Dvan019289.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000248.1:205527-206327[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-09 5.8e-06 26.9 0.0 2 44 9 52 8 53 0.90 2 2 1.7 1.2e+03 0.3 0.0 24 34 83 93 83 101 0.78
Sequence Information
- Coding Sequence
- ATGCCAAAAAGGAAGTCGTGGGGCCCTGAAGCAATGGAGAAAGCAGTTGAAGCTGTAAGAGCAAAAGGAATTGGTTACAAGAAGCCATCAAAGTGTTTTCAAGTCCCAAGAACTACTTTGATAGACTACACAAAAAAACAGAACAATCAGATGCAAAATTTACTTTCTGGAAAAATGGGAAGGAAACCAGTTTTATCGGTGGAATTAGAAGAAGAGCTGGTAAAGTATTGTTTAGAAATAGAGAAGAATTACTATGGCATTAGTGCATCAGACCTAAAACGAATGTCTTTTCAGTTAACAATTAGAAATAATATCCCacatccatcttctccaactaaAATGAAAGCAGGCAAGAAATGGATGAGGTTATTTATGGCTCGTTATCCTGCATTGTCATTTCGTAAACAAGATTACTTCAacccatataaaatattcaacgtCGACGAAACTGGAATCAGCACTGTACACCATAAAGTTCTAAAAATGTTGACTATAAAATGCAAAAGCGACGTTCATATGTTGTCATCTGTTGAAAGAGGAGCATTAGTTACTGTTGTTACTTGTATGTCAGCTGCTGGTCAGTTTATTCCTCCTTTGATGGTCTTTCCGAGGAAAAGTATAAAAGCTGAGATACTCGATGGAACACATCCAGGCACCATAGGTGGATGTCATCCATCTGGTTGGACCCAGCCTGAGCTATTTACAAAATGA
- Protein Sequence
- MPKRKSWGPEAMEKAVEAVRAKGIGYKKPSKCFQVPRTTLIDYTKKQNNQMQNLLSGKMGRKPVLSVELEEELVKYCLEIEKNYYGISASDLKRMSFQLTIRNNIPHPSSPTKMKAGKKWMRLFMARYPALSFRKQDYFNPYKIFNVDETGISTVHHKVLKMLTIKCKSDVHMLSSVERGALVTVVTCMSAAGQFIPPLMVFPRKSIKAEILDGTHPGTIGGCHPSGWTQPELFTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -