Djun017127.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- Zfy2
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000067.1:9902675-9916005[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.13 11 7.3 2.8 1 23 266 288 266 288 0.96 2 14 1.6 1.4e+02 3.8 0.4 6 23 300 318 300 318 0.96 3 14 0.2 18 6.7 0.2 3 23 329 350 328 350 0.96 4 14 3.6e-07 3.3e-05 24.7 0.3 2 23 374 395 374 395 0.97 5 14 2.2e-05 0.0019 19.2 2.7 1 23 402 425 402 425 0.96 6 14 0.023 2.1 9.6 0.0 1 23 431 453 431 453 0.93 7 14 0.0002 0.018 16.1 1.7 1 23 459 481 459 481 0.97 8 14 0.0011 0.097 13.8 0.2 1 23 619 641 619 641 0.98 9 14 0.00028 0.025 15.6 0.5 2 23 648 670 647 670 0.91 10 14 0.00031 0.028 15.5 1.1 3 23 678 698 677 698 0.97 11 14 2e-05 0.0018 19.2 2.3 1 23 704 726 704 726 0.96 12 14 0.0083 0.75 11.0 0.1 1 23 732 754 732 754 0.94 13 14 0.0012 0.11 13.6 0.3 1 23 760 782 760 782 0.92 14 14 0.13 12 7.2 0.1 1 23 788 811 788 811 0.92
Sequence Information
- Coding Sequence
- atGGATTCATGCGTAGATCCAATGGGCTTATTACAAGTTCGAATTAAAGCCGAACCTCCAGACGATGGCGCTAGCACCAGCACCAGCCCTGCTTTTAATTATCATGCAGAACAAGAATTTATGGATTTAACGAAGACTTGCCGTATCTGCGGTGTGTCTAATGcatcaattttcaatatatttgctGAAGAATGCGAAAGAAAAAGGATTCCAGAGaagattaacaaatatttacctataaaggtGACGCAGGAGGATCTACTGCCAAAGACAATATGTGCCAGCTGCTTCATGTTAATATCGAACTGGCACGACTTAGTTACTCGTTCCAAGATTGTTGACTCTAAACTGAAAGCACAATATCGCATCGAGGGCCGGCTGCCGCCCAACGAGCCCGCGGAGACGGCAGGGAATAGAAATAAGGATGAAGAAATAGTGCCGGTCATAGAGAACTACACCTACAGCATACAAGAACAACATGGCTTGTCATCAGATCCACGTTTACTTTTCGCGATTGTTAAAAACGTATTGAATgacgattattttaaaattttggacATTGATAAGGAAGGATCAAGTCTAGAATACGTTTGCCAAATATGCCCAGGAAACCCCACTTCGAGGTCTATAGAAAATTTGTGCTCCCATTTAATTTGTTCTCAttgttctaatataataaataagaaaagcgttgaagaatttataaaagaaaatattacgtttGAAGAAATCTTAGATGATGACTTAGCTGATGGAGATCCAGAGCgaagagaaacaaaaatacatcTGCCAAACTACTTTTGTCCGTTTTGTGATAGTACTTTTTCGTCGCCAACTCGTCTTGTATGTCACttgaataaacatatacaagtAAACTTGGAAGACGGAGTGACATGCTGTGATAATCATTACCCTAATAAGAAGTCCTTCGTGGCCCATTTGCAAAAAGCTCACATAGTTAGAAACGTAGCGGGcaaagaaatatgtaaaagttgCGATTTTGCTACAAATGACATAGACAAGTTGCAATTACACATTAGTAAAGCTCACCCGGAAACAAAAGATAATGAAAAGCCCAAGAAAGATCCGAGTTCTAAAAATCAAAAGTTCATCCCAGCAGTCTGCCCTGAATGCGATAaagttttttcaaataaatataatatgctagttcatatgaaaaatcataataaaccGTCTATTAAATTCGCATGTCAAACTTGTAACAAAACTTACAAAAGTCGAGGAAACTTGTCCCATCATCAGAAAATAGCACATGAGGGACTGCTTCAGTTTGCATGTCCTCTTTGCGGAGAAGCGTTTCCGTCCAGAATGGCACGCGACGTGCACTCTAGGATTCACACTGGCAGCAAGCCGTTCTCTTGTCAATTCTGCGACAAGAGTTTTCGAGCTAAAAATACCCTGGATAGACACTTAGATATGCATTTAGATGTCCGGAAATGGTCACCTTACTCCGACCAGGATGATATTTCCGGAAATGCCACTGAGCATATAGTCGTCGGAACGGCTGCCGAATTTTATAGTGTCTCTAGTTCATCCGACGACGAACCTCTCGCCACTCTGGCGAACAAGAAAAAATCAGACCTATatcagaatttttatatagctttaaaaGATTTTCGGGACCATTTCGTGAGCGACCATCACGGACAGTTGAGTCACTCGGATTTCTCCGATTCGACTGAATCTAATTCCGACAACGATGGAATCGCGCAGGAGACGGATCCAAAGTACTACGACGACCTGACGGACTACAATGCGAGGTCAAACGGCACCGACGACGTCACGCGCGAGGAGCTGCAGGCCGCGCGCCGCCGCGTCGACGGCAAGCTCTGCTACGTCTGCGACGTTTGCGGGAAGGGCCTCAGCTCCGCGCACACCTACGTGTACCACGCGCGCATACACACGGGCGCGCGCCCCTGCGTCTGCCACGTCTGCGGCAAGCAGTTCCGCGCGCCCGGCGGCCTCGCGCGCCACCTCGCCGAGACGCAccagcgccgccgccgccgcgcctgCGCGCTCTGCCGCCGCACCTTCGCCAACGCGCACAACCTGCGCCAGCACGCGCGCCTGCACTCCGGCGAGCGCCCGCACGCCTGCCCGCGCTGTCCGCGCGCCTTCGCGCACTCCGGCTCCCTGCACGCGCACCTGCGCACGCACGCCGCGCGCCGCGCCCACGCCTGCGCGCTGTGCGGCGCCGCCTTCCGCCTGCGCGCCGCGCTCGCGCGCCACCGCCTGGCGCACTCCGGCGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCCGCTCGCGCCACGAGCTGGCGGCGCACGCGCTGGCGCACTCGGGCGCGCGGCCGCACGCGTGCGCGCTGTGCGCCGCCGCCTTCCGCCAGCGCCGCGCGCTGCGCCTGCACGCCGCGCGCGTGCACCCCGGCGCGCCTCTCGAGATAATAAACCGTACGAACTGA
- Protein Sequence
- MDSCVDPMGLLQVRIKAEPPDDGASTSTSPAFNYHAEQEFMDLTKTCRICGVSNASIFNIFAEECERKRIPEKINKYLPIKVTQEDLLPKTICASCFMLISNWHDLVTRSKIVDSKLKAQYRIEGRLPPNEPAETAGNRNKDEEIVPVIENYTYSIQEQHGLSSDPRLLFAIVKNVLNDDYFKILDIDKEGSSLEYVCQICPGNPTSRSIENLCSHLICSHCSNIINKKSVEEFIKENITFEEILDDDLADGDPERRETKIHLPNYFCPFCDSTFSSPTRLVCHLNKHIQVNLEDGVTCCDNHYPNKKSFVAHLQKAHIVRNVAGKEICKSCDFATNDIDKLQLHISKAHPETKDNEKPKKDPSSKNQKFIPAVCPECDKVFSNKYNMLVHMKNHNKPSIKFACQTCNKTYKSRGNLSHHQKIAHEGLLQFACPLCGEAFPSRMARDVHSRIHTGSKPFSCQFCDKSFRAKNTLDRHLDMHLDVRKWSPYSDQDDISGNATEHIVVGTAAEFYSVSSSSDDEPLATLANKKKSDLYQNFYIALKDFRDHFVSDHHGQLSHSDFSDSTESNSDNDGIAQETDPKYYDDLTDYNARSNGTDDVTREELQAARRRVDGKLCYVCDVCGKGLSSAHTYVYHARIHTGARPCVCHVCGKQFRAPGGLARHLAETHQRRRRRACALCRRTFANAHNLRQHARLHSGERPHACPRCPRAFAHSGSLHAHLRTHAARRAHACALCGAAFRLRAALARHRLAHSGERPHACALCPRAFRSRHELAAHALAHSGARPHACALCAAAFRQRRALRLHAARVHPGAPLEIINRTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -