Dcar001791.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- Jarid2
- Assembly
- GCA_029229535.1
- Location
- CM055252.1:36901589-36924956[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-22 8.2e-19 68.3 0.0 6 89 1523 1604 1519 1604 0.93
Sequence Information
- Coding Sequence
- ATGAAACGTAAGAGGAGAAATGTGTGCTCGTCACCTATACTTGATGATAGCCCTAAAAGgaCTAAAGTTCATGCCCAGAGAAAGTTTGCACAGGGTTCAAATGTCAATAGTCCAGTAATCACCCCAATACAAGAACTGGAAGCAGACAACCAGAAATCAGATAATTTACCAGAACCAGTGGAGCTGCTTCCAATAAAAAGACCAAATACTGAAGATTTTctcacatttttatgttttcgaGGTACTCCTATTCTTCCTCCcactttaaattttttcaatactgcTTCAATAGTTGATACAAATGGACAGGTTCATGAAATTAAAAGTGAAACATCACCTAAAAATGGACCCATTGATATTGCAAAATGTGGTTCTTCATCAGAGAAACCATTTGTTGCATTTGGTGTGCGTAAAAGGGCAGATCCTGTTGTAATCAGCCGTCAAATGGATAGAAAAAGGAGACATGCTCTCGCATTACAGGCGCTGCGACGAAAGTACCAAGAACAAAAAATGGCTAAAATTCGGGCGTTAACTATTAGTAAATTATCAGAAAAAGTAACAAATAAAATGTTAGTTCGAACAAATACCGTATCAAAAACGGAAACTATCACAAAGAAGACTAATACtgttcaaaaaacaaaagtagTGGCTACCAAACACATAAAAGTAACTACAAGAACATTGAAAACAACACTAAAACCAAAATTAAAGCAAAGCATGTGTCTCCGTAGTTTTAGAGGCAGGTTTATTCAACAAGAATTGCCGTTTAAAAGGAGAATGCTTGATAAACAAATTAGTAGAACACCATTAGAGAGAAAATCAGaatctaaaaagaaaaatgtcgaGTCTAAGAATACATTGAAACAAGACAAAGCAAGTTCATCTAAACAAGTAAAACCattgaagagaaaaattgtTACTTCAAACCCCGCAGCAGTTAAcTCAAGATTCACAAGATCAAGCTTAAGTAATACTAAATCAGAACTAAGAAGGAAGCagataaaaagaattttaattcCAAGCACCAATACTATCATTAAAACTAAACCGAGGTCTCTTAGATTAACTACCATGAAGAAAAGTGTATTGTCTCGTAGAAAGAACAATTCTTTGAAACTCAGACAAAAAATGAGAGCTGAACATCGACAACAAAACGTCGAAACAAACAAAAGCGAAAAATCTAAAAGAGACAGTAAAATGGTGGATAAGAAAGATGTCAAGCAAACAGTAAATAAGAATCTAGATGCAAAAGAATTAAATAGAAGTACAGAcataaaaaaagattataagAGAGTTACTGATCTGAAGAAAGAAGTAACTAAGACATTGGATGGAGATAGAAAACGGATTACTAGATCCGTCGATATCAAAAAGGAAGTTAATAAGTCAACCGATATCAAAAGAAAACCTCATCTAACAGAAATCAAAAGAAGCACCAGAGTTTCAAAcataatcagaaaaaaaattaattccactAAAAATCGCAATAAGGACATTGTGACTGTCAAGAGCAACAAAGCTGAGAAAAATAGAAGATCGATCAGAAAAAGTGACAATTTTAATAATGTTGATGatacagaaattgaaaaaacatcaaCTGAGCTCTGCGAACATGGAAAAAGTAaagagaagaaaatgaaaaatacatttacaCTTGATGAAAGTAaaataatatcagaaaaaaatataaaaaaatgcgaagaaaatgaaaaattaaaggaatcgatagaaaatattaatattaagctAGATGTTATCTCAGCACCAAAAGATGCAGTAAATAGGAAAGATAATGAACgagaaaataacaaatacatTTTGGAATCTTCAAACacagaagtttttaaaaaagatttacTAGAAAATGACTCAGAAGTTTCCGGTACCACagttaaattaacaaaaattattcaagattTAGAGGATATGGAAGTAAAAGATGCAGGAGTCGAAAAGAAAGTCTTGATTGAAACGAAAATAGAGGCTGATTGTAAAGAAGGCGATCCGTTACATCCACTTTCTATTCAAAAGGAAAATGTTGAATTAAAAGTAGATCCAAAATTAATTGTAGCAGATGTCCCAGAACAAACAATCAATGAGCAACAAAACGTTGTGGTAACAACAATCCTATCAACGCAAGATgaagaacaaataataaaagaaacaatttttgttcaagAAGATAAtgagatttcaaaaaaatcaaaaagggaTACCAAAAAACATATCAAAGACAATATccacaatagaaaaataatcgatCATGAAGAAAGCGTCGCTCCAAAGTCTCAACGGCCCTctagaaaaacaaaagaagCTGCTGCCATTTATATGGAGATATTGAGTCACAAATTAGTTAACGATGATAAAGTAGACGACGATGATACAATTTCAATCGATAGTTTTCCCGAGCTTCCCAATGTTAAAAGGACCGAACAACGAGAAATAGAACTAAAAGCGAAAGTTAAAATTTCCAAAGATAAAATCAAACAATCAAAGTTAGTAGAACTAAAGCATGTTCAATCAGATGCGCACGCAAAAGACACAAAAATGTACGTAATGAAGAGagaaaatgaaaacattgatgGTATTTCCATGGAAGAAAACATTAAACCGAAAAGGAATTCATCTAAAGCTTTTAAAAAGAAACAGGGAATCGAAAATTCAATTGAGACGGAagaaatttcatcaataaaatcTGATATTTCTCAAACAACAgaaattctacaaaaatcaGATCCTTTACAAATATCTGAGGATGTTGAAAAGTCTGTTGGAGTAAGATTACGTAAATCAGACCAAAAAATACCAGAAAGTAACGATTATGTTAAACCCAGAAGATTAACAAGACATTCACTACTTCCCCATGTAGATGATGATTACGATTCTGATGAATCATTCCATATCAATGTTAAAGTACctagaaaaaagaagaataccAGAAGCAGAGTTTCATCGCGAACAACAAAAGgtACAAGGCAGCTGAAACTCTCCTCAAGTGAATCTGACCAATCCACCACATCTGATGTCAATATTCAACCATCTATGAAcaaatttaaaagtaaaaaatattcaaaaacgaAATCGATGAAAGTTGATAATTTGAGCGAAACTGATAATGAACTGAGCGATAAGTGCCAACAACGAAAAATTGCAGAAGAAATCGTCAAAGATGCTCCGAAATCGAAGAGAAGCAATAATCAAAAATCACCTAAATCCTCTAATAAAggagataatttgaaatttagaaatttacaaaacaaaCCAGATTCAGATTGTGTAAGAATCGAACCGAAGCCAAAGAGAGAATGCGCTAAATTGCCGCAAAATTATCTTCCTATGTTTTCCTCTTCTGACGAAGAGGAAATATTTCATGGGtttgatgaaaaaactactaaaaatacaaaaacctGCGAAACCGCTTGCACTCATGCACCgcctttattagattttttgaaCAAAGATTTAGGGAGACGCTTTGGCAAAGAAaaagtgaatatgtcaaatgaacaaatagaaaaatggtTAAAGGATGCAGCGTTAGCAGGTAACAGCATCAAAAAGGAGAAcgacgaaatgttgaaatttggcGAAAGAATACCAACAGAAACAAATTTGGAAGTTGCAGATACTACCGATACGGAAAAACTTGAGCAGTCATCAGAATTAGATAATCCAGATGAAGATGCAAAAGATCCGAAGATAAATTCTAAAATCAGTACAATGATCAAACCCTATATTTCTAAGATGCCGGAATGTATCAAAGCACAGCTAGACAGAAAACTCATATTTCgtaaaagtaaaataaacaaCATTCCCAACGTAAACGCATTTTCTCCTGAAAATGAGAGCAGTGTATATGCATTCGgtgaagaaaatgaagatgttATCAGCACGCCATTCAGAAGACCATCTAGAAGACCTTCAAGTACCGCTACTTCAAAATCTGAGGATGAATCTGGTAAACATGACGAAATTGCAAAACAAAATCAGTTTCGAAAACCTACTGCAAAACAAGAAACACCAAAGGTAGCTGGAGTGGCGAAAGATGAACAAGACTCTAGTatagaaactgaagataaacaattttatgtACCTCAGAAACCAACTACTAAAACGACACTCTTAAAAAATCAGAGCAAACCTTTGTTTAAATCGAAAAGTTCGGAAAAATTGCTCGATACGGatgaaatcaaatataaaataccaAGTTCTCCAAGCGCTAGTTCATCTTCCAGTGCTAATTTGTATAAACGTCAACCGCAGAAAATTAAATGTAGATCTAACGATTTTATTTCACCAATTTATGTTTCCGATTTTCCCAAGCAAATCGAACCGGCTAAATTGGTAGAAGCCCCCATATTTCATCCAACTGATCAAGAGTTTCAGGATCCTTTGGAGTACATTGAAAGAATACGACACAAAGCCGAACAATTCGGTATATGCAAAATCGTTCCTCCGAGCAGTTTTAAACCGGAATGTAAAGTAACTGATGATATGAGATTTACAGCATATAATcagtatattaataaaatgctGTATCGATGGGGTCCGAATTATAAAGAATTAATGGCTATTAAAAAGTATCTCGAAACTCAAAATATAGCTTTGAATCATCCCCCTTGGATTGGTGGTATGGAAATTGACTTGCCGAGACTTTATCAAACTGTACAGAGCCTAGGTGGTTTGAGAGAAGTaatcgaaaagaaaaaatggCCCAAGGTTTCGGATCTAATGAAAATACCGAAATCAGCACAAGATCGTGTAACCAAATTAGATGATATATATTGCAAATATTTGCTACCTTATGACATACTATCGCCAGCCGAAAGAGAGAAACTTTTCAATGAAGTAGAAACCGAATGGGCTAAAAAAGAATCGAGATTATTATCAAAAGCACAGAATCAGAAATTAAATGACGAAAATACATCTACAACAGAATTCGATATGGAAGAGAACGATTCTGAAGAGTGTATTACAAAGGGTCGAAACATGGCTTTAAACGCATTTTTCAGAATAGCCAGAAATACGATGAGTATGTATTTCAAAACTAGTGAACCATCACCACAAGAGgtTGAACAAGAATATTGGAAATACGTGACAATGAGACAGAATCACATTTGTGTTCATTCAGGATCGATAGACTGCGGAAACTGGGGTTATGGATTTGCTGTATCAAAAAATAGTCCATTTGCTAAACATCCATGGAATCTCAAAGTTCTCACTAATAATAGTGGTTCCGTTCTTAGATGTTTGGGACCTGTTATGGGAGTGACAGTACCTACCCTTCACGTGGGCATGATATTTAGCGCATGCTGTTGGTATCGAGATCCACATGGTTTGCCATGGATAGAATATCTTCATACAGGCGGGAGTAAAATATGGTATGGTATACCAAATTCTATGGGTGAACAATTCCATAATGCATTAAGCAAATTAACTCCTAGCTACGTCAAGGACAAAGAATTGTGGTTACCGTCAGATACAGTCATGGTGCCACCAAATCTGTTAGTTGAAAATCAGGTATCTCTATGTCATACTGTTCAAGAACCAGGACAATTTATTGTGGTATTTCCCAAAGCTTTTACATCAAGTATAAGTACCGGTTATGTAGTCTCCGAAAGCGTTTATTTCGCCCCAATTTACTGGTTAAAAACGGCAAACCATCTGTTTAACGCTTTAAAACAGAGTAACGAACCTGCAATGTTCTCATTTGAAAGACTTGTTATAAATGTTGCTAATGATTCAAAATGCagcattgaaattattagacAAGTCATACCTCTACTACAAGAATTATGCAACAAAGAAATCGATAGAAGGAAACATTTGTATAGTTTTGGAGAAGCTATTAGAGAAAGACTACCGATACCTGAAATTAATcgaggaaaaaaaaagaaatttcaggGAGAAGAAGGGGATTATGAATGTGAAATTTGTGGGAGCAGCTTATTTTTGTCAATGATTTTCAATACCGTGGAAGGTATCACTTATTGTTTGGATCATGCGAGGGATATGATAGACAAGAAAACATTAGATATTAGTCTCTGCAAGTTTATGTTTACTTATGACGATGAAGAATTGGAAGCTTTACCGGAAAGAACAAAAACcaatttggaaaatagactacagaaaaaaatttcgaataaatttaGTGGACTACCCACTCTTCTTGGAaagtaa
- Protein Sequence
- MKRKRRNVCSSPILDDSPKRTKVHAQRKFAQGSNVNSPVITPIQELEADNQKSDNLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPTLNFFNTASIVDTNGQVHEIKSETSPKNGPIDIAKCGSSSEKPFVAFGVRKRADPVVISRQMDRKRRHALALQALRRKYQEQKMAKIRALTISKLSEKVTNKMLVRTNTVSKTETITKKTNTVQKTKVVATKHIKVTTRTLKTTLKPKLKQSMCLRSFRGRFIQQELPFKRRMLDKQISRTPLERKSESKKKNVESKNTLKQDKASSSKQVKPLKRKIVTSNPAAVNSRFTRSSLSNTKSELRRKQIKRILIPSTNTIIKTKPRSLRLTTMKKSVLSRRKNNSLKLRQKMRAEHRQQNVETNKSEKSKRDSKMVDKKDVKQTVNKNLDAKELNRSTDIKKDYKRVTDLKKEVTKTLDGDRKRITRSVDIKKEVNKSTDIKRKPHLTEIKRSTRVSNIIRKKINSTKNRNKDIVTVKSNKAEKNRRSIRKSDNFNNVDDTEIEKTSTELCEHGKSKEKKMKNTFTLDESKIISEKNIKKCEENEKLKESIENINIKLDVISAPKDAVNRKDNERENNKYILESSNTEVFKKDLLENDSEVSGTTVKLTKIIQDLEDMEVKDAGVEKKVLIETKIEADCKEGDPLHPLSIQKENVELKVDPKLIVADVPEQTINEQQNVVVTTILSTQDEEQIIKETIFVQEDNEISKKSKRDTKKHIKDNIHNRKIIDHEESVAPKSQRPSRKTKEAAAIYMEILSHKLVNDDKVDDDDTISIDSFPELPNVKRTEQREIELKAKVKISKDKIKQSKLVELKHVQSDAHAKDTKMYVMKRENENIDGISMEENIKPKRNSSKAFKKKQGIENSIETEEISSIKSDISQTTEILQKSDPLQISEDVEKSVGVRLRKSDQKIPESNDYVKPRRLTRHSLLPHVDDDYDSDESFHINVKVPRKKKNTRSRVSSRTTKGTRQLKLSSSESDQSTTSDVNIQPSMNKFKSKKYSKTKSMKVDNLSETDNELSDKCQQRKIAEEIVKDAPKSKRSNNQKSPKSSNKGDNLKFRNLQNKPDSDCVRIEPKPKRECAKLPQNYLPMFSSSDEEEIFHGFDEKTTKNTKTCETACTHAPPLLDFLNKDLGRRFGKEKVNMSNEQIEKWLKDAALAGNSIKKENDEMLKFGERIPTETNLEVADTTDTEKLEQSSELDNPDEDAKDPKINSKISTMIKPYISKMPECIKAQLDRKLIFRKSKINNIPNVNAFSPENESSVYAFGEENEDVISTPFRRPSRRPSSTATSKSEDESGKHDEIAKQNQFRKPTAKQETPKVAGVAKDEQDSSIETEDKQFYVPQKPTTKTTLLKNQSKPLFKSKSSEKLLDTDEIKYKIPSSPSASSSSSANLYKRQPQKIKCRSNDFISPIYVSDFPKQIEPAKLVEAPIFHPTDQEFQDPLEYIERIRHKAEQFGICKIVPPSSFKPECKVTDDMRFTAYNQYINKMLYRWGPNYKELMAIKKYLETQNIALNHPPWIGGMEIDLPRLYQTVQSLGGLREVIEKKKWPKVSDLMKIPKSAQDRVTKLDDIYCKYLLPYDILSPAEREKLFNEVETEWAKKESRLLSKAQNQKLNDENTSTTEFDMEENDSEECITKGRNMALNAFFRIARNTMSMYFKTSEPSPQEVEQEYWKYVTMRQNHICVHSGSIDCGNWGYGFAVSKNSPFAKHPWNLKVLTNNSGSVLRCLGPVMGVTVPTLHVGMIFSACCWYRDPHGLPWIEYLHTGGSKIWYGIPNSMGEQFHNALSKLTPSYVKDKELWLPSDTVMVPPNLLVENQVSLCHTVQEPGQFIVVFPKAFTSSISTGYVVSESVYFAPIYWLKTANHLFNALKQSNEPAMFSFERLVINVANDSKCSIEIIRQVIPLLQELCNKEIDRRKHLYSFGEAIRERLPIPEINRGKKKKFQGEEGDYECEICGSSLFLSMIFNTVEGITYCLDHARDMIDKKTLDISLCKFMFTYDDEELEALPERTKTNLENRLQKKISNKFSGLPTLLGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -