Basic Information

Transcription Factor Domain

TF Family: COE
Domain: COE domain
PFAM: AnimalTFDB
TF Group: Helix-turn-helix
Description: This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.0067 34 3.0 0.0 304 336 6 38 3 43 0.92

2 4 0.002 10 4.8 0.0 303 336 53 86 44 91 0.93

3 4 0.002 10 4.8 0.0 303 336 101 134 96 142 0.93

4 4 0.0021 11 4.7 0.0 303 336 149 182 144 187 0.93

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.0067	34	3.0	304	336	6	38	3	43	0.92
2	4	0.002	10	4.8	303	336	53	86	44	91	0.93
3	4	0.002	10	4.8	303	336	101	134	96	142	0.93
4	4	0.0021	11	4.7	303	336	149	182	144	187	0.93

Coding Sequence: ATGGGACAAGATCGAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACGTCCTAAGGGCATATAATTCGAAATTGGGACATGATCAAATGCCGGAGAGGCATGTATATAGCCTTATCGACATCCTAAGTGCATATAATTCGAAATTGGGGTCGGAGAAACACGTATTTAGCCTTTTCGACGTTCTAAGGGCATACAATTCGAAATTGGGGTCAGAGAGGCACGTATATAGCCATATCGACGTTCTAAGGgcatataatttgaaattgggACATGATTAA
Protein Sequence: MGQDRMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDVLRAYNSKLGHDQMPERHVYSLIDILSAYNSKLGSEKHVFSLFDVLRAYNSKLGSERHVYSHIDVLRAYNLKLGHD

Sequence clustering based on sequence similarity using MMseqs2