Dvan020918.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- nfxl1
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000272.1:96104-98581[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.7e+04 -7.6 5.6 15 19 76 80 75 80 0.81 2 20 0.0093 1.7e+02 3.3 0.3 4 10 111 117 110 118 0.97 3 20 2.7e-07 0.0051 17.8 15.9 3 19 128 144 127 144 0.95 4 20 1.8e-08 0.00034 21.6 13.1 3 18 181 196 179 197 0.91 5 20 1.7e-08 0.00031 21.7 10.8 1 19 232 250 232 250 0.98 6 20 4.4e-06 0.081 14.0 19.6 3 19 287 303 279 303 0.86 7 20 1.1 2e+04 -3.3 0.4 7 11 307 311 307 311 0.84 8 20 5.9e-05 1.1 10.4 20.3 1 18 337 354 337 355 0.97 9 20 1.3e-08 0.00024 22.0 15.6 1 19 364 382 364 382 0.99 10 20 1.9 3.4e+04 -4.0 0.7 5 10 410 415 410 415 0.80 11 20 0.00018 3.4 8.8 6.4 9 19 430 440 428 440 0.89 12 20 0.038 7.1e+02 1.4 7.8 3 12 451 460 450 460 0.90 13 20 0.53 9.9e+03 -2.3 4.1 14 18 489 493 489 494 0.85 14 20 0.16 3e+03 -0.6 1.5 7 12 509 514 509 524 0.81 15 20 4.9e-06 0.09 13.8 4.6 1 11 530 540 530 541 0.97 16 20 0.71 1.3e+04 -2.7 1.3 15 18 555 558 554 559 0.84 17 20 0.00033 6.1 8.0 16.9 3 18 571 587 570 588 0.82 18 20 1.1 2.1e+04 -3.3 1.6 6 10 619 623 618 623 0.88 19 20 2.5e-07 0.0046 18.0 12.1 1 18 629 648 629 649 0.87 20 20 2 3.7e+04 -4.8 2.0 14 18 657 661 657 661 0.86
Sequence Information
- Coding Sequence
- ATGGCTCGAAGATATCGGGATGCTGCTGCTAAATTGCAGCAAAATGTACAGAAACACTTGCAAGTGATGAAAGATCTTTCTTCTTCGGAAGATGATGAGCCAGTTGAGTCTAGTGTTCCTAGAAACTGTGTTCCAGAGAAGTGGTCCAACGATAGTATAAGTCTGCGCAGTGAAGAAACTCATGGTCCAATAGCTGTGTTCATgcctaaaaaaattgaatggtGCTGCCCAAAGTGTAGAAATTCATACAATAAAGAAGAAATACCTCGTAAATATCGCTGTTTCTGCGGTAAAACTGACGACCCTCCTTTCCATCCCTGGTTAATACCTCATACATGTGGGGAAGTGTGTGGTAAAAGATTGTCAGTAGGTGATAACTGTAAACATAAGTGTCTTTTACTGTGTCATCCAGGACCCTGCCCTCCCTGTCCTCAAACTGTTAATGGTGCTTGCTATTGTAACAAGGAGCATAAGAGAGTAAGATGTAGTGCTGCACACTGGTCATGTAAACAGCAGTGTAGCAAAATATTGCCTTGTAAATCTCATAAATGTGAAGAGATTTGTCATGCTGGAGAATGTCCTCCTTGTAATTACACAAGTTTACAATCATGCCAATGTGGTGCAGAAAAAGCAAAACGCCCATGTAACAGTTTAATGTGGCAATGTCAAAAACAGTGCAACAAGCCATTTGCATGCGGTTTTCATAAATGTGAGAGAATCTGTCATAATGGAAGCTGTGGACTTTGCCCCAATTCTGGAGTCAGGTCATGTCCCTGTGGTGCGATTCAGCGTTACATTCAATGTCCTGATACAATTGAAACATGCCTTGGCACTTGTGGTAAGAAACACGAGGACTGTGAACATAACTGCCCAGCTAAGTGTCATAAAGGGCCTTGTCCGCCTTGTCAAGTGCAGATTGAAAAGAAATGTCATTGTTTAACTCATACCAGGCCACTGCCCTGCAGTAAAGATTTTAGATGTGAAACCAAGTGTAGAGGTATCAGACCTTGTGGCAAACATGGCTGTGGAAGAAAATGCTGTAATGGCAACTGTCCTCCGTGTGAGAAAATCTGTGATAAGTCTTTGCAATGTGGCCGTCATAAGTGTACTATGATTTGCCACCATGGGCCTTGCTATCCATGTCCTCTTGAATCTAAAGTCACTTGCCGCTGCAAAGAGACATACATAACAGTTCCTTGTGGAAGAGAGCGGCATACAAGACCTCCAAAATGCAATCTTCCATGTAAACTAAAATACAAATGTGGGCACATAGATGAAAACAAACATTCTTGTCATTTTGGTGATTGCCCTCCATGCAAAGCAATTTGTAACAAGTCTTATCAGAAATGTGAACATAACTGTACAGCAACATGTCATGAATATGTACTGGTTACATTCAAACAAGTAGAAAAACCTGCAACACCCTGGGAAGCTCAACCACCAAAGTCAAAAATAGTTGCATTACAATGTCCACCTTGTGAAGCTCCTGTCACAGTCACATGTTTTGGAGAACATGAATCAGATGAACAGCCTTGTCATAAAGCTGGCCGTCGACCATGTGGAAGAGAATGTGGTAAACCACTGATTTGTGGAAACCATTCCTGTGAATTATTATGTCATTTATATAATCAAGATCCTGATTATCCTAATGTGCCTTATACATGTAAACCTTGCAACAGAGAGTGTTCTAAACTCCGTCCAGACAAATGTACACACAAATGTGCCAAGCGAGGCTGCCATCCTGGTCCATGTCCACCCTGTGAGATCATGGAGAGGGTTTCGTGTCACTGTGGTGTCACAGAATTATATTTCCGCTGTAAAGAATTATCAAACACAAATGAGGAAACACTAAGTTGTAAACAAACATGTCCAAAGAATTTAGAATGTGGGCAtcgttgtaaaaatatttgtcattctGGACCATGTGGAGTTAATCAAACTTGTACTAAAAAGACTAAAACTCACTGCCCTTGTGAAACTTGCTGCCAAATTAGAGAAAGAACAAGCAAGGAGATGAGACTAAAGCAGCTAGAGGAAGAAAAAAACCGTAAAGAATTAGAAGAATATGAGTGGAAATTGAGTggtaagaagaaaaaatataaagaaaagaaagttATTGTCAATCGAGACCACAGAAATGTGTTTCAGAAATATTGGCTCCCTATTTTATCGACAGTGGTTGTAACTTTAGCtgctatttattacattttttacatttag
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQVMKDLSSSEDDEPVESSVPRNCVPEKWSNDSISLRSEETHGPIAVFMPKKIEWCCPKCRNSYNKEEIPRKYRCFCGKTDDPPFHPWLIPHTCGEVCGKRLSVGDNCKHKCLLLCHPGPCPPCPQTVNGACYCNKEHKRVRCSAAHWSCKQQCSKILPCKSHKCEEICHAGECPPCNYTSLQSCQCGAEKAKRPCNSLMWQCQKQCNKPFACGFHKCERICHNGSCGLCPNSGVRSCPCGAIQRYIQCPDTIETCLGTCGKKHEDCEHNCPAKCHKGPCPPCQVQIEKKCHCLTHTRPLPCSKDFRCETKCRGIRPCGKHGCGRKCCNGNCPPCEKICDKSLQCGRHKCTMICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTRPPKCNLPCKLKYKCGHIDENKHSCHFGDCPPCKAICNKSYQKCEHNCTATCHEYVLVTFKQVEKPATPWEAQPPKSKIVALQCPPCEAPVTVTCFGEHESDEQPCHKAGRRPCGRECGKPLICGNHSCELLCHLYNQDPDYPNVPYTCKPCNRECSKLRPDKCTHKCAKRGCHPGPCPPCEIMERVSCHCGVTELYFRCKELSNTNEETLSCKQTCPKNLECGHRCKNICHSGPCGVNQTCTKKTKTHCPCETCCQIRERTSKEMRLKQLEEEKNRKELEEYEWKLSGKKKKYKEKKVIVNRDHRNVFQKYWLPILSTVVVTLAAIYYIFYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -