Dvan014894.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- bab2
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000188.1:921997-953633[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-07 0.00014 22.5 0.0 2 37 475 510 474 511 0.95
Sequence Information
- Coding Sequence
- ATGCAGGGGCTCGTGAGCGACAAGACGTTCCACTTGAAGTGGAACAACCACCTGCAGAACCTCAGCCAGCTGTTCACGACCATCTACTCGTCGTCGGCGCTGGCGGACGTCACGCTCTCCTGCCGCGATGGCACCCTCAAGGCGCACAAGCTCGTCCTCTCGGCATGCAGCCCCTACTTCGAGCAAATATTCAAGGACAATCCGTGCCAGCATCCTATTGTGATACTGAAAGGCATACCCTTTTCCGAGATAAATTTATTGGTGGAATTTATGTACAAAGGCTCAGTTGATGTACAAGAACTAGATCTGCAGTCCCTTATGCACACAGCTTCTGAGTTAGAGATACGAGGGTTAGCATATGAGGCTAGAGACAATGCCGCACAGCTTTTGAATGTTAACTTAGAGTACCCCTCATATGGACAGAATGCCACAACTGCAGCTCCTGCTACTTCCACTTCAGTTTCCACATCCCAGTCATACTCTCAAGCACGGACAGATGTAGAAAGGTTGAAACAGATACACATGTACCAACAGTCCATGATGCGAGCTGAGGAGATACGTCGAAGGCGTCGTGAGGATATGCCCACAACACAGACAGctgtaaataatattctagCGGCCGCTGCCAGAGAAATGGAGGAGGCGAGGCACGCGGCCAGAGGTGGAGAACGAGTAGTTGCCAGTATACAGACTGAGCAAGAAGcagcagcagcagctgCTGCAGCGGCAGCAGCGGCAGCTTCGGAAGTTAAACGTGAACTAGAAGAAGAAAGGCCTAAGAAAAGGATGTCTATAATGTCACCAGAAGATGACAAACTGAGAGTCAAAAAGAAAGCCATGACCGTACGCTTCCAAGAGGACAATAAGACTGATGAGGGCCCCGCCAAAGTCACTTCACCGGGTGCCACAAACTCAAACAACGGCAATGACAAAGACGATATGAAACCCGGCGGTATTAAAGTCGTGCAACTCGCTGTACTACAGAAACCCACAAACAACGAGCATGACGATTCAGACGagAAAACAACCAAACAAGGAATGGATGATGATGAAGAGACAGACTCCAGCGGTTCAATATCAGATTCAGGCGCAAACGAATCTCAAGATGGACGTCCTCACGTATGCGATATATGTGATGTCAGGTTCGCCCGCTCGTCGCACCTCTCCCGCCACCGCCTCACGCACACCGGCGAGAGGCCGTTCACGTGCGGCGGCTGCGGGCGCTCGTTCGCGCGCTCCGACAAGCTGCGCGTGCACACGAAGATCTGCGAACGGGAGGACCCCACTGTTGACATGAACAGTGACGTCACAGTGAAGAGAGGAGAACAACTCCGAGGTGATGTCGGGTATGGTGCGGACCACCCACCGCGAgAATCAGAAGAAGTCACAGCTGAAAAACCCAGCGTTTTTAAAAAATGGTCAGACGAATCTATGATAAAAGCGGTAGATGATGTCACGAATAATAAACTTACTGTTACGGAGGCTAGTCGCGTACACAATGTTCCACTGAAAACTTTACGTAGACATATCGTTTGGTCTTCGAAAGGGGAGCCTATTGTAAGTCGAGCTTTAAGACTAAGACCCGAAAGCGAACGGAAAGTTATCGCTCATGTGAAACGCCTAAAATCTATAAGATATCCCCTAAACAATACTCGCGTAAAGTCCATTATCTATGATTTTATAGAGAAACTAAAATTACCCCACAAGTTTAATAAAGACAAGAAAGAAGTTGGCCGCGATTGGTTCAAGGGGTTTATGAAAAGACATCCCGACGTCAGTACTAGTAAAGAAGAAGATTTATCGCTCGCCAAAACTATGGGTATCAATCGGGATGAGATCAACAATTACTTTGAAACGTTAACAAAGTTGCTGACCGAGAATGAGTTTTTGGATAAACCAGATAGGATTTATAACATGATTGAAAATAGTATACCGGTTAAATGTAACATCGGTCGCGTTTTACCTAGGGCTAGCAAAAGTGAACATTTAAGTGCAGAGTGTGAGAATATATCTTTGATCGCGTGTTGCAACGCTCAGGGAATATTTCTACCTCCCGTTTTAATTATGAAGGGAAAAGATTCGCCAAAAACCTCCGAAGATCTACCCCCAGGCTCGGAAGTCTACATAAATCAAAAATCATCGTACATGAACGCCGAATTATTCTTCGAATGGATGAAGAATCATTTTATTCCGCGGAAACCAGACGGAAAAGTCCTTTTAATTTTGGATCCTTATTACTCTCTTTCGTACTCCTTTGAAGCTCTTGAAGTAGCTGAAGAGAGTGACGTCATCATACTTTGTCTTCCGAGCCACACTACGCAAACTCTAAATCCAATGGACAAAGCTTTTTGTAAGCCTTTCAACAGTGCCTTCGCCACAGAAATTACAAATTGGTATATTGATAATGAAGGAAGCTGTTTGAATCCTTACCATTTAAGCAAGTTATTAGCTAACACTTGGAGCAAGTTTGCTGTACCTGCAGCAAGCATATCAGGGTTCACGTCGACAGGAGTGTATCCACATGATCTTAAAATAGTTGCAGAATTGCTTAAACCACCCGAGCCTACTTCAAACCAAAATAGTACTACAATGTACAGAATAGTAGTGGTTTTAAACTCGACCCTCGACCCGGTACGGAATGAGATCTCGCCGGGGGACCTAATCGACCCGCCGCGGAGGGGGCGCGGCAGGCCACGCAAGACGCCATTACCGTTGACGCCCAAGATCAAGAAGCGGAGGGGACGCCCGCCTAAGACTTCATTGGACATGGAAGGATGCGTATTAACGGGTGGAGCTGTGCCAAGCGGTGCGTTGTCAGGACACCAGCTTCTATTGAAACGCAAACGTGGCCGTCCTCCGAAGAATTACTTCTTACCTTCTCAAGGcgGTATGGAAATGTCAATACCGATGCAGTACGGGCTAGCCGCGGAAATAAGCAAGTTTTACGGACGACCCAACGAAAACTACAACGCGACAAACCTTCCATTTGGCGATTTCTCATATTTGACGGAAATGATGTATAACCCTCTCGCATACTCCTATGGGGTCACCAGCGTAGATCCTGATAGAAACGTGGACCCTGACCAAACTGGCACCAGCGAGACTTCCCACGACCGGACTATTGACGTGTCAGACTCTTCCTCAGACGACGAAGATTCCAGAGTGGAGCCCGAAGAAAACGTACCGCCAGTCGGCATAGAAACACAAATAATGACTGTGGGAGATTGTCAAATAGTGAAATTGCCAGCAAACGAGGAAAAGGATGAGCAGCAGGAGACCGTGTCAGCCCCCAGTTCGGTCACAATCACGCCTATAACAACTGTAGGTGACTGCACCATCAGGCCCGTGGAAAACACATAA
- Protein Sequence
- MQGLVSDKTFHLKWNNHLQNLSQLFTTIYSSSALADVTLSCRDGTLKAHKLVLSACSPYFEQIFKDNPCQHPIVILKGIPFSEINLLVEFMYKGSVDVQELDLQSLMHTASELEIRGLAYEARDNAAQLLNVNLEYPSYGQNATTAAPATSTSVSTSQSYSQARTDVERLKQIHMYQQSMMRAEEIRRRRREDMPTTQTAVNNILAAAAREMEEARHAARGGERVVASIQTEQEAAAAAAAAAAAAASEVKRELEEERPKKRMSIMSPEDDKLRVKKKAMTVRFQEDNKTDEGPAKVTSPGATNSNNGNDKDDMKPGGIKVVQLAVLQKPTNNEHDDSDEKTTKQGMDDDEETDSSGSISDSGANESQDGRPHVCDICDVRFARSSHLSRHRLTHTGERPFTCGGCGRSFARSDKLRVHTKICEREDPTVDMNSDVTVKRGEQLRGDVGYGADHPPRESEEVTAEKPSVFKKWSDESMIKAVDDVTNNKLTVTEASRVHNVPLKTLRRHIVWSSKGEPIVSRALRLRPESERKVIAHVKRLKSIRYPLNNTRVKSIIYDFIEKLKLPHKFNKDKKEVGRDWFKGFMKRHPDVSTSKEEDLSLAKTMGINRDEINNYFETLTKLLTENEFLDKPDRIYNMIENSIPVKCNIGRVLPRASKSEHLSAECENISLIACCNAQGIFLPPVLIMKGKDSPKTSEDLPPGSEVYINQKSSYMNAELFFEWMKNHFIPRKPDGKVLLILDPYYSLSYSFEALEVAEESDVIILCLPSHTTQTLNPMDKAFCKPFNSAFATEITNWYIDNEGSCLNPYHLSKLLANTWSKFAVPAASISGFTSTGVYPHDLKIVAELLKPPEPTSNQNSTTMYRIVVVLNSTLDPVRNEISPGDLIDPPRRGRGRPRKTPLPLTPKIKKRRGRPPKTSLDMEGCVLTGGAVPSGALSGHQLLLKRKRGRPPKNYFLPSQGGMEMSIPMQYGLAAEISKFYGRPNENYNATNLPFGDFSYLTEMMYNPLAYSYGVTSVDPDRNVDPDQTGTSETSHDRTIDVSDSSSDDEDSRVEPEENVPPVGIETQIMTVGDCQIVKLPANEEKDEQQETVSAPSSVTITPITTVGDCTIRPVENT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00778442;
- 90% Identity
- iTF_00458188;
- 80% Identity
- iTF_00458188;