Dvan024294.2
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000337.1:10340-10876[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-07 0.00025 21.7 0.0 1 38 18 55 18 61 0.90 2 2 3.9 2.9e+03 -0.9 0.0 14 25 134 145 131 145 0.82
Sequence Information
- Coding Sequence
- ATGCCaagaaattacaaaagaaaagtAGGTAcgagaaattataaaaactatacagAAGAAACTTTGAGACAATGTTTAGCTTCAATAGAAAACCGTGAGTTAACCCAAAGAAAAGCCAGCGAACAACATGGCATTCCACGCAGGACTATCATCAACCACTTAAAACTTTTACGATCTAAAAAAACAGCTAGGCCACCAGGTGCTCCAACCACGTTTACTCCCGAAGAAGAAGCGTTATTCGTATCTTGTATTCAAAATTTAAGCGAATATGGTTTCCCGTTGGCGACCACCGATCTTcgtattgtaataaaatcataCTTGGACAAAATCGGTTGCAAAGTGAGCAACTTTAAAGATAATTATCCAGGAGTCGAATGGGTgtccaaatttttaaaaagaaatgatgGTTTATCACAACGATTTGCTGCGAATATAAAACGGAGTAGAGCTGCTGTTGATCAAAATACACTCACAGAGTACATCCAGAATTTGAGAGGTTGTCAAAGATATACCACCCAAAAATCTACGGAATTTTGA
- Protein Sequence
- MPRNYKRKVGTRNYKNYTEETLRQCLASIENRELTQRKASEQHGIPRRTIINHLKLLRSKKTARPPGAPTTFTPEEEALFVSCIQNLSEYGFPLATTDLRIVIKSYLDKIGCKVSNFKDNYPGVEWVSKFLKRNDGLSQRFAANIKRSRAAVDQNTLTEYIQNLRGCQRYTTQKSTEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334787;
- 90% Identity
- -
- 80% Identity
- -