Dvan000165.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dione vanillae
Gene Symbol
JARID2
Assembly
GCA_037178615.1
Location
JAZFAU010000005.1:7395-28587[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-15 5.6e-12 46.9 0.0 9 88 644 719 638 720 0.86
2 2 3.6 1.3e+04 -2.4 0.1 2 21 727 749 726 759 0.73

Sequence Information

Coding Sequence
ATGGCGCAGAGAAAATTCGCACAAGGCGTATATGTCCCCCCACCTTCGGTTCAAATTCCTAATCGTAAAGTACTAACCGACCTTGCAAAAGACCAAACAAATATAATACGCAGGAAAACAACTGCGAAGACTTTATTAGACCTCGTATCTTTAGAAAgtgtCCATAAACACCAGCCAGTGGTGCTTTTGGAAAGACTGAAGAATGTTGATGCTGTTGAAAATTTAATGGCTCACCCTGATATCTTGCCTATAGATGAAGTAAAAACAAATCATACTGTACCTATGAAATCACGTGCACAAGTGCAAGTACCAGTTTCTGGAAGAAATCCATTATTAAAAAGATCCATGTACATAAGATCGGGAAGcaagaagaataaaaaaagaaatacggGTAGGCTTAAGGTAAAACAACGCCGTAATCCTATTCGGAAAGCTGCTTTTAAAGCGTCTTTGCTGTGGAAATATACTTCGCCAGTGGACACAGAGTTTTCTATAGATGATGACAAACCTCTGACGTTCTATACTAGAACTACCGATTTGAATGGTCCGTGGCGGAGTCCGATTATACTTGGATCCAAAAATAACGATTCAGGCCCACCATCCGCACCATTGAGTGTTGTTGAATGTTTACCTACTGATAGCCATGAAACGCAGCCGCCATCTTCAATTCCAAATAATTCTGCTGAAAATCAACCTATACAGAGTGATGTAAAGATATCTAAAGATGGATTAAATTTTCTGTTTATAGAATTACTGCCATCAACTTCTATTCCAAGTAATACTGAAAGTCAATCTACATTGAATGATGAACCACAGTCGTCATCTTCTATTCCAACTAATGCTGCTGAAAGTGTGTCTACACCTAATGATGACCCACAGCCGTCATCTTCTACTGAAGCTAATACTGCCGAACGTCATCCTAAACAAAATGACGatGATGAAGTCATGCCAACATCGAGCGTGAATGGCGAAGTGGGACAGTCTAATCCGGATTTTGaaTTACCAGAGCCTGGATCAAGCGGGGTTCAATACCGCACAAGCGTTGAACGTTCACATGATGATTTTGTTACTACAAATTTACCTATAGATTCAACCTGTATATCAGACCCTCAGACATCTATTTATgATCGAGCTGAACCAGGTCCCAGCGGAGTAACACGTGGAAAAGGCAAGGCTAAGGACAAGACTAAGGGTCTACCGCCATCTgATGCTCAATCAGGCGGCAGTCAGCAGCAGCTACAGACGCGTTCTAACGCTCATATTGAAAAAGACTTGACACAAGGTGGCAATAGAGCACCCTCTCCTACCAATTCCGATTCATCATTGGATGGCGACGTCCCGTTACCCACAGAGCAAGCATACATTAAAAACATGATGGTACAAACTTGGTTGGATTCGACAGTTTTTAAAGTTCCAGAAGTGCCAAAAGCTCGAACTCGCCAGAATTCTCCACATCCTAATATAGAGGAGCAAGACCAGGATCGCCCTCGCAGAGTGCACCGGTCCAGCAGGAGAAATTCCAATGGGTCTAATGTCAGTGACCGACCTCTCAGTCCTTTGTCTTTTGTGACAACTCTTGACGCCGAAACACAATCAACTATTATTGACGCTGACGCCATTGAAGTCACCGTACCTACAAGGCGTGATAGAATACAAACGCCCACTAGACGCAAGAGACCGAGGATGGAACGGGCTAAACTAGTAGATGCACCCGTTTTTCGTCCCACCGAGGAGGAATTTCAGGATCCGGTAGCGTTTTTCGAGAAAATAATGCCGACCGCAGCTAAATTTGGCCTATGCAAAGTAGTAGCGCCTCCTGGATTCAAACCCCATTGCAATATAAACGATGCTATGCGCTTCACCGTATTCAACCAGTACATCGCGCGTGTGTTCAAGCGCTGGGGCTCCGCCACTAGAGAGATATGCGCCATGAGATCTTATCTGGCTACACTCAAGATTGCTCTCGCACAGCCACCCTTGCTGGGTGGTATGGAAGTGAATTTGCCGAAACTATACCACGCCGTGAACAGTAATGGAGGCTtgaaaaatatgaacaaaaagaATTGGGCCAAAGTAGCAGATGAGCTCAACTGTGGTAAACTGTCTCATCCGGACAGAAGACTAGACCAGTTATATATGAAGTACGTAGTGCCGTACGGCTCGCTGAGCAAAAAGGAAAGACACGAAATGATGAAGAAGGTCGAAGAGCTCTGGCAAAAAAGGCACAGGAAGATGCTCGACAGGGCAGCGAACCCGCTACATCGTCAAAAGCACTTGTTGGGAGAATCCGACTCCTCTGATGATGACGATGATGAAGCGGATGAAAGGGAATATCCACATTTGATGAAGCAATTGAAGGAAGCAGAGGAATGTATCACAAAAGGCCGTCACATGGATCTCATTACTTTCCGAaggATTGCAAACAACGTACTAAAGAGACACTTCCCCACACGCACTTGTGTAGACAGTATAGAGAATGCGTACTGGAAGTACGCCTTGTTAGGTTCCGAACACGTGTGTGTGCACAGCGCCTCTATAGAGACTAGCAGCGAGGGGTACGGCTTCACTAACAACCAGTCGGATCCGTACGGCAAACATCCGTGGAATTTAAAGATGCTAAACCAAAACAACGGGAACATCCTCCGCCTACTTGGCTCAGTCGTTGGCCTAACGATTCCTACACTACACGTTGGGATGCTCTTCTCCACCAGCTGCTGGCACCGCGACCCTCACGGTCTACCTTGGATGGAGTACATGCACGAGGGACCACAGAAAATATGGTACGGAATACCGGACGAAGAAAGCGAGAGATTTAGAAAGGCAGTAGTCAAGCTTTGTCCCACGTCAAGTCAAAACAAATCTATTTGGCTGCCGTCTGACATCACGATGATACCACCGAACTTGTTGCTAGAACATTCCGTGTCAATGTCTAGAGCTCTCCAAAGCCCTGGagaatttattatagtatttccCAAAGCATATTCCTGTTCTATATGCACTGGGTACACTATATCAGAGAGTGTCTACTTCGCTACCAACTATTGGATTAACAACATCAGTCAAGTATTCCaaGAGCTCCGCGACAGCTGTGAGCCGTCCATGTTCTCGCTGGAGCACCTCCTGATCTCCGCGGCGAAGGACCCCCGCGCCACGCTCACTATGCTGCAGCTGGTGCACGCCAGCCTCTCCAACATTGTGGAGACCGAGCTGTCCCATCGCGAGGGGCTCGTTAGACATGGGCTTACGCCTCGCTACGAGAGAAAAGTGAACCCAACTGGCATTGTGTGGAACGTGTCCGACGAAGACGAGTGCGACATATGCCGCGCTAACTTATACTTGTCGAGAGTAAGTGTTGTATTGCTATTATACAGGGTTACAGGGTAA
Protein Sequence
MAQRKFAQGVYVPPPSVQIPNRKVLTDLAKDQTNIIRRKTTAKTLLDLVSLESVHKHQPVVLLERLKNVDAVENLMAHPDILPIDEVKTNHTVPMKSRAQVQVPVSGRNPLLKRSMYIRSGSKKNKKRNTGRLKVKQRRNPIRKAAFKASLLWKYTSPVDTEFSIDDDKPLTFYTRTTDLNGPWRSPIILGSKNNDSGPPSAPLSVVECLPTDSHETQPPSSIPNNSAENQPIQSDVKISKDGLNFLFIELLPSTSIPSNTESQSTLNDEPQSSSSIPTNAAESVSTPNDDPQPSSSTEANTAERHPKQNDDDEVMPTSSVNGEVGQSNPDFELPEPGSSGVQYRTSVERSHDDFVTTNLPIDSTCISDPQTSIYDRAEPGPSGVTRGKGKAKDKTKGLPPSDAQSGGSQQQLQTRSNAHIEKDLTQGGNRAPSPTNSDSSLDGDVPLPTEQAYIKNMMVQTWLDSTVFKVPEVPKARTRQNSPHPNIEEQDQDRPRRVHRSSRRNSNGSNVSDRPLSPLSFVTTLDAETQSTIIDADAIEVTVPTRRDRIQTPTRRKRPRMERAKLVDAPVFRPTEEEFQDPVAFFEKIMPTAAKFGLCKVVAPPGFKPHCNINDAMRFTVFNQYIARVFKRWGSATREICAMRSYLATLKIALAQPPLLGGMEVNLPKLYHAVNSNGGLKNMNKKNWAKVADELNCGKLSHPDRRLDQLYMKYVVPYGSLSKKERHEMMKKVEELWQKRHRKMLDRAANPLHRQKHLLGESDSSDDDDDEADEREYPHLMKQLKEAEECITKGRHMDLITFRRIANNVLKRHFPTRTCVDSIENAYWKYALLGSEHVCVHSASIETSSEGYGFTNNQSDPYGKHPWNLKMLNQNNGNILRLLGSVVGLTIPTLHVGMLFSTSCWHRDPHGLPWMEYMHEGPQKIWYGIPDEESERFRKAVVKLCPTSSQNKSIWLPSDITMIPPNLLLEHSVSMSRALQSPGEFIIVFPKAYSCSICTGYTISESVYFATNYWINNISQVFQELRDSCEPSMFSLEHLLISAAKDPRATLTMLQLVHASLSNIVETELSHREGLVRHGLTPRYERKVNPTGIVWNVSDEDECDICRANLYLSRVSVVLLLYRVTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-