Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000318.1:2496139-2499410[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00046 0.051 15.0 1.0 1 23 227 249 227 249 0.98

2 10 9.4 1e+03 1.5 0.2 3 23 274 295 273 295 0.84

3 10 0.00013 0.014 16.8 0.1 2 23 317 338 316 338 0.95

4 10 0.00012 0.013 16.9 1.5 1 23 342 364 342 364 0.98

5 10 0.001 0.11 14.0 0.2 1 23 371 394 371 394 0.96

6 10 6.7 7.4e+02 2.0 0.1 3 23 402 423 400 423 0.82

7 10 5.9e-05 0.0065 17.9 1.7 1 23 429 452 429 452 0.97

8 10 0.00013 0.014 16.8 1.4 1 23 458 480 458 480 0.98

9 10 5.7e-06 0.00064 21.0 0.9 1 23 486 508 486 508 0.99

10 10 1e-05 0.0011 20.2 3.6 1 23 514 536 514 537 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00046	0.051	15.0	1.0	1	23	227	249	227	249	0.98
2	10	9.4	1e+03	1.5	0.2	3	23	274	295	273	295	0.84
3	10	0.00013	0.014	16.8	0.1	2	23	317	338	316	338	0.95
4	10	0.00012	0.013	16.9	1.5	1	23	342	364	342	364	0.98
5	10	0.001	0.11	14.0	0.2	1	23	371	394	371	394	0.96
6	10	6.7	7.4e+02	2.0	0.1	3	23	402	423	400	423	0.82
7	10	5.9e-05	0.0065	17.9	1.7	1	23	429	452	429	452	0.97
8	10	0.00013	0.014	16.8	1.4	1	23	458	480	458	480	0.98
9	10	5.7e-06	0.00064	21.0	0.9	1	23	486	508	486	508	0.99
10	10	1e-05	0.0011	20.2	3.6	1	23	514	536	514	537	0.96

Sequence Information

Coding Sequence: atggcgGAGGGtaacataaagaaaaatcaaGGGCCTTTAATAAACCCCGGGCTGTGTCGTTGTTGtcgttcaataaaaaaatgtcgacTTCTTTCAACAGAATATGAGTTTATGGATACGAAAGAAGTTTATTCTGATATGATAGTGGATGTTTTTGGGCTAATTTTATCACACTTGGATGGTGATAGTAAAGACTGTTGTATTTGTGCCACTTGTGTGTCGCGACTTCGTGAAGCAAATGCGTTTAGGCAACAAGTTTTACAATCTGAGCAAATGTTCCTTGAAGCAAGATTGCAAAATAAGgaagaATTTAATCAAACAATAAAGACTGAGATAAAAACTGAGCCAGCCTGCGACTATGACACTCCTGATATGCCAAATGaactgccagaagatcaaaatGagGCAGATAATACAAATCTAGATATAGAAAGAGTCACAGATAATAAACCCATAGAATtgaaaaaaacaagaaatggTCACAAAAGTAAAGTTAGCAAGCAACTGAGGAATAGTAAACGGTTGAGGGTGAAATTGGACAAGTTGTTGATAACAAACGGTGTTTCCAACAAAATGGCGTCGAAAGACATAATAGACCACAACCAGATGGCGTACTCAAACACTGTGGCCATTGTGCAGAATTCCTATGTCTGTCCCTTCCACAACCGAGTCAGTATTTACTACTGCTACTATTGCAAGGATCAATTCACGAATCCCAGTGAATTAAGAGAACACACTCTCGTTCACGATCCGAAGGAACTCTTCGAGGATACAacagaaaataagaaaatcccCAAAATTGATATAACCAGGATAGATTGTCGACTTTGTCCGGACAAAATTGACGATTTGGAAACATTCAAAAAGCACATCACTAGTGTTCACGACAAACCCCTGTATCCCATCACTAACGAGTTCCTCAAGTTTAGATTGACGTTAAATAATTTGACATGTACAGAGTGTGGCGGCGTTTTTCCATATTTTGATTcgttaaaaaaacatatgatcGACCATTTTGGTACGTTCACCTGTGATATATGCGGAACGTGCTTTCTAGAACAAGCTTCTCTTCGCACTCATATTAAATCTCACAGTAAAATCGATTTAAATTTCCCCTGTGAAATATGTGGAAAGAATTTGAAATCGAAATACAGCAGAACACTACACGTTGCGACAGTACATGAGAAGAAACCTTTCGTTAATTGTTACAAATGTGACGCCGCGTTCCTGTCATACGCTCTAAGGAACCGCCATTTGATAGAAGTTCACGGTGACAAAAGAACGTTTCCCTGTAAATTGTGCGATAAAGTGTATAACCGGAGGAAAACTCTAATGGAGCATAATAGACGGAATCATTTAAAAGTGTACAGACATCAGTGTGATTTGTGTGACCAAAGGTTTTATTTGCCGTCGCGTTTGAAGGAACATATGGCGACTCACACCGGTGAAAGAAACTATAGATGTGAATTTTGTGATAAAAGTTATCCTCGCCTCCAGTCGCTGCAGGAGCATGTGAGGAGTCACAGCAGTGAGAGGAGGTTCAAGTGTGATGTGTGCACTTCCACTTTCACACAGAGCGGTAGCTTGAAAAGTCACATGAAAAGTCACCACCAGGTGTTTGAAATGGATGGCAGTTTCAAATTGTAG
Protein Sequence: MAEGNIKKNQGPLINPGLCRCCRSIKKCRLLSTEYEFMDTKEVYSDMIVDVFGLILSHLDGDSKDCCICATCVSRLREANAFRQQVLQSEQMFLEARLQNKEEFNQTIKTEIKTEPACDYDTPDMPNELPEDQNEADNTNLDIERVTDNKPIELKKTRNGHKSKVSKQLRNSKRLRVKLDKLLITNGVSNKMASKDIIDHNQMAYSNTVAIVQNSYVCPFHNRVSIYYCYYCKDQFTNPSELREHTLVHDPKELFEDTTENKKIPKIDITRIDCRLCPDKIDDLETFKKHITSVHDKPLYPITNEFLKFRLTLNNLTCTECGGVFPYFDSLKKHMIDHFGTFTCDICGTCFLEQASLRTHIKSHSKIDLNFPCEICGKNLKSKYSRTLHVATVHEKKPFVNCYKCDAAFLSYALRNRHLIEVHGDKRTFPCKLCDKVYNRRKTLMEHNRRNHLKVYRHQCDLCDQRFYLPSRLKEHMATHTGERNYRCEFCDKSYPRLQSLQEHVRSHSSERRFKCDVCTSTFTQSGSLKSHMKSHHQVFEMDGSFKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00780468;
90% Identity: iTF_00780468;
80% Identity: -