Djun015690.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- bab2
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000064.1:1893548-1919518[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-08 7.4e-05 23.0 0.0 2 37 503 538 502 539 0.95
Sequence Information
- Coding Sequence
- ATGCAGGGGCTCGTGAGCGACAAGACGTTCCACTTGAAGTGGAACAACCACCTGCAGAACCTCAGCCAGCTGTTCACTACCATCTACTCGTCGTCGGCGCTGGCGGACGTCACGCTCTCCTGCCGCGATGGCACCCTCAAGGCGCACAAGCTCGTCCTCTCGGCGTGCAGCCCCTACTTCGAGCAAATATTCAAgGACAACCCGTGCCAGCATCCCATTGTGATACTGAAAGGCATACCTTTCTCCGAGATAAATCTGTTGGTGGAATTTATGTACAAAGGCTCAGTAGACGTTCAGGAACTGGATTTGCAGTCCTTAATGCACACAGCTTCTGAGCTAGAGATACGAGGGTTAGCATATGAGGCTAGAGACAATGCCGCACAGCTTTTGAATGTAAACTTAGAGTACCCCGCCTATGGACAGAATGCCACAACTGCTGCTCCTGCTACTTCCACTTCAGTTTCCACATCCCAGTCATACCCTCAAGCGCGAACAGACGTAGAAAGGTTGAAACAGataCACATGTACCAACAGTCCATGATGCGTGCTGAGGAGATACGTCGAAGGCGTCGCGAGGACATGCCCACCACACAGACAGCTGTAAATAATATCCTGGCGGCCGCTGCCAGGGAAATGGAGGAGGCGAGGCACGCGGCCAGAGGAGGAGAACGAGTAGTTGCCAGTATACAGACTGAGCAAGAAGCAGctgcagcagcagcagcagcggCTGCTGCAGCGGCAGCTGCAGAAGTGAAACGTGAGTTAGAAGAAGAAAGGCCTAAGAAGAGGGTGTCTATAATGTCACCAGAAGATGATAAACTAAGAGTCAAGAAGAAAGCCATGACCGTGCGCTTCCAAGAGGACAATAAGACTGATGAGGGCCCCGCCAAAATCACTTCACCGGGTGCCACAAACTCAAACAACGGCAATGACAAAGACGATATGAAACCGGGCAGTATCAAAGTTGTACAACTCGCTGTTCTACAGAAGCCTACGAACAACGAGCATGACGATTCAGACGAGAAAGCAAACAAACAAGGAATGGATGATGATGAGGAGACGGACTCCAGCGGATCGATATCAGACTCCGGTGCAAACGAATCTCAAGATGGACGTCCTCACGTATGCGATATATGTGACGTCAGGTTCGCCCGCTCGTCGCACCTGTCGCGCCACCGCCTCACGCACACCGGCGAGAGGCCCTTCACGTGCGGCGGCTGCGGGCGCTCCTTCGCGCGCTCCGACAAGCTGCGCGTCCACACCAAGATATGCGAACGGGTACAATCAAAACAAAACTTGCAGGAGGACCCCACTGTTGACATGAACAGTGACATCACTGTGAAGAGGGAGAACAATTCCGAAGTGATGTCGGGAATGGTGCGCACCACGCACCGCGAGTCCGGCCATCTCGTGTTCACGCCCAGCGGGGACGTCATGCTGCCTCCGCGTAATCAGgAAACCGAAGAGGTCACATCTGAAAAGCCCAGCATTTTTAGAAAATGGTCAGATGAAACTATGATAAAAGCGGTAGACGATGTcacgaataataaattaacggTTGTGGAGGCTAGTCGTGTGCACGATGTTCCTTTGAAAACTTTGCGTAGACATATTGTTTGGTCTTCGAAAGGGGAACCGATTGTCAGTCGAGCTTTAAGACTAGGACCCGAAAGTGAACAGAAAGTCATTGCTCACGTGAAGCGCCTGAAATCTATTAGATATCCTCTAAACAATACTCGCGTAAAGtccattatttatgaatttatagagaaactaaaattaccccataaattcaataaagacAAGAAAGAAGTTGGCCGCGATTGGTTTAAAGGGTTCATGAAAAGACACCCAGATGTCAGTACCAGTAAGGAAGAAGATTTATCGCTTGCTAAAACTATGGGTATCAACCGGGAGGAAATAAACAATTACTTTGAAGCGTTATCAAAATTGCTAAACGAGAATGACTTTCTTGACAAACCTGATCGTATTTACAACATGATTGAAAATAGTATACCAGTTAACAGTAAAATAGCGCGCGCTACACCTTGGGCTAGCAAAAGTGAAAGTTCCAATATAGAGTGTGAAAATATGTCTTTGATCTCGTGTTGCAATGCTCAGGGCACGTTTTTACCTCCCGTTTTAATTATGAAGGGGAAAGATTCCAAGCCAAAAATTTCCGACGACCTACCTCCAGGCTCGGAGgtctatataaatcaaaaatcgTCATACATTAACGCCGAATTATTCTTCGAATGGATGAAGGATCATTTTATTCCGCGAAAACCACGCGGAAAAGTTCTTTTGATTTTGGATCCGTATTACTCCCTCTCGTACGCCTTTGAAATGCTTCAAATAGCTGAGGAGAACGACGTCATCATACTGTGCCTACCAAGCCATACTACACAAACTCTAAACCCAATGGACAAGGCGTTTTGTAAGCCTTTCAACGGTTATTTCGCTACTGAAGTCACAAAttggtatattaataatgaaggaAGCTGTTTGAATCCCTATCATATTACCAAGTTGATAGCCAATACTTGGTGCAAGTTCGCCGTATCTGCAGCAAGCGTTTCAGGGTTTACGTCAACTGGAGTGTATCCTCATGATCCTAACATAGTTGCCGAATTACTCAAACCGCCCGAATCGATTTCAAACCAAAACATTCCTACAATTCAACAGAATAGtagtaataatgaaatatcttGTTTAGAATGTCAAGAGATTCAGGATGTTACCAAACCTAGAAATGAATGGTTCCGATGCGCCCATTGTGCTAATTGGTTGCACAGGGAGTGTACCCAACACGACGACAAATGCAACAAATGCAGTGCCAAAAATAAAGGAATTGGGAAGAAGAGCGGTGGAAAATACACATTTACTTGA
- Protein Sequence
- MQGLVSDKTFHLKWNNHLQNLSQLFTTIYSSSALADVTLSCRDGTLKAHKLVLSACSPYFEQIFKDNPCQHPIVILKGIPFSEINLLVEFMYKGSVDVQELDLQSLMHTASELEIRGLAYEARDNAAQLLNVNLEYPAYGQNATTAAPATSTSVSTSQSYPQARTDVERLKQIHMYQQSMMRAEEIRRRRREDMPTTQTAVNNILAAAAREMEEARHAARGGERVVASIQTEQEAAAAAAAAAAAAAAAEVKRELEEERPKKRVSIMSPEDDKLRVKKKAMTVRFQEDNKTDEGPAKITSPGATNSNNGNDKDDMKPGSIKVVQLAVLQKPTNNEHDDSDEKANKQGMDDDEETDSSGSISDSGANESQDGRPHVCDICDVRFARSSHLSRHRLTHTGERPFTCGGCGRSFARSDKLRVHTKICERVQSKQNLQEDPTVDMNSDITVKRENNSEVMSGMVRTTHRESGHLVFTPSGDVMLPPRNQETEEVTSEKPSIFRKWSDETMIKAVDDVTNNKLTVVEASRVHDVPLKTLRRHIVWSSKGEPIVSRALRLGPESEQKVIAHVKRLKSIRYPLNNTRVKSIIYEFIEKLKLPHKFNKDKKEVGRDWFKGFMKRHPDVSTSKEEDLSLAKTMGINREEINNYFEALSKLLNENDFLDKPDRIYNMIENSIPVNSKIARATPWASKSESSNIECENMSLISCCNAQGTFLPPVLIMKGKDSKPKISDDLPPGSEVYINQKSSYINAELFFEWMKDHFIPRKPRGKVLLILDPYYSLSYAFEMLQIAEENDVIILCLPSHTTQTLNPMDKAFCKPFNGYFATEVTNWYINNEGSCLNPYHITKLIANTWCKFAVSAASVSGFTSTGVYPHDPNIVAELLKPPESISNQNIPTIQQNSSNNEISCLECQEIQDVTKPRNEWFRCAHCANWLHRECTQHDDKCNKCSAKNKGIGKKSGGKYTFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00778442;
- 90% Identity
- iTF_00457358;
- 80% Identity
- iTF_00457358;