Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000080.1:987293-991025[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0044 0.49 12.0 1.7 1 23 201 223 201 223 0.96

2 13 0.072 8 8.1 0.5 1 23 229 252 229 252 0.97

3 13 0.0041 0.45 12.1 1.3 1 21 264 284 264 285 0.95

4 13 0.0079 0.87 11.2 3.4 1 23 303 325 303 325 0.98

5 13 5.9e-06 0.00065 21.0 1.5 2 23 335 356 334 356 0.95

6 13 1.3e-06 0.00014 23.1 3.2 1 23 362 384 362 384 0.99

7 13 5.7e-06 0.00063 21.1 3.9 1 23 390 412 390 412 0.99

8 13 6.4e-08 7.1e-06 27.2 1.7 1 23 418 440 418 440 0.96

9 13 0.00033 0.037 15.5 0.5 1 23 446 468 446 468 0.97

10 13 0.00043 0.047 15.2 0.2 1 23 474 496 474 496 0.95

11 13 0.0012 0.13 13.7 6.6 1 23 502 524 502 524 0.97

12 13 1.2e-07 1.3e-05 26.3 1.4 1 23 530 552 530 552 0.99

13 13 0.0013 0.15 13.6 0.5 1 20 558 577 558 580 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0044	0.49	12.0	1.7	1	23	201	223	201	223	0.96
2	13	0.072	8	8.1	0.5	1	23	229	252	229	252	0.97
3	13	0.0041	0.45	12.1	1.3	1	21	264	284	264	285	0.95
4	13	0.0079	0.87	11.2	3.4	1	23	303	325	303	325	0.98
5	13	5.9e-06	0.00065	21.0	1.5	2	23	335	356	334	356	0.95
6	13	1.3e-06	0.00014	23.1	3.2	1	23	362	384	362	384	0.99
7	13	5.7e-06	0.00063	21.1	3.9	1	23	390	412	390	412	0.99
8	13	6.4e-08	7.1e-06	27.2	1.7	1	23	418	440	418	440	0.96
9	13	0.00033	0.037	15.5	0.5	1	23	446	468	446	468	0.97
10	13	0.00043	0.047	15.2	0.2	1	23	474	496	474	496	0.95
11	13	0.0012	0.13	13.7	6.6	1	23	502	524	502	524	0.97
12	13	1.2e-07	1.3e-05	26.3	1.4	1	23	530	552	530	552	0.99
13	13	0.0013	0.15	13.6	0.5	1	20	558	577	558	580	0.93

Sequence Information

Coding Sequence: ATGGTAGACTTATCGAGAACTTGTCGGACATGTATGAGGATTGGAGAATCGCTACGAGATTTGTTTAGTACTTTTCAAATTGATAATAACACTACACTAAAGCTCGCCGACATTGTCATGCAAGCTACTTCACTGCAGATTAAAGAAAAAGACAATCTTCCTCAACAACTTTGTAATGTATGTGAAGAAAAATTAAGATTGATGTATACATTTAGGAAGCAAGCTTTAGAATCagattatgaattaaaaaaacttattttatccTGTTCATCTATTAAAGATGAGGACAGTGACAATGACTTCAAACATGAAAATTACAATGAATTTGCAAATTATTATgatgaaattttattacttaacaatGACTTGTCACATGAGAATAGTCAAACCAGTAGACGTGAGAAACATCTCATCAGTGACagtgaaaaatatttcactaataCAAGTGAAGCTAGAACTAACTGCcttatgaaaattaattctaaattatatttgaataaacaATTTGATATAAACACTTTAGCAAGTAAAGACAAGACCTTAGGTAATGAATTAGAAGATTTAGATTCTCCtgtaaaaacagaaaatattagtAGTACATATGACTGTGTATTTTGCAAAAAGACATTTGAGAGTCATGAATTTTTACTTGTACATTTGATGGAGCACAATAAAAACAAACCATTCAAATGTGATGAATGTAACCAGGAGTATCTAGTAGAGACATCATTAGCTGCCCATAAAAGGAAATATCATCCCTCGGtagaatataatttttccaAAGGCCAGTACAAGTGTGTTTACTGTGTGTTGACTTTTTTTAATGAAGAAGAACTTATGAAGCATATTTGTAAGCCCAAATCTGATATGAGTGAAAGTGTGAAAGGTGACACTACTACTAAGAGGTTTAAATGTAAACTGTGTAATCAGCAGTATGAAAAAAAACGTTCACTCTTATCTCATTTTAAAGTGCACACAAGAGAAACAAAGACAAAAAAGTGTATATGTGACTATTGCCAAAAGGAGTTCACTCAGAAAGGTGCTCTGAAAAGACATATTGAATTACATACAAAAGACAAACGTTATAAATGCACAGAATGTCCAAAGACATATTCGCGGTATGATCAGTTTACAAGTCACCTGCGGAAACACAGCGGAGTCAAGCCTTATGTTTGCGAACATTGCGACAAAGGGTTCACGCAGCTGTGCTCGCTGAAGGACCACGTGCGCACGCACACGGGCGAGGCGCCGTACCTGTGCGCGGAGTGCGGCAAGAAGTTCAAGAACAACTCCAACCTGCGCCAGCACCTCCGGCGCCACAGCGGGCTCAAGCCCTTCGCGTGCGCGCTCTGTCCGCAGACCTTCTGTGCTAAAGgTCAGATGAAGGCGCACATGGAGACGCACTCGGGCGTGCACCCGTTCGTGTGCGTGCAGTGCGGCGCGGCCTTCACCAAGGCCAACTCGCTCAAGAAGCACTCGCTGCTGCACCTCGGGGTCAAGCCCTTCGCCTGCGACACCTGCGAGATGAGCTTCACGTGCAAGGACCACCTGAAGCGGCACCAGCGCAAGCACACCGGCGAGAAGCCCTACCGCTGCACGCGCTGCCCGCGCGCCTTCACGCAGAGCAACGACCTGCGCAAGCACATGCGCGTGCACGACGGACAGAACATATACCCGTGTAGCGTTTGTGGTACCAAATTCCGTCTGATGCGCGAGCTGAGGCGGCACTACCCGTCGCACTACACGGTGGGCGCGGGGGCGGAGGCCGGGAGCGGCTcgggggcgggggcggaggccgggggcggcggcggccgGCGCGCGGGCCGAGGGGCAGATTACCATCACGTTCAACAGAGGCGCGGCGGGCGGCGACGCGGACATCACGATTAA
Protein Sequence: MVDLSRTCRTCMRIGESLRDLFSTFQIDNNTTLKLADIVMQATSLQIKEKDNLPQQLCNVCEEKLRLMYTFRKQALESDYELKKLILSCSSIKDEDSDNDFKHENYNEFANYYDEILLLNNDLSHENSQTSRREKHLISDSEKYFTNTSEARTNCLMKINSKLYLNKQFDINTLASKDKTLGNELEDLDSPVKTENISSTYDCVFCKKTFESHEFLLVHLMEHNKNKPFKCDECNQEYLVETSLAAHKRKYHPSVEYNFSKGQYKCVYCVLTFFNEEELMKHICKPKSDMSESVKGDTTTKRFKCKLCNQQYEKKRSLLSHFKVHTRETKTKKCICDYCQKEFTQKGALKRHIELHTKDKRYKCTECPKTYSRYDQFTSHLRKHSGVKPYVCEHCDKGFTQLCSLKDHVRTHTGEAPYLCAECGKKFKNNSNLRQHLRRHSGLKPFACALCPQTFCAKGQMKAHMETHSGVHPFVCVQCGAAFTKANSLKKHSLLHLGVKPFACDTCEMSFTCKDHLKRHQRKHTGEKPYRCTRCPRAFTQSNDLRKHMRVHDGQNIYPCSVCGTKFRLMRELRRHYPSHYTVGAGAEAGSGSGAGAEAGGGGGRRAGRGADYHHVQQRRGGRRRGHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00775440;
90% Identity: -
80% Identity: -