Basic Information

Insect: Dione juno
Gene Symbol: -
Assembly: GCA_037127375.1
Location: JAXRJS010000075.1:194478-200195[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0022 0.2 12.8 1.8 2 23 72 93 71 93 0.96

2 12 0.011 1 10.6 1.0 3 23 101 122 99 122 0.94

3 12 0.01 0.92 10.7 0.3 2 23 130 152 129 152 0.95

4 12 4.9e-05 0.0044 18.0 3.0 1 23 158 180 158 180 0.96

5 12 0.0069 0.62 11.3 9.4 1 23 186 208 186 208 0.95

6 12 0.00032 0.029 15.4 0.8 1 21 214 234 214 235 0.96

7 12 0.012 1.1 10.5 1.4 2 19 253 270 253 275 0.92

8 12 1.7e-06 0.00015 22.7 1.4 1 23 557 579 557 579 0.98

9 12 0.00014 0.013 16.6 1.4 1 23 586 608 586 608 0.96

10 12 0.22 19 6.6 0.1 3 23 630 651 628 651 0.89

11 12 0.25 23 6.4 1.9 1 23 657 681 657 681 0.95

12 12 0.0052 0.47 11.6 1.5 1 21 687 707 687 708 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0022	0.2	12.8	1.8	2	23	72	93	71	93	0.96
2	12	0.011	1	10.6	1.0	3	23	101	122	99	122	0.94
3	12	0.01	0.92	10.7	0.3	2	23	130	152	129	152	0.95
4	12	4.9e-05	0.0044	18.0	3.0	1	23	158	180	158	180	0.96
5	12	0.0069	0.62	11.3	9.4	1	23	186	208	186	208	0.95
6	12	0.00032	0.029	15.4	0.8	1	21	214	234	214	235	0.96
7	12	0.012	1.1	10.5	1.4	2	19	253	270	253	275	0.92
8	12	1.7e-06	0.00015	22.7	1.4	1	23	557	579	557	579	0.98
9	12	0.00014	0.013	16.6	1.4	1	23	586	608	586	608	0.96
10	12	0.22	19	6.6	0.1	3	23	630	651	628	651	0.89
11	12	0.25	23	6.4	1.9	1	23	657	681	657	681	0.95
12	12	0.0052	0.47	11.6	1.5	1	21	687	707	687	708	0.96

Sequence Information

Coding Sequence: ATGGAGTCCAATATATCTTTCTTCAGTTTACCTtttgttgACTCGGAGACTTCAGATCTAGtgttcaataaaaaagttgatGAATGCGACTATGATTTTCAAAGTGAATTACCTTCTCAAAGTGCTTTACTTGGTTCAGATGTTGAACTAGCACAATTATTGACTGCTGATGGACCTTTAGAAGAACCAGACCTAAATGGACCAGCCACTTTACATTGTGAAATTTGTCAAAAAAGATTTGACAACGCAAAAAAGTATTATGGACATTTGAGAGTACATTCTAAAGATAATCTTTGGATTTGTGagAAATGTCCAAATCAAAAATTTTCTACTAAGCAACAATTAATGAAACATAGTCTCACTCACAAACCACTAGCAAGAGTGTGGAAATGTCCACAATGTTCTATGGCATTTGAATCTCTATGGCGCCTTCAACAGCATGTATTCACAAAACACTTTGATTACagACCTCACAAGTGTGATCAATGTGAAAAATCATTTCAGAAGCCTTCTGATCTTAAAAAGCataaagatatacataatgatattaaaaaacattgttgCCCATGCTGTGAAAGGGAATTTGGacataaatctaatttaaaaaggcACATGTTGACACATACTAACGAGAAACCTTTTAGTTGTACAGGATGCAATAATAGATTTACACAGATAGCTTCACTGAAGCGACATCAAAAGAACTgcattttgttttctaatcACAACGAAACTGAGGATAAAACTAGAAAAAACTATTGCAAAGTTTGTGGGGagacatttcaatataaaagtgcACTACTAGAACACTGTGTAAGACAACATAGTAatgctaataataatgaagataaattacaaataagccAAGTCAATGCAGATACAAATAGAACTGAAGATAACATAGTTGATGACATACTGTCAGCGGAGGACGACTACATGACAATGTCTTCGCAAgccttacaaaattataaccaACCAGCCCTCCCAGACCAAAACACTTACGACAACCTAATGCAAATAGAATTTCTGAAGGAAATGAATCAACTTCACATTTTAGATGAAGATGAAGAAGATTTACTTTATAACGATATTGATTTTGATTCATTCaacactaataataatataaatagcgaCATAGATTATATGAACGATAGACATGGCATTTTATTTGATGATATGACAAACAAAAGCGTGGATCAAGATCTGATGAGTGCACTCTATCATGTCAAAACAGATTTACCAGATGATATATCCATTTTAAATCCAGAAACTCCTAAGCAAGTAGAAAATCAAACTACTGTTCCAGTTAATGAATGTGCCACTATTTTTGAGAGTGATGTTGATCTGGAAGCTAGTACCAATTTGGCGGCAAATTTGAATCAACTTATTGGTGAAAATACAGTACAGTATATATCTACTGAAGACGatgatatgtttattattagattgAACAGTGAAATAGATGCTGAACAACTGACCGACATGTTGAATATTGGTGTGGAGGTTGTCAACAAAGATAATGACAGTACTAAAGTGAATGATGAAACGTTAAATAAGGAAGTGGCTAGTGATAATATGCccgttgtaattaaaatagaaaatgtccGCAAGGAAACAGGGCAAGTGGACAGCTCTAAGCAGAATATTAAATGCAAGAAACAAGTGCTGTACGTGTGTTCTActtgtgataaaatatttaagaagaaaGACAATTATAGATCtcatatagCGACGCACAGCGCCGCGCTGCGCCGCCACCGATGCCGCGTGTGCGGCGCGCGCTTCAGCTACCGCTCCACGCTGGTGCGCCACGCCGCGCGACACCGCCCGCGCGACGCCGGCCCCGCCCCCGGCCCCGCCCCCGGCCCCGCCCCCGCGCCGCACGCCTGCGCGCCCTGCGGCCGCCGCTACGCCGCCGCGTGGATGTTAAAGAATCACATAGAGCGCGACCACGAGCGCCTGACGCCGTTCGCGTGCGACGCCCAAGGATGCGCCAGGAAGTTCTATAAGAAGTGCGATCTCGACGTGCACAAAAGatACCACACGGGCGAGCGTCCCTACGTGTGTAGCGTATGCCAGTTCGCGTTCCTCCACGTGTCGCACCTCCGGCGGCACCAGCGGCTCGTCGACTGCAAGCGAAGgcTTGAAAGACGACACAGGCTAGAACAACAagtaattaagaattaa
Protein Sequence: MESNISFFSLPFVDSETSDLVFNKKVDECDYDFQSELPSQSALLGSDVELAQLLTADGPLEEPDLNGPATLHCEICQKRFDNAKKYYGHLRVHSKDNLWICEKCPNQKFSTKQQLMKHSLTHKPLARVWKCPQCSMAFESLWRLQQHVFTKHFDYRPHKCDQCEKSFQKPSDLKKHKDIHNDIKKHCCPCCEREFGHKSNLKRHMLTHTNEKPFSCTGCNNRFTQIASLKRHQKNCILFSNHNETEDKTRKNYCKVCGETFQYKSALLEHCVRQHSNANNNEDKLQISQVNADTNRTEDNIVDDILSAEDDYMTMSSQALQNYNQPALPDQNTYDNLMQIEFLKEMNQLHILDEDEEDLLYNDIDFDSFNTNNNINSDIDYMNDRHGILFDDMTNKSVDQDLMSALYHVKTDLPDDISILNPETPKQVENQTTVPVNECATIFESDVDLEASTNLAANLNQLIGENTVQYISTEDDDMFIIRLNSEIDAEQLTDMLNIGVEVVNKDNDSTKVNDETLNKEVASDNMPVVIKIENVRKETGQVDSSKQNIKCKKQVLYVCSTCDKIFKKKDNYRSHIATHSAALRRHRCRVCGARFSYRSTLVRHAARHRPRDAGPAPGPAPGPAPAPHACAPCGRRYAAAWMLKNHIERDHERLTPFACDAQGCARKFYKKCDLDVHKRYHTGERPYVCSVCQFAFLHVSHLRRHQRLVDCKRRLERRHRLEQQVIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782076;
90% Identity: iTF_00458302;
80% Identity: -