Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000108.1:930759-941289[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.6e-06 0.00042 21.3 0.7 2 23 439 461 438 461 0.96

2 7 6.8e-05 0.0061 17.6 0.2 3 23 469 489 468 489 0.97

3 7 0.007 0.63 11.2 0.2 2 22 498 518 497 522 0.91

4 7 1.5e-06 0.00013 22.8 0.4 1 23 530 553 530 553 0.93

5 7 0.29 26 6.2 5.4 1 23 559 582 559 582 0.96

6 7 7.3e-05 0.0066 17.5 0.2 3 23 590 611 589 611 0.95

7 7 0.042 3.8 8.8 0.2 1 23 617 640 617 641 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.6e-06	0.00042	21.3	0.7	2	23	439	461	438	461	0.96
2	7	6.8e-05	0.0061	17.6	0.2	3	23	469	489	468	489	0.97
3	7	0.007	0.63	11.2	0.2	2	22	498	518	497	522	0.91
4	7	1.5e-06	0.00013	22.8	0.4	1	23	530	553	530	553	0.93
5	7	0.29	26	6.2	5.4	1	23	559	582	559	582	0.96
6	7	7.3e-05	0.0066	17.5	0.2	3	23	590	611	589	611	0.95
7	7	0.042	3.8	8.8	0.2	1	23	617	640	617	641	0.95

Sequence Information

Coding Sequence: atgggAAAGCTTTGTTCAGTAAAGAGCTGTCCAAGCGGGcgcaaattgaaaaataaaaagaattataaaccTCAACATCTGTCATTCTTTCGGCCAACGACTCCGGCTAAATTGGAAAAATGGAATACAGCTTTGGGCACCAAAATGAAAACAACAGATTATATATGCCATTTACATTTCAAGGAGGATGACATCAAAATGTATGAATCGTTCAACATTAAAGGCGAGATCATGGTTTTACCTACAGGCAAGAAGTTGCTCCGAGACGATGCCTTGCCTACGGTGGAGCATCAGTTTAAACCTGTATCGAAATTAACTCATGAACTCAAAACATGGGTTATAAATAAACCGCTAAAGTCGAATTCTAATCACAATAAATCTGAAGAAAAAGTGGTGgaacttgaaataaataatactgaagaagaagatgtagaaccagaactacTGTCTCGGTTAGAAGAGAAATTTTTGGAGAATCTAAAGTCTTCGCTGCTGCCGCCAGGTTGGACGTATTTCGAGAAGCCCGAAGGGCTGGAGTTCTTGCGAATGGATGCAACTATGAAAGTTCTGAATCGTATACGAGTAAATAAAGACTTGTCTGTTACTGTAATATTTCCAAGTGAGGATGAATTGACAGTAGATGACAACATATGCTCCTACAGGAGCATCAACGAGTATCTGATGACAGTTCAGAAGTGGCCGATATGCGTCGGGACCCAGATGGAGAAGCGGAAgtatTCCCAAAATTGTAGAGGTGTGGTCGTTGGTGACGAATCTTACAAGAGGAACCAGATGAATACGAGATGCAAGTCCTGCAGAGTCTTGAGACACCGGCTGCTGAGTCGCCGCTCCAGGTCCAGTGCCTGCACCCAGAATACAATTACTCGAAATAGCAAGAGCCAATGCTTAAAAGAAATGggATCCCCCGAATCGGATTCGGATCCGCGACCGTCGCTGCTGCAGATAAAGTCGATACACAACTACTGCTGTCCGGAGACGGTGGAGGTAGAAGTTAAAGGCGAGTTACACGCTACATGTGAGTCGGAgacttttaatgtattaaaagttGAGGAACTGGAGAATGTGGAGAAGTCAACGGAAATGAAACGGAAACCCACAAAGGAGTCCACAGATGGAACTGACTTGGAGGAGAATGTCACCCTCGATACGgaaatattgtatgaataCGATCAGCTTGAAGACGCCTTTATAAGTGACGTGGAATCTGAGGAGGACGTAGAAGAGAAACGTataaagGCACCGATGAAACAGAAACGGAAACGAGAACCGACAGAGCTTCCGCCGGAGAGACTGCAGTGTGTGGAATGCGGGAAGGTGTTCAAGACGAAGAAGACGTACAGAGACCACTTGAAAGTCGTGCACGAGGGCCAGAACCGCCGTCCGTGTCCTCGCTGCGGGAAGGTGTACCGCTGGAGGTCTTCCCTGGAGAGGCATCTGCGAGGGCATAAGGCGCGCGACGCCGGCGAGCTGTACTGCGCGGCGTGCGACAAGGCGTTCGCGTCCGTCGACACCTACCGCAAGCACCTGCGCGTGTCCAGGAGTCACGTCGACGAGACCGACTTCAATTTCATGTGCAACGAGTGCGGCAAGAAGTTCGTGAACAAGACCCAGCTCCGCGACCACATCGACTGGGAGCAtctcaataatattaagtttagaTGTCAGCTGTGCGATAAGCCCTACAAGTGCCACACGACCCTGTACATGCACATGCAGAATGTGCACATCAACGAGGAGAAGAACCTTTGCGACGTTTGCGGGAAGTCTTACCAGAACCCAGACAGACTGAAGCGTCATATAATGGCGATGCACTCTCGCGAGAAGCCCTACAACTGCGCTATTTGTGGCGCCGAATTCGGCTGGTACTCCTCGCTGTACCGGCACGTGCGGGAGGTGCACCACAAGATAAAATTCCGGCGTAAAAGACAACCAAAGACAAAGAAGGTTAAGAAGCTGAAGGCTGAATGA
Protein Sequence: MGKLCSVKSCPSGRKLKNKKNYKPQHLSFFRPTTPAKLEKWNTALGTKMKTTDYICHLHFKEDDIKMYESFNIKGEIMVLPTGKKLLRDDALPTVEHQFKPVSKLTHELKTWVINKPLKSNSNHNKSEEKVVELEINNTEEEDVEPELLSRLEEKFLENLKSSLLPPGWTYFEKPEGLEFLRMDATMKVLNRIRVNKDLSVTVIFPSEDELTVDDNICSYRSINEYLMTVQKWPICVGTQMEKRKYSQNCRGVVVGDESYKRNQMNTRCKSCRVLRHRLLSRRSRSSACTQNTITRNSKSQCLKEMGSPESDSDPRPSLLQIKSIHNYCCPETVEVEVKGELHATCESETFNVLKVEELENVEKSTEMKRKPTKESTDGTDLEENVTLDTEILYEYDQLEDAFISDVESEEDVEEKRIKAPMKQKRKREPTELPPERLQCVECGKVFKTKKTYRDHLKVVHEGQNRRPCPRCGKVYRWRSSLERHLRGHKARDAGELYCAACDKAFASVDTYRKHLRVSRSHVDETDFNFMCNECGKKFVNKTQLRDHIDWEHLNNIKFRCQLCDKPYKCHTTLYMHMQNVHINEEKNLCDVCGKSYQNPDRLKRHIMAMHSREKPYNCAICGAEFGWYSSLYRHVREVHHKIKFRRKRQPKTKKVKKLKAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00457301;
90% Identity: iTF_00457301;
80% Identity: iTF_00457301;