Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000325.1:523561-524562[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0035 0.39 12.3 0.3 1 23 65 87 65 87 0.97

2 8 0.0042 0.47 12.0 2.5 1 23 113 135 113 135 0.98

3 8 0.00011 0.012 17.0 0.4 1 23 143 165 143 165 0.96

4 8 9.2e-06 0.001 20.4 0.3 3 23 173 193 171 193 0.96

5 8 5.1e-06 0.00057 21.2 4.5 1 23 199 221 199 221 0.99

6 8 0.00038 0.042 15.3 2.7 1 23 227 249 227 249 0.99

7 8 0.00084 0.093 14.2 0.7 2 23 259 280 258 280 0.96

8 8 3.6e-06 0.0004 21.7 3.2 1 23 292 315 292 315 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0035	0.39	12.3	0.3	1	23	65	87	65	87	0.97
2	8	0.0042	0.47	12.0	2.5	1	23	113	135	113	135	0.98
3	8	0.00011	0.012	17.0	0.4	1	23	143	165	143	165	0.96
4	8	9.2e-06	0.001	20.4	0.3	3	23	173	193	171	193	0.96
5	8	5.1e-06	0.00057	21.2	4.5	1	23	199	221	199	221	0.99
6	8	0.00038	0.042	15.3	2.7	1	23	227	249	227	249	0.99
7	8	0.00084	0.093	14.2	0.7	2	23	259	280	258	280	0.96
8	8	3.6e-06	0.0004	21.7	3.2	1	23	292	315	292	315	0.97

Sequence Information

Coding Sequence: ATGGAGACAAAGTCTGGCGTAGGAATCACCGACCACTGGATGAAAATTATGATGGAGCCGGCCGGTAgcgacaaacaaataaataacctGCAGAACGACAACAGATCATCGGTGAAAAGCGAAAAAATGGCAGAAGCATATAACGGACAAGACAACAACATTACTTACGAGCTGAAACAAGCCGAGGTGAGGTATCGTTGCGACGTATGTGACCTGGCGTTTAACGGTATGGAGCTTCTGATGTTGCATAAAAAGTTCCACGGCAACGATAAAGATATGCCGCCGATGGAGCCCGAACCACCCGTTGTGAAGGAAGGCCCCAAGAAGCGTCGGAAATTCAAATGTGACCAGTGCGACGTGAAAGTTAATTCACAATACCATCTAGATATACACAAAAGTAAGCACGAAGGTAATGCGTCCAAGAAATACTTATGTCAGGTTTGCGACCGCAGCTTTGTAGCAGCACAGTTCCTAAAAAGCCACATGCAGTCCCACTCGGCGACAAGTACAATTAACTGTGaaatttgcaataaaaatttCACCGGACAAGCCTATCTCAAACTACATATGCAACTACACAATGACATCAAGAAATTTAAATGCTCTAAATGCGATGAGATGTTCCCAACGAAAAATTGCTTGAAAATCCACATGAAGAAGCATACAAAAGTGAAAAATTTCAAATGTGATTTTTGCCAGAAGTTATTTGTGTCTAAGATAACTATGGAGAAGCATCGGCAGACTCACGAGGGTCAGCCGGCCGATTGTCATGTGAAATGCCCTCAATGTGACAGAACTTTGCATTCGTCTCTACTAAGAACACACATAGCTCGAGCTCACCCCTCTACAATAGATGATGATGTAAAGCGACCCCATAAATGTTCGACTTGCGGCAAAAGTTTTATTGTTAAGATCAACTTGAATCTTCACATCAGAGTGTGTCATCCGGATCTGGCGGAACCAGAGGAGGAGGATGATGATGTAATGACAGATAACTCTTAG
Protein Sequence: METKSGVGITDHWMKIMMEPAGSDKQINNLQNDNRSSVKSEKMAEAYNGQDNNITYELKQAEVRYRCDVCDLAFNGMELLMLHKKFHGNDKDMPPMEPEPPVVKEGPKKRRKFKCDQCDVKVNSQYHLDIHKSKHEGNASKKYLCQVCDRSFVAAQFLKSHMQSHSATSTINCEICNKNFTGQAYLKLHMQLHNDIKKFKCSKCDEMFPTKNCLKIHMKKHTKVKNFKCDFCQKLFVSKITMEKHRQTHEGQPADCHVKCPQCDRTLHSSLLRTHIARAHPSTIDDDVKRPHKCSTCGKSFIVKINLNLHIRVCHPDLAEPEEEDDDVMTDNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779714;
90% Identity: iTF_00779714;
80% Identity: -