Dvan011119.2
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- -
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000136.1:1365147-1373752[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-11 2.1e-08 34.7 0.0 4 39 101 137 98 141 0.89 2 4 3.5e-11 2.6e-08 34.5 0.2 2 39 153 190 152 193 0.92 3 4 6.6e-16 4.8e-13 49.6 0.1 2 45 208 252 207 252 0.96 4 4 9.7e-15 7e-12 45.9 0.1 4 39 262 298 260 304 0.91
Sequence Information
- Coding Sequence
- ATGGGCGTGGACATCGCGGTCGATGCCTCTAGTCCAGAGGAGAGTCCAGAGTCGTGCATAATGGATCCAAGGAGAGTTGGAATGCTGCCACTCCTTAAATGCAGTCTTTTTTTCACGAATCATCACTTCTACCTTGTTATTCCACCACCACGTCTCCCTGTCGATGACATGCCCACCCCTCGAAACGCCAAGAACACGTTTACCAGCCAACAACCCCACCTGAGTGGCGACGACACAGACTCTAACGGACCAACGCAAGAAACTTTTAGCCGCTCAAGTCCCAAAAGCTGGACGCAGCAAGACATGGAGAAAGCTTTGGAGGCGCTTAGAAAGCACAATATGAGTTTAACTAAGGCATCGGCAACCTACGGCATTCCTTCTACCACTTTGTGGCAAAGAGCGCACCGACTTGGAATAGACACTCCTAAAAAGGAAGGCGCTTCAAAGTCGTGGAGCGAGGCGGACTTAAAGGGAGCTCTGCACGCCCTGCGAGCTGGCGCCATATCTGCCAACAAGGCTAGCAAGGCCTACGGCATCCCGTCCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCCTTCAACGCCGCGCCCACGGCGTGGCGCCGCGCCGACCTGCAGCGCGCGCTGGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGGCCTCTACGGGATACCTACCGGCACGCTGTACGGGCGCTGCAAGCGCGAGGGCATCGAGCTGTCGCGCTGCAACCCCGCGCCCTGGCCCGAGCACGCCATGGAGGACGCGCTCGCGGCCGTGCGAATCGGCCAAATGTCTATAAACCAAGCGGCCATCCACTACAACCTGCCGTACTCGTCGCTGTATGGACGATTCAAGAGGTTTAAATTTCAATCTGCGCAGAATCAACCCCCGATCCCCGCGGAGCCCGAGCCCCGCGACCCCACGGACCCCGCCGACCCCGCCGACCCCGCCGACCCCTACGCGCAGTACGGGGCCGCCGCGCAGTGCCCGCAGTACCCGCACGCGTCCCACGACAGCTACGCGCAGTACGCGCAGTGCGCGCACGTGTACTACGCGCAGTGTGACGTCACCAGCTGA
- Protein Sequence
- MGVDIAVDASSPEESPESCIMDPRRVGMLPLLKCSLFFTNHHFYLVIPPPRLPVDDMPTPRNAKNTFTSQQPHLSGDDTDSNGPTQETFSRSSPKSWTQQDMEKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALAAIRAGAASVQRAAGLYGIPTGTLYGRCKREGIELSRCNPAPWPEHAMEDALAAVRIGQMSINQAAIHYNLPYSSLYGRFKRFKFQSAQNQPPIPAEPEPRDPTDPADPADPADPYAQYGAAAQCPQYPHASHDSYAQYAQCAHVYYAQCDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -