Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000038.1:1170693-1176324[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00087 0.097 14.2 0.7 2 21 244 263 243 264 0.94

2 12 0.064 7.1 8.3 2.0 1 23 276 298 276 298 0.92

3 12 6.1e-05 0.0068 17.8 2.9 2 23 305 326 304 326 0.97

4 12 9.6e-06 0.0011 20.3 0.7 1 23 332 354 332 354 0.98

5 12 2.4e-05 0.0027 19.1 1.8 1 23 363 385 363 385 0.97

6 12 2.6e-05 0.0029 19.0 1.3 2 23 392 413 391 413 0.96

7 12 0.0022 0.25 12.9 6.5 1 23 419 441 419 441 0.98

8 12 3.3e-09 3.7e-07 31.2 0.8 1 23 447 469 447 469 0.98

9 12 0.00077 0.086 14.3 4.2 1 23 475 497 475 497 0.99

10 12 0.0012 0.14 13.7 0.5 1 23 503 524 503 524 0.92

11 12 0.0051 0.56 11.8 0.2 1 23 530 552 530 552 0.96

12 12 0.00016 0.017 16.5 0.8 1 23 558 580 558 580 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00087	0.097	14.2	0.7	2	21	244	263	243	264	0.94
2	12	0.064	7.1	8.3	2.0	1	23	276	298	276	298	0.92
3	12	6.1e-05	0.0068	17.8	2.9	2	23	305	326	304	326	0.97
4	12	9.6e-06	0.0011	20.3	0.7	1	23	332	354	332	354	0.98
5	12	2.4e-05	0.0027	19.1	1.8	1	23	363	385	363	385	0.97
6	12	2.6e-05	0.0029	19.0	1.3	2	23	392	413	391	413	0.96
7	12	0.0022	0.25	12.9	6.5	1	23	419	441	419	441	0.98
8	12	3.3e-09	3.7e-07	31.2	0.8	1	23	447	469	447	469	0.98
9	12	0.00077	0.086	14.3	4.2	1	23	475	497	475	497	0.99
10	12	0.0012	0.14	13.7	0.5	1	23	503	524	503	524	0.92
11	12	0.0051	0.56	11.8	0.2	1	23	530	552	530	552	0.96
12	12	0.00016	0.017	16.5	0.8	1	23	558	580	558	580	0.99

Sequence Information

Coding Sequence: atggcaAACGAGGGAAACGGAAAGAGTAATTCGTCTATTGATTTAGAAAGTGAGATACCTTTTACTGCAATTGTTGATATTAATCAAGCTAAAATATTGCTAGACAATACAGATAATGTCCAAAATAAACCCGCCGTAGATTTTgatgttaaattaatttgtcgGATTTGTTTGTCGaccaaaaataatatgatttcatTTATGTCTAGAAGTAGACATTGTGTAGTGGCAGATATGTTTGAAGCTGTTACATGTATTAAAGTTCATCCAGAGGACAATCTTCCATTACAAATATGTGTAACATGTcacaacaatataattaattgctatgaatttaaaacaaaatgctgCAAGAGTGATAATATTctcagaaaaatattaaattcaaattgcagATGTTTTGACAAGAAAGAAATAGGAATACAAACAATAATTACAGATAAGGAAAGtcaagacaaaatatttaatataaataaagaagaaaacaattctgttaataaaaaagataacttCAATGATGACCCTAATCAGAAAGTAGATAGAATTGATGATCAAGAAGAAATTGAATACTtagaggatgaattattttttgtcaCCTATATTGATAATGAACCTACACAAGATAACAATAAAAGAAGACCAATATCAACACAAAACACAACACAGAAGGaagATTTAGAACTTCTCAAACCaagaataatacaaaataacaaagtaaaaagATATCTCACATGCGAACTGTGTTCtaagaaatttattaaatcgaAGACTCTAAGAGCCCACTTAAAGCAATGTCGTAGTGATAACAGTTCAAATAAGAAACCATACAGTTGTGGACATTGTAAAGAATCATTCATCTGTGAAAGTGACCTTCAAATACATTCTGCTTTACATAATAAGAGCAACAAGTGGACTTGTAATAAATGTGACAAAGAGTTTACAGAGCGCAACAGGTTCCGCCGCCACATCCGGCGGCACATGGAGTGGAAGCGTTACGCTTGCGAGAGCTGCGGCAAGACGTTTGCGGAGCAGTGTGCGCTGCGGCGCCACGTGCGCGTGCACACCGGCGAGGAGCGCGAGAAGAAGTACTGCTGCCAGCTGTGCGACAAGAGGTTCAGCGACAGCAACCAGCTGGCGGCGCACACGGCGCGGCACACGGGCGCGCGGCCCTGCGTCTGCGACGTGTGCGACAAGCGCTTCCCGTCGCGGCGCCTGCTCGCCTCGCACCGCCGCGTGCACTCCGACCTCAAGCAGTACGCCTGCGTCTACTGCGACCGACGATTCCGCCACGAGTCGACGCGAAATACCCATCATAGAACACACACAGGGGAAAAACCATATATTTGCTCTGTATGTGGCAAAACTTTTATACAGAACTCCAACTTGAAGCTGCACATGAGAACCCATACAGGAGAAAAGCCGTATAAGTGTGACATTTGTGAACGCAAATTCACGTCAGGCTCGTCGCTGACGTGCCATCGCCGCACACACACTGGCGAAAAGCCTTACAGCTGTCCTGTATGTGGGAAGAGGTTTGCGCGCACAGACATCCGCACGCACCTGCGGCAGCACAGCGGCGAGCGCCCCTTCCCCTGCTGCGCCTGCCCCAAGGCCTTCATTAACGCTGCCCGCCTGCGCGACCACTACCTTATACACACCGGGGAGAAACCTTATGAATGTGCTATTTGCtcagataaatttaaaaggaaaaacgACTTGGCTAAACATGTCAAAACTCACGacaaaattcaaaaatcaaaatgtacAATCAAAAATAAAGAACTTTTAATCGTGCAACAAGTACCATTGGTAGTGGACGATAGTATTATGTTCGCAGATAATGATACAAGTAATGTTATATCGGATGCGACAAGAGGAGCAAGTTTCAGTTCTGAAGGTGAAAACAAAGATATTCTAGTAACCGAGGAAATCCCTTTGGAAGTATCTGGAGAGTTAATTTTACAAGAAGATAGTAATATTAAGACTGAACTCGTTGTTCTAGACAATGTGCAAAATACCATAAATTTCGAAGCAAATGAATCTTTAAGTGGCAATGAAACTGATAATGTAAAATTAGTGACAGCAAAGGAAAACGGTGAAAACGTATCTTCATCTTCGGTATTAGAAAGTACAACTATGAAATTGTATCAGTTAGATCAAAGTTTGGTACAAATCCACACATCTGGAGGTCAACTTACTATTAGAAAAATTACTAGTAAAATGACTGCAAATTTTTAA
Protein Sequence: MANEGNGKSNSSIDLESEIPFTAIVDINQAKILLDNTDNVQNKPAVDFDVKLICRICLSTKNNMISFMSRSRHCVVADMFEAVTCIKVHPEDNLPLQICVTCHNNIINCYEFKTKCCKSDNILRKILNSNCRCFDKKEIGIQTIITDKESQDKIFNINKEENNSVNKKDNFNDDPNQKVDRIDDQEEIEYLEDELFFVTYIDNEPTQDNNKRRPISTQNTTQKEDLELLKPRIIQNNKVKRYLTCELCSKKFIKSKTLRAHLKQCRSDNSSNKKPYSCGHCKESFICESDLQIHSALHNKSNKWTCNKCDKEFTERNRFRRHIRRHMEWKRYACESCGKTFAEQCALRRHVRVHTGEEREKKYCCQLCDKRFSDSNQLAAHTARHTGARPCVCDVCDKRFPSRRLLASHRRVHSDLKQYACVYCDRRFRHESTRNTHHRTHTGEKPYICSVCGKTFIQNSNLKLHMRTHTGEKPYKCDICERKFTSGSSLTCHRRTHTGEKPYSCPVCGKRFARTDIRTHLRQHSGERPFPCCACPKAFINAARLRDHYLIHTGEKPYECAICSDKFKRKNDLAKHVKTHDKIQKSKCTIKNKELLIVQQVPLVVDDSIMFADNDTSNVISDATRGASFSSEGENKDILVTEEIPLEVSGELILQEDSNIKTELVVLDNVQNTINFEANESLSGNETDNVKLVTAKENGENVSSSSVLESTTMKLYQLDQSLVQIHTSGGQLTIRKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -