Dvan032736.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010001202.1:6252-8455[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-11 3.8e-08 33.9 0.0 4 35 38 70 35 80 0.87
Sequence Information
- Coding Sequence
- ATGCAGGATCACGCGACGCAGTTTGTCAGTGACGCCACTAGGCTCGCGGATAAAAGAAAGAACACCAAAAAGATGTCACAAGGAAAAACAAAAGGAAAATGGGATAAGGAAGGCTTGCGAACTGCAATCGATAAGGTTTTGTCCAAGAAAATGGGTTTGAGGGAAGCTGCATCGCGGTACAATGTACCAAAAAGTACTCTTCACGACAAAATAATGGTATTGAAACGTGGGGAGGAAGTGACATTACATGCAAAGCTCGGAAGATTCACCAAAACCTTTACACCGGAGTATGAACAAGTTTTAGTAGACCATATAGAAGATTTGTCAAATAGATGTATGCCGCTAATGAAAAAAGAATTTCTAAAGTTAGCTTTCGACTTGGCTGAAAGTATGAAGATCCCACATCGCTTTAATAAAGAAAAGCAGGCTGCTGGTACGCATTTTTATTACGATTTTCTGCAGAGACATTCGAACATTTCATTAAGAGTACCAGAGTCGACAAGCATAATGCGAGGCATAGGGTTTAATAAACCACAAGTAGATATCTTCTACAATAATCTTGAAAAGCTGATGACTCAACACAAATTCTCACCTTCCAATATCTACAATTGCGACGAGACTGGGATAAGCTGTGTGCATAAACATCAGAAAGTTCTTGCTCCTAAAGCGGTTCGCCAAGTCGGAAAGCTCACCTCGGCTGAGAGAGGCAAAAACATcacaattttgttttgtatgagTGCCAACGGCCACTTTTTAccaccatattttatttttccgagACAAAGGATGAATGATCGTCTAATGATCAATGCTCCCGCTGAAAGCGTTGGTGTGGCCCAGCCAAAAGGGTGGATGAATAGCGATTTATTCTTGAAGTGGTTGCAGTTCTTTGAAAAATACTCGCACCCCACAGAAGACCACCCAGTTCTGCTTCTTCTGGATGGACATTGCAGCCACAAAACCCTTGCggttataaatttttgtagaGAACATAACATTCACTTGATAAGCTCACCTCCACACACAACTCACAAACTTCAGCCCTTAGACAGGACGTTCATGAAACCATTCAAAGATGCCTACAACCACCAGTGCGATTTGTGGATGAGAGCTAACGCTGGATCTCGCATAACAGATTATGATAGTGCTGGACTGGTCAAGGAGGCATTTACAAAGGTAGCTCGGATGGATATTGCAGCATCAGGTTTTAAATGCACGGgaatttttccatttaataGGCATCTGTTTTCTGAATTAGATTATTTGGCTGCAGATATGACAAATATACCAATTGAAGTGGCAGATGCTTCTTCTGACCAACCAAGTTGCAGTGAAATTTCCGTGCCGTCCACCGATTTAGCTTTAGCTGGTAGTTCATCTACAGTTGACGCTCAGGAATTTTCTAAAGATGTAGAAGCAGAAAACCCAACACATCCTTCTAAACAACCTATTAAGGAAACTGTCGTCAGCAATAACCAACCTTCAACTAGTTCACAACCAGATATTGTTCAAATTGTTCATAAACTGTCACCTTTGCCAAATGCTGCTGTAAAAAGAGCTGCTGCTCGGAAGagaaaatgtgaaaaaaCAATCAAAGAAAAGGAAAAACGAACCAAAGGTCTGAAATCCAAAGGAAAGAGTGGTAGTAACCCCAAAGAAAGAGAACCATTGACTGAAATGCAAAACACAGAAAGTACAACTTGCGTAGTGTGTTTGGAAGACCACAATGAAGACTGGATACAATGCTCTAGCTGCCAAGGATGGGCTCATGAGGCATGTGCAGATATTCCCGAAAGTGGGGATGCTTATATTTGTGATAGATGCacaatgttttaa
- Protein Sequence
- MQDHATQFVSDATRLADKRKNTKKMSQGKTKGKWDKEGLRTAIDKVLSKKMGLREAASRYNVPKSTLHDKIMVLKRGEEVTLHAKLGRFTKTFTPEYEQVLVDHIEDLSNRCMPLMKKEFLKLAFDLAESMKIPHRFNKEKQAAGTHFYYDFLQRHSNISLRVPESTSIMRGIGFNKPQVDIFYNNLEKLMTQHKFSPSNIYNCDETGISCVHKHQKVLAPKAVRQVGKLTSAERGKNITILFCMSANGHFLPPYFIFPRQRMNDRLMINAPAESVGVAQPKGWMNSDLFLKWLQFFEKYSHPTEDHPVLLLLDGHCSHKTLAVINFCREHNIHLISSPPHTTHKLQPLDRTFMKPFKDAYNHQCDLWMRANAGSRITDYDSAGLVKEAFTKVARMDIAASGFKCTGIFPFNRHLFSELDYLAADMTNIPIEVADASSDQPSCSEISVPSTDLALAGSSSTVDAQEFSKDVEAENPTHPSKQPIKETVVSNNQPSTSSQPDIVQIVHKLSPLPNAAVKRAAARKRKCEKTIKEKEKRTKGLKSKGKSGSNPKEREPLTEMQNTESTTCVVCLEDHNEDWIQCSSCQGWAHEACADIPESGDAYICDRCTMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457958;
- 90% Identity
- iTF_00457956;
- 80% Identity
- -