Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000053.1:1842859-1847021[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.06 6.6 8.4 1.4 2 23 37 58 36 58 0.95

2 14 0.00073 0.081 14.4 1.0 1 23 96 119 96 119 0.97

3 14 0.0018 0.2 13.2 1.4 1 23 121 143 121 143 0.97

4 14 0.00099 0.11 14.0 0.4 1 23 178 200 178 200 0.98

5 14 1.4 1.6e+02 4.1 0.1 3 19 230 246 229 248 0.93

6 14 0.11 12 7.6 1.6 1 22 258 279 258 280 0.82

7 14 0.012 1.4 10.6 0.5 1 21 286 306 286 307 0.93

8 14 0.39 44 5.8 4.3 1 23 319 342 319 342 0.95

9 14 2.6e-05 0.0029 18.9 0.1 3 23 349 371 347 371 0.90

10 14 1.5 1.7e+02 4.0 2.1 3 23 378 398 378 398 0.97

11 14 0.0021 0.24 13.0 0.3 1 20 403 422 403 425 0.94

12 14 0.00025 0.028 15.9 1.3 3 23 433 453 431 453 0.96

13 14 8.6e-06 0.00095 20.5 1.0 1 23 459 481 459 481 0.97

14 14 8e-06 0.00089 20.6 0.3 1 23 487 510 487 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.06	6.6	8.4	1.4	2	23	37	58	36	58	0.95
2	14	0.00073	0.081	14.4	1.0	1	23	96	119	96	119	0.97
3	14	0.0018	0.2	13.2	1.4	1	23	121	143	121	143	0.97
4	14	0.00099	0.11	14.0	0.4	1	23	178	200	178	200	0.98
5	14	1.4	1.6e+02	4.1	0.1	3	19	230	246	229	248	0.93
6	14	0.11	12	7.6	1.6	1	22	258	279	258	280	0.82
7	14	0.012	1.4	10.6	0.5	1	21	286	306	286	307	0.93
8	14	0.39	44	5.8	4.3	1	23	319	342	319	342	0.95
9	14	2.6e-05	0.0029	18.9	0.1	3	23	349	371	347	371	0.90
10	14	1.5	1.7e+02	4.0	2.1	3	23	378	398	378	398	0.97
11	14	0.0021	0.24	13.0	0.3	1	20	403	422	403	425	0.94
12	14	0.00025	0.028	15.9	1.3	3	23	433	453	431	453	0.96
13	14	8.6e-06	0.00095	20.5	1.0	1	23	459	481	459	481	0.97
14	14	8e-06	0.00089	20.6	0.3	1	23	487	510	487	510	0.98

Sequence Information

Coding Sequence: ATGGCTTCGCACACCCATATAGACCAGGAGAGACCACACTCAGCTACACAACCCCCCCAATTGGGTCCTAAACCTAAACAATCTACAATTGATTTAGTCGGTGGCATATACTGTcatatatgtcatattatatatgctaATAAAAGAGAGTATGATATACATTATGTTAAACATGAAACTGGAagcaaaaacataatatacactTGTGTAGTGTGCCATAGAGGGATAACGGGGTACCCCAGTTTCCGTGGCCACTGTTACACAAGTCATGTTATCAAAGAGAGATTCAGgtGCGAACATTGTTCTAAATTATTCTCAAAGCCCTTAGCTCTAAGAGAACATGTCAATGTTATGCATAGATTCAAATGCGCTTCCTGCAGTAAAGAatttaatactaaaaaggaGTTCAAATTGCATGAAATCATTCACAATGACACAGATATGCCACCGTTTAAGTGTCAAGCATGTAACAAGCAAATTGATACATTAGAGGGCTGCAAGGAACATGTTGACACACATTCAGTTTCCATATACTTTTGTCCCATATGCAATGAAAACATTTCAAGCAGAAGCAATGCTACagaccatttaaaaaaacattttggagATATTAACGATGAAAGTTctgatatacaaattaattttgaaaaagatgaaaattatataaaacaattaggtggaattttatgtaaattctgCCCTTTAGTGTACAAGGATAGGGTTGAATATGATGCTCATTTTTCATGTGAACATGGAAATGAAGACATAGTGTACACATGCAATGTTTGCGGCAAGGAGTACCAGAAGTATTCTGTGTTCAGTGATCACTCTTACAATCATGTTATGAAAGACAGATTCtgCTGTGACATATGCCTGAAAACATTCAATCGCCTGTCCATCCTAGTTACCCACATGGAGGTATGCCAGGCCAGTTCCGATGCCAATGGTAAACCATTCGCCTGCTTCCACTGCAAGCACAAGTATGGAACAGAAAAGAGGCTAAGAGAACACTTGAGAGATGCACACGGAGTGCACTGTGTCAGTTGTATGGAAGAGGGctgcaataaaatATTTTCGACACCAAAAGATCTAATCAATCATCAGCGAGTCCACCGGTCCCAGCAAAACTGGTGTAGACAGTGCGGCCTCCTGTTCACTTCCCGTAAAGCCTGTGAACGACATCTAGACGTACACAAGAAGAGATTGTATGTATGTCCCGTCTGCAATAGAAACTATAGTGACAAATACCTCATATTGAAACATTTACCTCAACATTTTGAAACTGTCCTCCATCTTTGCAAAATATGCGGAAAAGCTTATAATGCGAAAAACAGGTTGATCGAGCACATGAAGACACATGCTGAGACTAAAACACATAATTGTTCATACTGCGGCAAGGGGTTCGTTAAGCTTGGTCAATTACAACAGCATCTGAACGTTCATACTGGATCTAAACCTTATAAATGTCCTATATGCGAAAAATCTTTTGCAAGTTATCCGAACTGGGGTAAACATTTACGTAGAATGCACGAAACCGATggcaaaaagtataaaaaaccaGAGAATGTTCCGGAAATCAATGAATCTGATGAAGAAGAAAGTGACAACTTTGTTAAGGAAATTGAATcaaaagttaataaaacaaatgatttgAACGCTCATTTGCAAGTGGATATATCGCAAATACCTGGTGCAAAAAtagatagttttattttaaatgaaccaGACAACAGTACCATGGAGTCGGACAGTATAGATCCAACAATAATTGCAAAGGAgttagaaatatttgaaaactcAAATGTAACTGGTGGCAAGAGTGTAGTTGAGTTTGTTAATGTCATGCCTACAAGTAGTGTGATTTTTGGTGATACAACAGAACAAAATCCACAATCGTCTATGTCCAACTACAGCTATCCAGCGGAGTACGGACCGGAGTTCAACACATTCCCCTGCGACGGCAACGGCTTCCTCGACCTCGATGACCACATGCTGCCACATATCGATCCTCTACTGACCATAAAAAACCAATATAATGAAGTATACAATCAAAATTACCCAACCGGCCTCGAACCTGCTACCTACGACACACAAAAATGGGAACCGATCATAACTAAAGTATATCCAGAGTATTCTTACACGTACGGCGACATGGTCGAGACCAATCGACTGTCTATTATGAATACAGACATATTTTGA
Protein Sequence: MASHTHIDQERPHSATQPPQLGPKPKQSTIDLVGGIYCHICHIIYANKREYDIHYVKHETGSKNIIYTCVVCHRGITGYPSFRGHCYTSHVIKERFRCEHCSKLFSKPLALREHVNVMHRFKCASCSKEFNTKKEFKLHEIIHNDTDMPPFKCQACNKQIDTLEGCKEHVDTHSVSIYFCPICNENISSRSNATDHLKKHFGDINDESSDIQINFEKDENYIKQLGGILCKFCPLVYKDRVEYDAHFSCEHGNEDIVYTCNVCGKEYQKYSVFSDHSYNHVMKDRFCCDICLKTFNRLSILVTHMEVCQASSDANGKPFACFHCKHKYGTEKRLREHLRDAHGVHCVSCMEEGCNKIFSTPKDLINHQRVHRSQQNWCRQCGLLFTSRKACERHLDVHKKRLYVCPVCNRNYSDKYLILKHLPQHFETVLHLCKICGKAYNAKNRLIEHMKTHAETKTHNCSYCGKGFVKLGQLQQHLNVHTGSKPYKCPICEKSFASYPNWGKHLRRMHETDGKKYKKPENVPEINESDEEESDNFVKEIESKVNKTNDLNAHLQVDISQIPGAKIDSFILNEPDNSTMESDSIDPTIIAKELEIFENSNVTGGKSVVEFVNVMPTSSVIFGDTTEQNPQSSMSNYSYPAEYGPEFNTFPCDGNGFLDLDDHMLPHIDPLLTIKNQYNEVYNQNYPTGLEPATYDTQKWEPIITKVYPEYSYTYGDMVETNRLSIMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00457450;
90% Identity: -
80% Identity: -