Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000321.1:409186-412814[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00029 0.032 15.7 3.7 1 23 149 172 149 172 0.98

2 13 0.16 18 7.1 8.1 1 23 176 198 176 198 0.98

3 13 0.00079 0.087 14.3 6.3 1 23 204 226 204 226 0.99

4 13 0.00013 0.014 16.8 2.0 1 23 232 254 232 254 0.97

5 13 0.00049 0.055 15.0 0.2 2 23 262 284 261 284 0.91

6 13 7.7e-07 8.5e-05 23.8 1.4 1 23 290 312 290 312 0.99

7 13 0.00033 0.036 15.5 0.9 1 23 318 340 318 340 0.99

8 13 8.3e-05 0.0092 17.4 4.5 1 23 351 373 351 373 0.99

9 13 2.5e-06 0.00027 22.2 3.1 1 23 379 401 379 401 0.97

10 13 0.0012 0.14 13.7 1.8 1 19 407 425 407 430 0.92

11 13 4.7 5.2e+02 2.4 1.6 1 23 440 459 440 459 0.81

12 13 0.0018 0.2 13.2 4.5 1 23 464 487 464 487 0.97

13 13 1.6e-06 0.00017 22.8 0.5 1 23 492 515 492 515 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00029	0.032	15.7	3.7	1	23	149	172	149	172	0.98
2	13	0.16	18	7.1	8.1	1	23	176	198	176	198	0.98
3	13	0.00079	0.087	14.3	6.3	1	23	204	226	204	226	0.99
4	13	0.00013	0.014	16.8	2.0	1	23	232	254	232	254	0.97
5	13	0.00049	0.055	15.0	0.2	2	23	262	284	261	284	0.91
6	13	7.7e-07	8.5e-05	23.8	1.4	1	23	290	312	290	312	0.99
7	13	0.00033	0.036	15.5	0.9	1	23	318	340	318	340	0.99
8	13	8.3e-05	0.0092	17.4	4.5	1	23	351	373	351	373	0.99
9	13	2.5e-06	0.00027	22.2	3.1	1	23	379	401	379	401	0.97
10	13	0.0012	0.14	13.7	1.8	1	19	407	425	407	430	0.92
11	13	4.7	5.2e+02	2.4	1.6	1	23	440	459	440	459	0.81
12	13	0.0018	0.2	13.2	4.5	1	23	464	487	464	487	0.97
13	13	1.6e-06	0.00017	22.8	0.5	1	23	492	515	492	515	0.97

Sequence Information

Coding Sequence: atgttgAAGAATACCTTgggtttatatcTACAATCTCCAGGATTAGATATAAGTAATACTATATGTGATATGTGTATCATGCAGCTTCGAAAAGCAAGTCAATTTAAAAACCAAGTAATATTATGTGAAGAGAAATTTAGGGAATATTGTAATAatGAATTATTACAACAAGTGgaagtaaaaattgaaaaagatgcggATATTGAAGTTGTTGTGAAACAAGAGATTGTTAAAGCGGaagaatatCCGATTATTGATGACTGtgaatatagtaatatagaagAGAAAGATATAGAAAGTAAAGAATCGGTGGAACATGTGTACAACACTATTATAGAGAGTCAAGAGCCAAAAATTcttgttaaatATAAACCAAAAAGAAAAGTaccattaaaaagaaaattgaaatggtgCAACAGATTAAAAACGGAAAACGGATACAAATATTCGTGTAAAAAGTGTTCAGCTACTTTTGACGTATACGGTCATTTATTTCGCCATATGAATAGAAAACACATAAATCAGTTCCATTGTAAGATTTGCAAAGAAACTTTCATAGAACACAAGAAATACAGCaatcattataaaaaacatacggagaaaaagttatataaatgtcaatattGTGACAAGTGTTACAAAAATCTACCCTCTTTCTACTATCACACCAATACGCACATACAAAAGAACAAATTCATCTGCGACATATGCAATAAAGTGTTCTTGCATAGGACTTCGTTGCAAAAACATATACTGTATCATATGGGGTTGAGTAAGAAAGTCGTGTGCGACGTGTGTGGCCACCCTTTCAACGATATaaccaatttaaataaacacaaatccGCTGTTCACGACAAAATAAGGCCTTATAAATGCACCTTGTGCCCGAAAACGTTTGCGTCACCGAAAAACTTGTTGTACCACACGAGAAGGCACACAGATGACAGACCGTTTAAATGCGATTTGTGCGAGAAAGCCTTCATAACTATATCTATTttgaataaacataaaaaaacacacGATGCAAAACAAAATGGCGGCCCTAAACTTTACAAATGCAAAATATGCACGAAAACGTTCGACCACAAGGGTCTTTATTTGTCGCACGTCAAAAAACACGATGTAATTAGACCTTTTAATTGCAATTTATGTGGTAAAGGGTTCTGTACACAATATACGTTGAACCGCCATCTTGAAAGCCACGAAAGGATAAAAAAATTCCCTTGTAATCAATGCGATGCGTCGCTTTCAACTAAATCTTTATTGAAACGCCATTGTGACAGAGTTCACGATCCGAATCGACCAATCAAGAAGCGTTTCACGTGTGACGTATGCAAGATGGCGGTCACGGATTtggaaaaacacaaaaaaagtcACACCAATAAGCGATTTCGATGCGAATTTTGCTCCAGATCGTATTCTGAGAGGAATACCTTGCATCGCCATATAAAACAAAGCCATAGTGGTGTTAAATTCCCGTGCAATTTGTGCGGTAAAGTCTATGTACAGAAAGGTAGTTTGAAAAATCACGTGAAAAGAACACACAAAGATGTTAAAACTGATGAAGAATga
Protein Sequence: MLKNTLGLYLQSPGLDISNTICDMCIMQLRKASQFKNQVILCEEKFREYCNNELLQQVEVKIEKDADIEVVVKQEIVKAEEYPIIDDCEYSNIEEKDIESKESVEHVYNTIIESQEPKILVKYKPKRKVPLKRKLKWCNRLKTENGYKYSCKKCSATFDVYGHLFRHMNRKHINQFHCKICKETFIEHKKYSNHYKKHTEKKLYKCQYCDKCYKNLPSFYYHTNTHIQKNKFICDICNKVFLHRTSLQKHILYHMGLSKKVVCDVCGHPFNDITNLNKHKSAVHDKIRPYKCTLCPKTFASPKNLLYHTRRHTDDRPFKCDLCEKAFITISILNKHKKTHDAKQNGGPKLYKCKICTKTFDHKGLYLSHVKKHDVIRPFNCNLCGKGFCTQYTLNRHLESHERIKKFPCNQCDASLSTKSLLKRHCDRVHDPNRPIKKRFTCDVCKMAVTDLEKHKKSHTNKRFRCEFCSRSYSERNTLHRHIKQSHSGVKFPCNLCGKVYVQKGSLKNHVKRTHKDVKTDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -