Dcar020394.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- grh
- Assembly
- GCA_029229535.1
- Location
- CM055263.1:9396860-9410973[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-46 1.2e-42 146.2 0.3 85 221 1 133 1 135 0.96 2 2 0.09 7.6e+02 -0.3 0.0 36 68 322 353 302 362 0.80
Sequence Information
- Coding Sequence
- ATGTTTCGAGAAGAAAAGAGTCCTGAAGATGAAATTAAAGCCTGGCAGTTCTGGCACGGTCGACAGCATTCTGTAAAACAACGAATATTGGATGCAGaTACGAAAAACAGTGTAGGTTTAGTAGGTTGTATCGAAGAAGTAGCTCATAATGCGATAGCAGTATACTGGAATCCCCTAGAAAGCCCAGCAAAGaTAAACATTGCCGTCCAGTGCTTAAGCACAGATTTTAGTAGTCAAAAAGGAGTAAAGGGACTACCTCTTCATTTACAAATAGACACTTACGAAGATCCCAGGGATTCACAAATTTTCCACAGGGGTTACTGCCAAATAAAGGTTTTCTGTGATAAGgGCGCAGAGCGAAAGACAAGAGACGAAGAAAGGCGAGCAGCCAAACGTAAAATGACAGCTACTGGGAGAAAAAAATTGGACGAGTTATACCATCCCATGTGCGAAAGATCAGAATTCTATACAATGAGTGATCTCACAAAGCCTCCTGTACTATTTTCACCAGCAGAAGATATCGACAAACTGACTTCGATGGAACTGCAAGGTTTTTATTCACAAGAAGATGGTTCTCTCAGTGGTCCAGTAGATCACGTGAAAACATCAGGTTCTCCTTTTCTTCTGCATACAGCTTCGAAACCTCCCACCACACCAACCCTCAAATTCCACAACCACTTTCCCCCGGAAGCAGACAAAAAGGATAACAGTATATTAGACAGTAGTTTATCCTCGGATGGAAATGTCTTTTCTCCGCCAATTAAAAGGACTAAATTGATGGGAGGTCCAGGTGGAACAGGGCCTCCACCATTGAGTGAGAGGGTGATGTTGTATGTACGTCAAGAGAATGAAGATGTATATACTCCATTACATGTTGTTCCTCCTACTACGGCTGGACTTCTAAATGCAATTGAGAATAAGTACAAAATTAGCACTTCAAGTATAAATAACTTGTATCGCAAAAACAGAAAAGGCATTATAGCCAAGATTGATGATGATATGGTTGCGTACTACTGCAATGAAGATTTCTTCTTGATAGATTTGAAAGCAGTGGACGAAGATATTTTCGACATTACTCTTGTGGAACTGATGAACCACTAA
- Protein Sequence
- MFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESPAKINIAVQCLSTDFSSQKGVKGLPLHLQIDTYEDPRDSQIFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPMCERSEFYTMSDLTKPPVLFSPAEDIDKLTSMELQGFYSQEDGSLSGPVDHVKTSGSPFLLHTASKPPTTPTLKFHNHFPPEADKKDNSILDSSLSSDGNVFSPPIKRTKLMGGPGGTGPPPLSERVMLYVRQENEDVYTPLHVVPPTTAGLLNAIENKYKISTSSINNLYRKNRKGIIAKIDDDMVAYYCNEDFFLIDLKAVDEDIFDITLVELMNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841608; iTF_01441700; iTF_01277446; iTF_00845642;
- 90% Identity
- iTF_00392521;
- 80% Identity
- -