Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000107.1:671582-681962[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.019 1.7 9.9 0.6 1 23 329 351 329 351 0.98

2 11 0.00047 0.042 14.9 7.2 1 23 358 380 358 381 0.95

3 11 0.058 5.2 8.4 1.8 1 23 385 407 385 407 0.97

4 11 0.052 4.7 8.5 1.8 1 23 412 435 412 435 0.97

5 11 0.0058 0.53 11.5 0.4 1 23 439 462 439 462 0.94

6 11 0.0086 0.77 11.0 0.5 3 21 476 494 475 499 0.93

7 11 1.2 1.1e+02 4.2 0.4 2 23 550 572 549 572 0.94

8 11 0.0077 0.69 11.1 1.1 2 20 588 606 587 609 0.89

9 11 0.00053 0.048 14.8 0.2 1 23 615 637 615 637 0.97

10 11 0.00026 0.023 15.8 5.3 1 23 643 665 643 665 0.97

11 11 0.00013 0.011 16.7 4.1 1 23 671 694 671 694 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.019	1.7	9.9	0.6	1	23	329	351	329	351	0.98
2	11	0.00047	0.042	14.9	7.2	1	23	358	380	358	381	0.95
3	11	0.058	5.2	8.4	1.8	1	23	385	407	385	407	0.97
4	11	0.052	4.7	8.5	1.8	1	23	412	435	412	435	0.97
5	11	0.0058	0.53	11.5	0.4	1	23	439	462	439	462	0.94
6	11	0.0086	0.77	11.0	0.5	3	21	476	494	475	499	0.93
7	11	1.2	1.1e+02	4.2	0.4	2	23	550	572	549	572	0.94
8	11	0.0077	0.69	11.1	1.1	2	20	588	606	587	609	0.89
9	11	0.00053	0.048	14.8	0.2	1	23	615	637	615	637	0.97
10	11	0.00026	0.023	15.8	5.3	1	23	643	665	643	665	0.97
11	11	0.00013	0.011	16.7	4.1	1	23	671	694	671	694	0.93

Sequence Information

Coding Sequence: ATGCGTTGCTGCATTCCTTCTTGCAAGAATGATTCCAGAAACATTACTAAGTCAGAGGGCATTACTTTTCATGTATTCCCAACCGAACCCCAAGCGAGGGCAGCTTGGTTGAAGGCCATCAGCAAGACCGAATGGTCACCGAAAGACAGGAGTGTTATATGCTCTGACCATTTTTTATGTGAagatttgtatgaaactagAAATGGTTTACGCAAAGTCAAGATTGGTGCAGTTCCTATTACTGTacagGTGTGCCGCATTTGTTTAAGTGTTGATAAAAAATTGCActcaatgaaaaaatataatttagaacaGGCCTATGAATGTCTTACAGGGATCTCGCCATCCAATGACAAGCTGCCACAAAACCTATGTACAGAATGCACTcaaagattattaaattgttataaatttagagCTAAGAGTCTTAAAGCTTATTCTTTAATGCTAGAACTGATTGGGAGAGGGGATATTTTAACAAAAGGCAACTTAATATGCATCAACCGGGAACAGAACTTACTAACTTCGCCATTaagtcaaaaaatattcaatccaGATCACTGTGACTTGTATATTGAGTATACGGAaccagatttaaatataaacaaatatgacGAGACGCCActagatgaaataaaaattgaaaaaaacgaTGAAGTCGATGACATTTTCAcggaaattaatgaaaatgatcattttaatgtgaatttaaatgaaaatgacaatgaaaatgaattcTCTATGAAAGATTATTCAAGCGATGATAGTATCCCATTGGAGAAACAAAGAAAGAGAAAGAAAGAGAAGGTGAAGAAGGTGAAGAAGATAAAGAAGATTGTTGAACCGAAAATAGATAGGCGTCGTAAaccatttttaaatgaagatttaaatgaaacattatTCACAGTGACCGATCTCTCCTTCGAGGAGCAAGTGGCGGAGATAGAGAAACGGAGAGAGAGCTCCAACTATAAGAATTCAGTTTTTAAATGTACGGAATGTTTTAAAGGGTTTTTGGATGAAGACGCTTACAATGGACATATGACAAGGCATACTGATCAATGCGGCGAATACGTATGCAGCATATGCAAAACGCATTTCAAGCACCCGCATGCGCTCCGCAAGCACATCACGGCGCATCACACGCAGCGGTTCAGCTGCAACCAGTGTCCGTATGTTACCACGCATAGacaAACAGCCAGGCTGCATGAGAGGTGGCACAAAGGAACTAAATACCAATGTCCTCACTGTCAAGACGAGTTTGTTAAATTCACCACATACATGGGTCACATACGTATCAAGCATCCGTCGGACTTCGTCTGCTCGCTGTGTGGATACAGCTTCGTGAGCGAAAAGGGCATTGAGCTGCACAAGAAGCTGAAACACAGGCTGGACGACGGATCGATACCAGAAGACGGGCCGCTGTGTGAGCTGTGCAATGTACGGTTCGTGTCGCAGGACGCGTACAGACGACACTTGCACGTCTCTGCCAGGCATAATAGCTGCGACTCTGATTCAAAAGATCCAAACAAAACAAGAAGAGGTAGAAGAACGAAGGAGAAGGAAGAGGAGAGTAAAACGGAGAGCTTAGACGATGGCGACAAGAGGAGGCTGCCCAGCCAAGTGAGGAAGGCGGAGGGTCCTATACCGTGTGAACAGTGCGGCCTCCAATTAGAAGATTCTAGAGCTTACCACGGCCACTTTAGACGGATGCATCCCGACAAGAATCGAACCAAGTACCCCTCGATGAAGTCACCGTGCATGTGCGAAGTCTGCGGGAGGATGTTTCAGAGCTACGCGCTGCTGAAGGACCACCGCTGGACGCACACGGGCGAGCGCCCCTTCGCGTGCGAGGCGTGCGGCAAGGCCTTCCGCATGCGCCAGCGCCTCGTGGCGCACCGCCGCGTGCACGCCGCGCGCCGCCTCTACGCCTGCCACCTCTGCGCCAAGACCTTCTCCACGCACAGCAACCGCCAGCGGCACATGTTCATCCACACGGGCCTCAAGCCGTTCAAGTGCGAGATGTGCGGGAAGTGCTTCAAGCACGCGAGCGAAAAGCGCGCTCACGTCACGTACGTGCACCTCAAGAAGCCCTGGCCGAAGCGAGCTCGGGCGAAGCGACGGGACAGCACCGCCAGGACGGAGCCAATGGAAGAAGTAAGCGGCGAAGTCAACATGGCACCCATTTGGCCTCAACATGAACTCAAGCCCACGTACTGTCAGCTCAGAGCTTAA
Protein Sequence: MRCCIPSCKNDSRNITKSEGITFHVFPTEPQARAAWLKAISKTEWSPKDRSVICSDHFLCEDLYETRNGLRKVKIGAVPITVQVCRICLSVDKKLHSMKKYNLEQAYECLTGISPSNDKLPQNLCTECTQRLLNCYKFRAKSLKAYSLMLELIGRGDILTKGNLICINREQNLLTSPLSQKIFNPDHCDLYIEYTEPDLNINKYDETPLDEIKIEKNDEVDDIFTEINENDHFNVNLNENDNENEFSMKDYSSDDSIPLEKQRKRKKEKVKKVKKIKKIVEPKIDRRRKPFLNEDLNETLFTVTDLSFEEQVAEIEKRRESSNYKNSVFKCTECFKGFLDEDAYNGHMTRHTDQCGEYVCSICKTHFKHPHALRKHITAHHTQRFSCNQCPYVTTHRQTARLHERWHKGTKYQCPHCQDEFVKFTTYMGHIRIKHPSDFVCSLCGYSFVSEKGIELHKKLKHRLDDGSIPEDGPLCELCNVRFVSQDAYRRHLHVSARHNSCDSDSKDPNKTRRGRRTKEKEEESKTESLDDGDKRRLPSQVRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTKYPSMKSPCMCEVCGRMFQSYALLKDHRWTHTGERPFACEACGKAFRMRQRLVAHRRVHAARRLYACHLCAKTFSTHSNRQRHMFIHTGLKPFKCEMCGKCFKHASEKRAHVTYVHLKKPWPKRARAKRRDSTARTEPMEEVSGEVNMAPIWPQHELKPTYCQLRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00458383;
90% Identity: iTF_00458383;
80% Identity: iTF_00457295;