Dcar017620.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- dnajc2
- Assembly
- GCA_029229535.1
- Location
- CM055261.1:611032-613064[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.8 1.1e+04 -2.9 0.6 6 14 300 308 299 310 0.59 2 3 0.0014 1.8 9.2 0.0 3 31 436 468 434 472 0.85 3 3 5.4e-12 6.9e-09 36.2 0.1 4 44 549 593 547 595 0.91
Sequence Information
- Coding Sequence
- ATGGGAGAAGCTGCTATtggaaaaaacaatatttgctcTACAGTTGCAATAAGATATCGGTTCGTGTATGAGAATGTTGGCGGTGGTGAGCCCGAACTCCAATTTTCATCGCATcctttaattaaattacaagtCGAAGTACCTAAAGACGAGAACAAAGAAGAACTTCTACCCGAAAATGTAGAATACGAAGACGACGTTGCTTATTTACGTAGTCTCGATCCTAAAGAATGGAAATCGCAAGACCATTACAAAGTTTTGGGTATACCGAATTTGAGATATAAAGCTACAgacgaaattattaaaaacgcttatagaaaaaaagttttaaagcaCCATCCTGATAAACGAAAAGCTTTAGGGGAAGAAATAAAACCCGACGATGATTATTTCACTTGTATTACAATGGCTTATGAAACTTTAGGAAATGTAAATAGGAGGAGAGCATATGATTCGGTTGATCCACAATTCGATAACGATTTACCTTGTAATAGTGATATTAAAAAGGacttttttaaaacttttacaCATTATTTCGAACTTAATTCTCGATGGTCAGAAAAACCGAACGTACCCAAATTAGGCGACGTAAATTCTTCCAGAGAAGAcgtcgaaaaattttattctttttggtACGATTTCAAATCTTGGAGAGAATATTCTTACGAAGACGAAGAGGACAAAGATAAATGTCAAGATCGTGACGAAAGGAGataTGTGGATAAGTTGAATAAAGCCGATCGCTTgaggaagaagaaagaagaaatgtCAAGGATTCGACAATTAGTTGATTTAGCGTACAGCAACGATCCGAGAATCGCCAAATTCAAACAAGACGATAAAGATAGGAAATTAGCAGCGAAGAGAGCGAAACAAAACGCAGTTCAagcgaaaaaagaagaagaagagcgAATTTTACGTGAAGCGCAACTAGCTAAAGAACAAGCTGAAGCAGCGGAACGTGCTAAAATAGAAGCTAAAAGACAGGAACGTGAAGCGCAAAAGAAAGCCcttaaaaaagaaagaaaaacccTTAGGGATATTTGTAAATCGAACAATTATTACACCGAAGATGCGGAAGAAAATTTATCTCGTATGACAGCGATCGAAGGGATATGCGAGCGGTTATCTTTAAAAGAATTGgaagatttgaataaaaatttgaaaaataacggGAAAAGCGCGTTCCTTAAAGCGATCAAAGAAAACGAAGCGTTCTTACAAAAAGAACGATTGGAAATACTGAACGCTACTAAGAAAAGCGATACAGGAAATAACACCCCAGCAGTAGTTATGGTGGCACCGGATTGGAACGAAGATAACATACAGTTACTGGTAAAAGCGGTTAATCTCTTTCCTGCCGGTACCAATCAAAGATGGGACGTCGTGGCTAATTTCATCAACCAGCACGGTACTTTTTCGGAAAATAGTAACAAATTCAACGCGAAAATGGTACTATCGAAAGCGAAAGATCTCCAAAACAcggatttttccaaaaataatctaAAAGAAGTGGCGAACAAACAGGCCTTCGATAATTTCAAGAAAGATAAGAAGAACGTGCTGAACATCGGCGAATCggatatatcgaaaaaattggaGGAGGATAATAGGAAATCGGCGACGAACGGCGAAGTGAAAATTTGGACGACGAACGAACAACAATTGTTGGAACAAGCTTTGAAAACTTATCCGGCTTCGACGCCGGAACGGTGGGACAGGATAGCGGAATGTTTACCGGACAGATCGAAAAAGGAATGTATGAAACGTTATAAGGATTTGGTGGAAACAGTGAAGGCTAAAAAAGCGGCCCAAGCGGCCatcaacaaataa
- Protein Sequence
- MGEAAIGKNNICSTVAIRYRFVYENVGGGEPELQFSSHPLIKLQVEVPKDENKEELLPENVEYEDDVAYLRSLDPKEWKSQDHYKVLGIPNLRYKATDEIIKNAYRKKVLKHHPDKRKALGEEIKPDDDYFTCITMAYETLGNVNRRRAYDSVDPQFDNDLPCNSDIKKDFFKTFTHYFELNSRWSEKPNVPKLGDVNSSREDVEKFYSFWYDFKSWREYSYEDEEDKDKCQDRDERRYVDKLNKADRLRKKKEEMSRIRQLVDLAYSNDPRIAKFKQDDKDRKLAAKRAKQNAVQAKKEEEERILREAQLAKEQAEAAERAKIEAKRQEREAQKKALKKERKTLRDICKSNNYYTEDAEENLSRMTAIEGICERLSLKELEDLNKNLKNNGKSAFLKAIKENEAFLQKERLEILNATKKSDTGNNTPAVVMVAPDWNEDNIQLLVKAVNLFPAGTNQRWDVVANFINQHGTFSENSNKFNAKMVLSKAKDLQNTDFSKNNLKEVANKQAFDNFKKDKKNVLNIGESDISKKLEEDNRKSATNGEVKIWTTNEQQLLEQALKTYPASTPERWDRIAECLPDRSKKECMKRYKDLVETVKAKKAAQAAINK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436852;
- 90% Identity
- -
- 80% Identity
- -