Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000014.1:8512489-8518777[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.021 1.9 9.7 0.8 1 23 150 172 150 172 0.97

2 12 0.00042 0.038 15.1 2.0 3 23 180 200 178 200 0.95

3 12 0.37 33 5.8 2.0 2 23 208 230 207 230 0.94

4 12 0.24 21 6.4 1.8 2 20 239 257 238 261 0.90

5 12 8.5 7.7e+02 1.5 4.2 1 23 266 288 266 288 0.95

6 12 0.00015 0.014 16.5 3.3 1 23 318 341 318 341 0.98

7 12 0.31 28 6.1 2.0 1 23 374 397 374 397 0.91

8 12 0.017 1.6 10.0 0.6 2 20 403 421 402 423 0.91

9 12 1.4e-05 0.0013 19.7 2.5 2 23 428 449 427 449 0.96

10 12 0.00071 0.064 14.4 0.3 1 23 455 477 455 477 0.98

11 12 7.3e-06 0.00066 20.6 0.3 1 23 483 505 483 505 0.96

12 12 1.2e-07 1.1e-05 26.2 0.4 1 23 511 533 511 533 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.021	1.9	9.7	0.8	1	23	150	172	150	172	0.97
2	12	0.00042	0.038	15.1	2.0	3	23	180	200	178	200	0.95
3	12	0.37	33	5.8	2.0	2	23	208	230	207	230	0.94
4	12	0.24	21	6.4	1.8	2	20	239	257	238	261	0.90
5	12	8.5	7.7e+02	1.5	4.2	1	23	266	288	266	288	0.95
6	12	0.00015	0.014	16.5	3.3	1	23	318	341	318	341	0.98
7	12	0.31	28	6.1	2.0	1	23	374	397	374	397	0.91
8	12	0.017	1.6	10.0	0.6	2	20	403	421	402	423	0.91
9	12	1.4e-05	0.0013	19.7	2.5	2	23	428	449	427	449	0.96
10	12	0.00071	0.064	14.4	0.3	1	23	455	477	455	477	0.98
11	12	7.3e-06	0.00066	20.6	0.3	1	23	483	505	483	505	0.96
12	12	1.2e-07	1.1e-05	26.2	0.4	1	23	511	533	511	533	0.99

Sequence Information

Coding Sequence: atgaaaaaatgtagAGCTTGTCTTAAGATAGAAGATAATACTGTAAAAATGTGTCAATTTGATCAAAAAATGATTGGATATTTTAATCTACTTACTAATTTAGATgtTAAGCTCAATGATATTATGCCACAACAAATTTGTGAAAGCTGTGCTGGTATGGTGACTTTGTTTATAGAATTTAGGGATAAATGTATAAGTGCTAACTCTTTTCTATTAgacataaatattagtaagaatattaaagtGGAAGAAAGAATAAACTgtgataatattgatattaagatAGAACATATTAAGCAAGAAGTTGATAAATATGAAGAATACCTTCTCTCAGGTCATAATGttgatgataatattatatatgaactgAGTTTGAACGATGAAAAATGTGAAGaagTTCACAGTAATAAATTGCAAAGGGTAAATGATAATCTCTCAACACCCATTTACTCTTGTGgtCTTTGTATTAAAGAATGTAATGACAAAAGTTTGTTGCTAATACATTTGAAAGAACATGAAAGTGATAATGAGAGCATTTGTGATTTGTGTAAGCAGAAATTTAGTGACTGGCATCAACTATTTTCTCACAGACTCGAACacttgacaaataaaaaagagaaaGAGTGTCATCTATGTTCTTCTAAATTTACTTCACCACCATATCttgaatttcattataaaaaagtgcACTCTTTGATTaatAATCCAATACTAAAGTGCTTACcttgtaatgaaaattttactagTCCACAAAAATTTCAAAGGCATATTTGGAATTgtcatttagaaaataaatatatttgtgattgTTGTTCATGGAGATGTAATGATGAGAACAGATTTAAAAATCACATAGCTAAACATAAACGACATAACATAGTGGAAGATGGTAAAAGTATACCCTGcgataaaaataatgctacCTATAATACAAATTCTACAaACTCGATGTTTCAATGTCAGTCGTGTAGTAAGTGTTACCCTACATCTATTACACTAAGAAAACATATTCAAAGAGAACATTttgaaaaacaatatgtttGCGATTACTGTTTTAAAGAatatGGTTGTAAGAACGAGTTAAAATGCCATATAGAGAGACATATGGGTCATAAGATTTATGCGTGTGACGAATGCGAATATACTTCTAAGTTTAGTACGAATTTAAagTTTCACAAAATAAGGAAACACACGCCCAAAAGAGTGTATTGCACAGTATGTTCCAGAGTATTTACTGACCAACTGACGCTCGACGCTCACAAGTGTCAGCTTAAATCGTTAGTTTGCTCCACGTGCGGGAAAACGTTTAAAGCACATAAACAGCTGAGCCGGCACATGCTGAGCCACGAGGCGGCGGGGCGCTACGCGTGCGAGCGCTGCCCGGCGCGCTACCGCTCGCGGTCGGCCTGGCGCGCGCACCGCAACCGCCACGACGGGGTGCGCGCGCACGCCTGCCCGCGCTGCCCTGCCGCCTTCTACTCACCGTCTGTGCTGACTAAGCATATGCGCACACATACCGGAATAAAACCATACGTTTGCAAAGTATGTCAAAAGGCATTCACTGGTAACAACAACTTGAAAGTGCACATGAGAGTTCACGgcgaatatttaataaaaaagaaagttaaaaatgaaGCAGAAAAAAagcgaaattaa
Protein Sequence: MKKCRACLKIEDNTVKMCQFDQKMIGYFNLLTNLDVKLNDIMPQQICESCAGMVTLFIEFRDKCISANSFLLDINISKNIKVEERINCDNIDIKIEHIKQEVDKYEEYLLSGHNVDDNIIYELSLNDEKCEEVHSNKLQRVNDNLSTPIYSCGLCIKECNDKSLLLIHLKEHESDNESICDLCKQKFSDWHQLFSHRLEHLTNKKEKECHLCSSKFTSPPYLEFHYKKVHSLINNPILKCLPCNENFTSPQKFQRHIWNCHLENKYICDCCSWRCNDENRFKNHIAKHKRHNIVEDGKSIPCDKNNATYNTNSTNSMFQCQSCSKCYPTSITLRKHIQREHFEKQYVCDYCFKEYGCKNELKCHIERHMGHKIYACDECEYTSKFSTNLKFHKIRKHTPKRVYCTVCSRVFTDQLTLDAHKCQLKSLVCSTCGKTFKAHKQLSRHMLSHEAAGRYACERCPARYRSRSAWRAHRNRHDGVRAHACPRCPAAFYSPSVLTKHMRTHTGIKPYVCKVCQKAFTGNNNLKVHMRVHGEYLIKKKVKNEAEKKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -