaTTCTAAAGACTGGCAACCTGGAGGCAAAGACCGACAACTATTATGTTACGAGTGCAGAGCTCACTACAAAAAGACAAACGAATTACCACCTGTCACAGCTCCAGCAGCTGGCGGAAATAATCTATCGGCAGAAAGTCCAGATGCAAGTCCTCAACGTATGCGCACACGAAACAAAGCCAAAGAACAAACCAGCAATCGTGCAAGACCGAAAAGAGGCGGGACAGAAACACCGGAACCTAAAACGCCAATAAAGACTAACCCAAACGCCGAAAAAACCACACCAAACCAAACGAGTACTCCAGGCAAAAAAAAGAAGTCAGATAAACCAGAAACcccaaataaaaacaaagatagTAGAAAAAGACCCCAAGATGTAAAATCAGAAGATAATGATATGGAAGAACGTGAACTTGGGTTACACAAAAAGAAAAGAGATAGAGCAGAAAGTCCATGTAGTCTTACCACCGATTCTGAAACTGTCAATGAAGATGTTGAAAATccagaaaatgaaaatgaaaatgtcGAAGTTGCTGTTCCATGTAACCTAATACATCCTGCAAATACAAATCTGCCTGCTACTATTACAACTACCCCTTCCACCATAACGTCTTCATTACCTCAAGAACAACTTTGTAAAGGACCAATAAAACAAGAGATCAGTGAATCACCTGACATCAAACCTCTTGCACTGTCACCTTCCAACAATCCAATTAATGCAGTAGCTAGTAATCCACCAAAGGCTCACATGGCAGAACCTATGCCACTCAACGTATCTATACGTCTTCCTGATGATATAAACGAGAGGAAGAAtcttataaaaagaaatttagacTCTTCAATGGAATCTAaagatattaaatttaatatagaaGGTACTAGTTTCAACCAGGACACCGTAAGATTCAATCcggaaaatatgaaattcgcTCAACAAACAGAATTCAAGAAGGAACCGGTTATTAAAACAGAGAAAATTGAAAGTGAAAGTACTGATGAACTTCCCAAAGAACATATTCCTCAGCAAGTTTCTGTGTTACAAGAAAAGAGCTTCAAAACTGAATTAATTATTCCCAGGATTCATTCTGCCAAAGAAGAAGATTCTTCAAATAACGATCTTATGGTAAAAGAAGAATCATCTTACAAAGACAATATTTTTATGCCACAGAATCTTATCAAAGAATCAATAACTTTCGGTATGAAAGATTCATCTTTAATGAACCACTTAGCAcctaaaataatgaaagaacCATCACAAGATAAACATAAAGACCAAATTGTCGATATGAACTCAGTGAATCATTTCACGGATATTAAACAAGAAACTTATAGTTACCAACCTCCTAAAGATTCCAATGCTACTACTGCCGTGACTATTAATAGTATTAATAATACTGTTATAAAATTGGAACCTAGGGAACCACGTGAGGAGCCGATGGAATTAACTAGTCAAAACAGGAGCGAACAACAACAACCATCCTATAaTACGCTTCCCCAACCCCTTAACATCCCGCAAGTTATACCAATGTCTCAAAATATTCCACCTAGTAACCATTATGAAGAAGAAAAACGATTAGAAAAGTTAGAACGACCAGAAAGAGTGGATAGACCCGACAGAATAGAACGACCAGAGAGACCTGATGTAGTACAGATAAATTCTACACCAATAGGACAACCCCCATTACCAAGTCTTATGCAATCTGGTAATCTAGTTACAATAGGGGGTTCCCAAGCACCACAAATAAACCACTACAGCTTCATGACTGGTCTGCCATTTTCTCATCCTCAAAGTCCtagaaacttggaaaaaaatcagtcTCAACACCAACAAAATGaacctcaaaatttgaaaatcaaacaAGAAATACCAGATGTACCCCAAAGTCAAAGCTCCTCAATGCCTCCTAATCATTTGAATGGTTTAAGCAGTTTTACGCAGAGTGCATTAGGCTCGGGACCTCCAGGACAACCTCCTCAAAGTTTAGCATTACCTTCCAATTCTCAGAATCTAGCAACAAATTTACCAACTTCTGGAGGTTTTGTGGCACCTCCAAATCATTTGCCTTCACCTATGGCAGATCCTCTTCAAAGTCTTAAAGACGTAAAGATTCCTGGCTACATTCCTCCTGCACAACACAGTCAATCCACCCAGTCAGCTAGTACCGAAAGAAGTGAACGTCCTTCTTCTGGTCCAGCGGTTGAGAATATTAAAAAGGAACCCGAATACATCAGATCTTCTAGTACCGGACCCAGTCCGAAACCCTTATCAGATAAATGTTCGACTCCCAAAAGTAGTAGCAATACTAACACTCCTACACCTGGAGCTCAACAGACACCTCCACCAATTAGACAACATGgtaCCAATTCACCACACTCAGCAATGAACTTGATTAGTCCGAGCTCGGCTCCTACCTCTTCTTTATCTCAACCTCACCCCACCCAACCTCACGGTTCATCATATGGTGGAATGCCTCCTCACCATCCACATCTAGTCCATCCTTCATTCCTCCAAATGCCATTCCATGGACCACATCCATATTCCGGATATCCTTTCTCTTACCCTTATCCATATCCTGTAGTACCTCAACCACATGCTGTTCCTCCTCCTACTAGTCGACACGATATTTCAGTTGCTCCTAAATCTATTGATACTGTCAGCGCCACCTTGATGTCTTCACAACATAGCACTAGTAGTACCTTAACTTCAAAGAGAGAAACAAGAGAATCCGACGAAAATGGTGGAGAAAGACATCAAACTCATGAAATGACGTTAACAAACCACCAAAGTACTTCACATAATAGTTCTGTACATGCAACTGTAGATAAGCACAATTATGGTAGTAGTCATAGTATTACAATTTCGCATAGTACTTCTACGAGTTCGAGTCAAAGTGTCCAGCATAAAGTCAATCAAAAAACGGTTAGAAGTAGTTCACCACATCCGCCAGTATCGCAGACATCATCGAGTTCAAGTATCAACCACACATCATCGAGCTCAACCAGTAGTCATCAGCATACCCATCATCACACACATACTCACCACGATCGTTTATCACCAAGTACTCAACTTTTACGTCACAGTATCCATAAACCTCCCACCCCTCAAACTGCAAACGCCCATCATTTAATGATACAACCACCAAATATGGGTCACCATCCATCCTCTCTGGAAGCTTTGAGAGCTCATGCTGCCCAAGCGGCTGCCAATATGCATCCGCCGTCTTCCCCAATGAATCCTCCAAAAATTATGTCTGACGAGGTCATTAAAGTAGAACCGGATCCAGAACCTTCTCCACCCGAGGACGAACCACAAAACAGTCCGATTGAACCTCCTAGAGGGCCATCACCTGAGCCTAGGATCGAAGATACAGAATGTCATAGAAGTCAAAGTGCAATatTTCTGCGTCATTGGAACCGTGGAGACTATAACTCTTGTACGAGAACAGATCTCACATTTAAACCTGTACCTAATTCGACGCTTGCTCGAAAGCGAGAAGAAAGACTTCGTAAGCAAGCAGATAGAGAACGCGAGGAAAGGGAGAGGGCACAACAAGCTCAACAGAGGAAAAATGCAACGCCAGAAAAACCAGACATTAAGCCACCATCTAGGGGGCCTTTGGAAACTGTCAGTTCTCCTTACGAAAGGTTCCCAAGACCTGGTTTCAATGATACACCTGCTTTGAGACAGTTGTCTGAATATGCAAGGCCACATGCTGGTTTTAGTCCCGgacACATGCCTAGGTCACTTATACCCCCTTCTCATGTCATGGATCCAATGTTGCAGTACCAGTTGAGTAGTATGTATGGACCCGGAGCAAGAGAGAGATTGGAATTGGAGCACTTAGAAAGGGAAAAACGAGAAAGGGAAATAAGGGAACTTAGAGAAAGAGAATTAAATGACAGGATAAAAGAGGAGATAATGAAAGGAGGTATGCGAGGACCTGCGAATCCAATGGATCCACATTGGCTGGAAATTCAAAGAAGATATGCAGCTGCAGGCTTGTCTGGACCTGTAGgtcCAGGAGGTCTTCCTCTTCACCATTTCGCCTTATACCCTGGTGGGGGTAGCGCCCCTTTATCGCAAATGGAAAGGGAACGCCTGGAAAGGCTTGGAATACCCCCACCACCAGCACCAGGTGCCCCAGGAGGTCCTCCTCCTGGACATCCACATCATCCAGCTCACCAGGCTCAGCTAGAGGCTGCTGAAAGATTGGCTCTCGCAACTGATCCTATGGTGCGTCTACAGATGGCGGGTATATCACCAGAATATCATGCCCACACTCATGCACATACGCATGCGCATACACACCTACATTTGCATCCTCAACAGCAGCAAGCTCAGCAAGAGGCAGCGGCAGCAGCTGCGGGTTTTCCACTACCAGCATCTGCGGCTCCAGGTTACCCTCGCCCCGGGTTGATTCCGAGCAGGGAGGGACCATTGGGATTACATCATCCTGACTTGTTGGGCAGACCTTATGCAGATCAACTGGCACATCAAGCAGCAGCTCATGAACAGTTACAAAGGCAGATGTTACTTGAACGCGATAGATTCCCTCCGCATCCTTCCATAGTTGCTCAGCACGAAGAGTACCTTAGgCAACAAAGGGAACGTGAACTCAAAGTGAGAGCATTAGAGGAAGCTGCTAGGGGCTCTAGGCAATAA
Protein Sequence
MATTQGEIRVGPGNQAVLPEYRPSVPPDQLSPDPEQVRVREEQRWVPAMTLDADLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTHELVEFYYLWKKTPGANNNRPHRRRRPPGSLRRIRNTRNSRGGNTSSNSGRNVPPETENSRPSPQPGKEPGETSSVTEDDNDSEDDSDSREAQYRCSHCFTTHSKDWQPGGKDRQLLCYECRAHYKKTNELPPVTAPAAGGNNLSAESPDASPQRMRTRNKAKEQTSNRARPKRGGTETPEPKTPIKTNPNAEKTTPNQTSTPGKKKKSDKPETPNKNKDSRKRPQDVKSEDNDMEERELGLHKKKRDRAESPCSLTTDSETVNEDVENPENENENVEVAVPCNLIHPANTNLPATITTTPSTITSSLPQEQLCKGPIKQEISESPDIKPLALSPSNNPINAVASNPPKAHMAEPMPLNVSIRLPDDINERKNLIKRNLDSSMESKDIKFNIEGTSFNQDTVRFNPENMKFAQQTEFKKEPVIKTEKIESESTDELPKEHIPQQVSVLQEKSFKTELIIPRIHSAKEEDSSNNDLMVKEESSYKDNIFMPQNLIKESITFGMKDSSLMNHLAPKIMKEPSQDKHKDQIVDMNSVNHFTDIKQETYSYQPPKDSNATTAVTINSINNTVIKLEPREPREEPMELTSQNRSEQQQPSYNTLPQPLNIPQVIPMSQNIPPSNHYEEEKRLEKLERPERVDRPDRIERPERPDVVQINSTPIGQPPLPSLMQSGNLVTIGGSQAPQINHYSFMTGLPFSHPQSPRNLEKNQSQHQQNEPQNLKIKQEIPDVPQSQSSSMPPNHLNGLSSFTQSALGSGPPGQPPQSLALPSNSQNLATNLPTSGGFVAPPNHLPSPMADPLQSLKDVKIPGYIPPAQHSQSTQSASTERSERPSSGPAVENIKKEPEYIRSSSTGPSPKPLSDKCSTPKSSSNTNTPTPGAQQTPPPIRQHGTNSPHSAMNLISPSSAPTSSLSQPHPTQPHGSSYGGMPPHHPHLVHPSFLQMPFHGPHPYSGYPFSYPYPYPVVPQPHAVPPPTSRHDISVAPKSIDTVSATLMSSQHSTSSTLTSKRETRESDENGGERHQTHEMTLTNHQSTSHNSSVHATVDKHNYGSSHSITISHSTSTSSSQSVQHKVNQKTVRSSSPHPPVSQTSSSSSINHTSSSSTSSHQHTHHHTHTHHDRLSPSTQLLRHSIHKPPTPQTANAHHLMIQPPNMGHHPSSLEALRAHAAQAAANMHPPSSPMNPPKIMSDEVIKVEPDPEPSPPEDEPQNSPIEPPRGPSPEPRIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLTFKPVPNSTLARKREERLRKQADREREERERAQQAQQRKNATPEKPDIKPPSRGPLETVSSPYERFPRPGFNDTPALRQLSEYARPHAGFSPGHMPRSLIPPSHVMDPMLQYQLSSMYGPGARERLELEHLEREKREREIRELRERELNDRIKEEIMKGGMRGPANPMDPHWLEIQRRYAAAGLSGPVGPGGLPLHHFALYPGGGSAPLSQMERERLERLGIPPPPAPGAPGGPPPGHPHHPAHQAQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPQQQQAQQEAAAAAAGFPLPASAAPGYPRPGLIPSREGPLGLHHPDLLGRPYADQLAHQAAAHEQLQRQMLLERDRFPPHPSIVAQHEEYLRQQRERELKVRALEEAARGSRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00792657;
80% Identity
iTF_00459420;