Basic Information

Insect: Dione vanillae
Gene Symbol: stc
Assembly: GCA_037178615.1
Location: JAZFAU010000084.1:227630-241188[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 3.7e+04 -4.3 1.6 15 19 493 497 492 497 0.81

2 14 0.049 9e+02 1.0 1.4 2 10 525 533 525 533 0.92

3 14 3.7e-05 0.68 11.0 18.1 4 19 541 556 539 556 0.93

4 14 3.9e-07 0.0072 17.3 14.8 1 18 592 609 592 610 0.99

5 14 0.94 1.7e+04 -3.1 0.3 8 11 615 618 614 618 0.86

6 14 5.4e-05 1 10.5 13.6 1 19 651 669 651 669 0.99

7 14 1.4e-05 0.26 12.3 11.8 1 19 710 732 710 732 0.88

8 14 2 3.7e+04 -4.7 1.7 6 10 762 766 762 766 0.95

9 14 0.0019 36 5.5 7.3 1 11 772 782 772 783 0.95

10 14 0.041 7.6e+02 1.3 0.8 3 10 786 793 785 793 0.91

11 14 3.7e-06 0.068 14.2 14.0 3 19 801 817 799 817 0.92

12 14 0.00039 7.2 7.8 9.6 10 18 864 872 861 873 0.92

13 14 1e-07 0.0019 19.2 12.3 1 17 909 927 909 932 0.85

14 14 0.0001 1.9 9.6 6.0 1 13 939 950 939 951 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	3.7e+04	-4.3	1.6	15	19	493	497	492	497	0.81
2	14	0.049	9e+02	1.0	1.4	2	10	525	533	525	533	0.92
3	14	3.7e-05	0.68	11.0	18.1	4	19	541	556	539	556	0.93
4	14	3.9e-07	0.0072	17.3	14.8	1	18	592	609	592	610	0.99
5	14	0.94	1.7e+04	-3.1	0.3	8	11	615	618	614	618	0.86
6	14	5.4e-05	1	10.5	13.6	1	19	651	669	651	669	0.99
7	14	1.4e-05	0.26	12.3	11.8	1	19	710	732	710	732	0.88
8	14	2	3.7e+04	-4.7	1.7	6	10	762	766	762	766	0.95
9	14	0.0019	36	5.5	7.3	1	11	772	782	772	783	0.95
10	14	0.041	7.6e+02	1.3	0.8	3	10	786	793	785	793	0.91
11	14	3.7e-06	0.068	14.2	14.0	3	19	801	817	799	817	0.92
12	14	0.00039	7.2	7.8	9.6	10	18	864	872	861	873	0.92
13	14	1e-07	0.0019	19.2	12.3	1	17	909	927	909	932	0.85
14	14	0.0001	1.9	9.6	6.0	1	13	939	950	939	951	0.95

Sequence Information

Coding Sequence: atgtCTCAGTGGAATAACTCGTACAATTACAATAATCAATACCAACCTCCTAACAATTGGAATggtgaatataataatcaatatgtAAACCAATCTTACTACCCTAATCCTAATAGACAATATGACCACAACAATCAGTATGTTAGCTTTGACGAATTTTTGTCACAAATGCATATATCAAATGTTCCACAATCAAATCatgctaattataataatatacaatatcaaaattatCCCAATACTCAGTTCAACAATGTACCTAATTATCATAATGGAGCAACAGCACATAATTCTCAATCAGAATATATGTATGCATCTAACACTGCCAGTTTTCCTAGTAATGAAGAGTCTTACCAACACAATATGCAAAACCAATATAATGTCAACCCAGTGAGCTCTAgtgaaaataactataataatgaaGTAGTTTTTAAATCAAAGTTAACACCAACAGCAACTGAATTTGTTCCTAAAAACTCTAAAGAAAAACCTGATAGTAAGAATAGCCCTATTAAGGAAATAGTGCAGGAATCAAGTTCATCAAGTACAATGTTAAGTGAATCATCTAGTAATTACTCTAGGCCATCAACTTCAACAAATTGGAGAGACAGACCCCAAAGTTCCCAACAAAGTAGCACGTCATCTTTTGTTGAAAACAATTCATTTCAAAAATCTAAAACTCAAGATGGATATAGCAAAAACCGAGAATCTAAATATGAATCTAAAAATCGTAATCAAGAATATCACAACAGCCATAATGGATCAATTAGTCATAGCTCTAAGAACAACAAAGACTCTACAAGCCGTCCCAACGAATCAAACCCCCGGAATCGTAAATCTAAAAATCGTTCAGTGGATAACAACCATGATGCAAACCATAGAAGCCATAATCATCCAGAGCATAGCAATAATCATAGATATCGTAGTAACGATTTAAATGTATACAATCAAGAAGCTAGAGGCTATCAAGATGATTCAAACTATGTCCATGAGGCAAATAACTATGAAGGGGGCCAATCAAAATATTCTAAGGCGAAAAACAAAGAGTCTGATTTAGGGCGTACTTTTTATAATAGCTCAATGCCTAAAGAAAGTCAGGATGTGAGAAATGGAAGAGGTCGTAAATGGGCTGGAAGTCAGCGAGTTAGAGCCACAGAATACAACTATGTTGAAGACGAACATTATGCAAATTCATATTTACATGTAAGAGAAGAGACAAACAGAGATAGTGTATCTAATAGTCCTTTAAAGGGAAAACAAAAATCTTCTATGTCAGGAGctttagtaAATACAGAAATGACACAACGTGAGCGTCTTAGTGAGCAATTGGATAAAGGAACTTTAGAATGTCTAGTGTGCTGTGAAAGAGTAAAGCAAATAGACCCAGTGTGGTACTGCGGCAATTGTTATCATGTGTTCCATCTTGCTTGTACAAGGAAATGGGCTATGAGTAGCATGGTTGAAAGCAAATGGCGCTGCCCGGCCTGTCAAAACACCAACCAAGTTGTGCCAACAGAGTACAGATGTATGTGTGGGACAGTACGCAATCCTGAGTACCAGAGAGGCTCTAGTGGTGCCCACACTTGTGGCAAAGCGTGTAAAAGACCTAGAAACTGTCCACATCCATGTACACTTTTGTGTCACCCTGGTCCTTGTCCACCTTGCCAGGCTACTGTTAGCAAGCAATGTGGATGTGGAACCGAAACCCGTTCAGTGCTCTGCAGCAGCAAGTTACCACAGGTGTGTGGAAGGGAGTGTCGAAAGAAATTAGAGTGTGGTGTCCACGACTGTACTAAGGATTGCCATGAAGGACCTTGCGACCCTTGCGGAGAGACTGTTACTCAAGTGTGCCACTGCCCGGCGGCGGTCGCGCGCTCCGTGCCGTGCACGGCGGCCacgggcggcgcgcgcgcgtGGTCGTGCGGCGCGGAGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCCTGCCACGCGCCGCCCTGCGCGCCCTGCCCGCTGCGGCCCGAATGCGTGCGCAGCTGCCCGTGTGGAGGTACCAGAATCGATAAAGACCAACGCAAATCATGCACGGATCCAATACCGCTGTGTGGTAACATCTGCACCAAGCCTTTACCCTGTGGACCTCCTGGAGACAAACACTTTTGTAAAGAAAGCTGTCATGAAGGTGCGTGTCGCGTGTGTCCCGACACCACGCTACTGCAGTGTCGCTGCGGACACTCCAGCCGGGAGGTGTTGTGCGCTGATCTCCCGGAAATGTACAACAACGTGTTGTGTCAGAGAAAGTGTAATAAGAAGCTGTCCTGCGGCCGGCACCGCTGCCGCGCGACGTGCTGCGCGGCGAGCTCGCACCGCTGCACGGTGGTGTGCGGCCGCACGCTGTCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACGGGACACTGCGCGCCGTGTCCCACCGTCAGTTTCGAAGAGCTCCGCTGTGAATGCGGTACAGAGGTGATCTGGCCGCCGGTTCGCTGCGGCACTAAGCCGCCCGCGTGCAGCGCGCcgtgccgccgccgccgcgcctgCGCGCACCCGCCGCACCACTCGTGCCACTCCGGCGACTGCCCGCCCTGCGTCGTGCTCACTACCAAGCGGTGCTACGGTGACCATGAGGAACGTAAAACAATCCCATGTTCCCAAGAGCAATTCTCATGTGGTCTTCCTTGCGGTAAGCCTCTGCCTTGTGGCAAGCACACTTGCATCAAAACATGTCACTTGGGCCCTTGTGATGCTGGCAAATGCACGCAGCCCTGCGCCGCGAAGCGTCCGTCGTGCGGGCACCCGTGCGCGGCGCCCTGCCACAGCGGCGCCGCGGCCGGCAGCGCCGCCGCGTGCCCCAGCGCCGCGCCCTGCCGCCGGCCTGTGCGGGCGACGTGCGCGTGCGGCCGCCGCGCCGCCGAGCGCGCCTGCTGCGACAACGCCAGGGACTACGCTAAaatgaTGAGTACATTAGCTGCATCCAAAATGCAAGAAGGTGGAACCGTTGACTTGTCAGATCCGCAACGTCCAGGAAATATGTTAAAAACGCTGGAGTGCGACGAGGAGTGCCTGGTGGAGGCGCGGTCGCGGCGGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGCGCGCGACCCCGCCTTCGCGCAGCAGGTGCACGACCGACTGAGCGAGCTCGTGCAACTGGCCAAGAAGTCAAAACAGAAGACACGTGCGCACTCTTTCCCCTCAATGAACCGTCAGAAGAGACAGTTCATACACGAGCTCTGCGAACACTTCGGCTGCGAGAGCGTGGCGTATGACGCGGAGCCGAACAGGAATGTTGTGGCCACTGCTGACAAGGAGAAGTCATGGCTACCAGCGATGAGTGTGCTAGAGGTGTTGGCTCGCGAGGCGGGCAAGCGCCGCGTGCCGGGCCCTGTGCTGCGCGCCCCGCcctccgccgccgccgccaccaAGTCATCCGGAGGCTGGGCCACACTTACATCTAACAACGCGTGGGCGGCGCGCAGTCAGACCAAACAGGAGCCTAAGATTGACTACTTTGACAATCCACCAGAAAACTGA
Protein Sequence: MSQWNNSYNYNNQYQPPNNWNGEYNNQYVNQSYYPNPNRQYDHNNQYVSFDEFLSQMHISNVPQSNHANYNNIQYQNYPNTQFNNVPNYHNGATAHNSQSEYMYASNTASFPSNEESYQHNMQNQYNVNPVSSSENNYNNEVVFKSKLTPTATEFVPKNSKEKPDSKNSPIKEIVQESSSSSTMLSESSSNYSRPSTSTNWRDRPQSSQQSSTSSFVENNSFQKSKTQDGYSKNRESKYESKNRNQEYHNSHNGSISHSSKNNKDSTSRPNESNPRNRKSKNRSVDNNHDANHRSHNHPEHSNNHRYRSNDLNVYNQEARGYQDDSNYVHEANNYEGGQSKYSKAKNKESDLGRTFYNSSMPKESQDVRNGRGRKWAGSQRVRATEYNYVEDEHYANSYLHVREETNRDSVSNSPLKGKQKSSMSGALVNTEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCGNCYHVFHLACTRKWAMSSMVESKWRCPACQNTNQVVPTEYRCMCGTVRNPEYQRGSSGAHTCGKACKRPRNCPHPCTLLCHPGPCPPCQATVSKQCGCGTETRSVLCSSKLPQVCGRECRKKLECGVHDCTKDCHEGPCDPCGETVTQVCHCPAAVARSVPCTAATGGARAWSCGAECGRVLACGAHVCRAPCHAPPCAPCPLRPECVRSCPCGGTRIDKDQRKSCTDPIPLCGNICTKPLPCGPPGDKHFCKESCHEGACRVCPDTTLLQCRCGHSSREVLCADLPEMYNNVLCQRKCNKKLSCGRHRCRATCCAASSHRCTVVCGRTLSCQLHRCEEFCHTGHCAPCPTVSFEELRCECGTEVIWPPVRCGTKPPACSAPCRRRRACAHPPHHSCHSGDCPPCVVLTTKRCYGDHEERKTIPCSQEQFSCGLPCGKPLPCGKHTCIKTCHLGPCDAGKCTQPCAAKRPSCGHPCAAPCHSGAAAGSAAACPSAAPCRRPVRATCACGRRAAERACCDNARDYAKMMSTLAASKMQEGGTVDLSDPQRPGNMLKTLECDEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRATAARDPAFAQQVHDRLSELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPSAAAATKSSGGWATLTSNNAWAARSQTKQEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213096;
90% Identity: iTF_00457695;
80% Identity: -