Basic Information

Insect: Dione vanillae
Gene Symbol: ZIPIC
Assembly: GCA_037178615.1
Location: JAZFAU010000331.1:31074-40431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.7e-05 0.0085 17.5 2.8 1 23 219 241 219 241 0.99

2 12 0.0035 0.39 12.3 0.5 2 23 249 271 248 271 0.91

3 12 0.8 89 4.8 2.5 1 23 275 297 275 297 0.94

4 12 0.0046 0.51 11.9 1.6 1 23 302 325 302 325 0.96

5 12 0.00086 0.096 14.2 0.1 3 23 331 352 329 352 0.96

6 12 0.04 4.4 8.9 0.1 3 20 362 379 360 381 0.93

7 12 0.0011 0.12 13.9 0.0 3 23 394 415 393 415 0.96

8 12 0.0048 0.53 11.8 4.5 3 23 423 444 422 444 0.96

9 12 0.00013 0.014 16.8 0.7 2 23 464 485 464 485 0.97

10 12 1.4e-05 0.0015 19.9 1.5 1 23 491 513 491 513 0.99

11 12 1.1e-05 0.0013 20.1 3.2 1 23 519 541 519 541 0.94

12 12 3.8e-06 0.00042 21.6 1.8 1 23 547 570 547 570 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.7e-05	0.0085	17.5	2.8	1	23	219	241	219	241	0.99
2	12	0.0035	0.39	12.3	0.5	2	23	249	271	248	271	0.91
3	12	0.8	89	4.8	2.5	1	23	275	297	275	297	0.94
4	12	0.0046	0.51	11.9	1.6	1	23	302	325	302	325	0.96
5	12	0.00086	0.096	14.2	0.1	3	23	331	352	329	352	0.96
6	12	0.04	4.4	8.9	0.1	3	20	362	379	360	381	0.93
7	12	0.0011	0.12	13.9	0.0	3	23	394	415	393	415	0.96
8	12	0.0048	0.53	11.8	4.5	3	23	423	444	422	444	0.96
9	12	0.00013	0.014	16.8	0.7	2	23	464	485	464	485	0.97
10	12	1.4e-05	0.0015	19.9	1.5	1	23	491	513	491	513	0.99
11	12	1.1e-05	0.0013	20.1	3.2	1	23	519	541	519	541	0.94
12	12	3.8e-06	0.00042	21.6	1.8	1	23	547	570	547	570	0.98

Sequence Information

Coding Sequence: ATGAACGATCAACTCTTTTGTCGTGTTTGCTTTGCATCGGACAATGTGAAGCTCTGCAGTATATATTCTTTTGGATTGACTGAAGCATATGAAAAATTTGTTGATATAAagaACAATGAGCGAGTTGCTCTATcagaatatatatgtagctaTTGTACTACATTGCTGTTCAAAAGTTTAGCTTTCCGAGAGAAATGCCTGGCTGCTTACAATGTTATGAAGTATGCGACACAAACTAATaTACCATTACACCAATTAAATGAAACATCAAACTTCAAACTCCCATAcacaatatcaaataaaaatccaACGATAAACCTACAATATACAGAGGAAACAGCAATAAAACAAGAATTTGTGccaataatagaaattaaaatagagaACTCGGAAccgaagaagaagaaaagaaagaagaagaaggaacCAATTCAATTGAAAACAGAGGATGTGTTCAGTTGTGATGAAACATGTGATAATGATTCATTTAATGATAATGATTTACAGAGCAATGATTTACAGAGTAATGATGTGATTAATGAATCCGCTGTACATGAATTATTGGAGGatgtgaaaattataattttgagtaAACAAGAGCAAGTCCAAGAAATAGAAGATAGGAAGGCCTCGTCTAATTATTTGAATTCTTCATACAAATGTAGTTATTGCTTCAAAGGGTTCATGATGCCGTCCACTTTTAGGAATCACATGTTGAAGCATGATccgGAACGGGGGGCTTTAGTATGTGATATATGCAAGTCGAGATTCTCCGAACCCCGATCTCTCAGAGCCCACATAGTGCATACGCacgaaagaaaatatatatgtaaattgtgtGACCACGTGTCGAGGAGTAGTCATCGGGCAAAAGAACACGCAAAATGGCACAAAGGGTTTACGTTTACGTGTAAAATATGTGGGGCTACGTTTGCTAAATCAACAAGCCACCTAACTCACATACGTCTACAACATCCGTCAGGGATCGCATGCGATATATGCGGAGAGTCGTTTATAGGAGAGTTTGGGTTGAAAATGCACAAGAGGAAAGCTCATAATTGCGATCCAACCCAACTAACTATATGCGAACAGTGTAACTTTAAATTTGCAAGTGTCGAAGCTTTGTCGAAACATCTGGAATATTCCAAGGATGAAGTATGCGATGCGGACATGAGgccGTGTACACAATGTGGGGAGAGTCTCGTGTCTGAAGAAGCCCTAAATGAGCATATGAAGAACGGTCATAAGGAAGAAGAAGCGGCTTTTTGTCACGATTGTAAACGGACTTTCACGTCAACACGCTCGTACCAGATTCACTTCCAGCGAGTGCATCTCGGCGTGAAGCTGAAACAAAGGAAGCGTGCAACGTGCAAGCGCGGTGAGAGCGCCGTGTGCGAGGTCTGCGGGTACAAGTGTATCTCTAATGCAACTTTGATATACCACCAAAGGACCCATACCGGGGAAAAACCGTACCAATGTACAGAGTGTCCGAAAAAGTTTAGCGTCTTCCAGCGACTGCAGATTCATCTAAGAACCCACACAGGGGAAACCCCGTACCAATGTCAACATTGTCCTAAAGCTTTTAAGCATAAGGCGGCTTTGAACAGGCATGATCGAgtACACACAGGAGCCAAGCCCTACAGCTGCCAGCATTGCGGCAAAGCGTTTTCACAATCCAACTCGATGAAGTTACACGTGAATACTGTACATTTAAAGCTACCCGCGCCTTATAGAAATAGACGaccgaaaataaattaa
Protein Sequence: MNDQLFCRVCFASDNVKLCSIYSFGLTEAYEKFVDIKNNERVALSEYICSYCTTLLFKSLAFREKCLAAYNVMKYATQTNIPLHQLNETSNFKLPYTISNKNPTINLQYTEETAIKQEFVPIIEIKIENSEPKKKKRKKKKEPIQLKTEDVFSCDETCDNDSFNDNDLQSNDLQSNDVINESAVHELLEDVKIIILSKQEQVQEIEDRKASSNYLNSSYKCSYCFKGFMMPSTFRNHMLKHDPERGALVCDICKSRFSEPRSLRAHIVHTHERKYICKLCDHVSRSSHRAKEHAKWHKGFTFTCKICGATFAKSTSHLTHIRLQHPSGIACDICGESFIGEFGLKMHKRKAHNCDPTQLTICEQCNFKFASVEALSKHLEYSKDEVCDADMRPCTQCGESLVSEEALNEHMKNGHKEEEAAFCHDCKRTFTSTRSYQIHFQRVHLGVKLKQRKRATCKRGESAVCEVCGYKCISNATLIYHQRTHTGEKPYQCTECPKKFSVFQRLQIHLRTHTGETPYQCQHCPKAFKHKAALNRHDRVHTGAKPYSCQHCGKAFSQSNSMKLHVNTVHLKLPAPYRNRRPKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779701;
90% Identity: -
80% Identity: -