Djun007748.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000038.1:2840960-2842132[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-08 0.0001 22.6 0.0 2 41 20 59 19 62 0.91 2 2 0.61 1e+03 0.2 0.0 28 41 365 379 364 381 0.90
Sequence Information
- Coding Sequence
- ATGCcaagaaaatacaaaagaaaagaagGTGTACAAGCTCGAGTAGTTTCTTGGACAAAGGAGCAGTTACAGTCAGCTTTCaaagaaattgataaaaagaaattggGAATCAATGAAATATCTAGGCGATTTGGGATTCCGTCTAGAACATTACGACGGcgttatgaaattaaaaatgaaatgaatttgaCTTTGGGCAAACGTCCTGTCCTAGGTTTTGAAAATGAGCGAACGTTGGTAGCGTACATTATGAAGCTTAGTGACATGGGATTTCCTCCAAATAGACGATCCATATGTAAGTTAGCATATCACTTTGCCGAAAAGTTACagattaatcataattttgataaagaaAACGAGGTGGCTGGTAATGAATggtttaaaagctttattgaGCGAAATCCAGATTTATCTGTAAGGCAAGCCGAAGTTTTACCTGTGTCCGGATCCAAATGTCTTAGAACAGATCAACAGAATAAATTTCACGAAAATCTGAGCAAAATCTTGAGTGACAATGACCTATTGAATAAGCCTGAGAGAATTTACAATATGGACGAATTAGGAGTTCAGCTTAACAATAAGCGTGAAAAGGTTGATTCAATATCATTTGTGGAGAAGAGGGAAACGGTGACTATCATAGCTTGTTGCAATGCTATTGGTAATTTTCTTCCACCAATAATAATCGTTGAAGAGGTGAATAAGAAATCAAAACTGGAGAACGGTCTACCACCAGGCTCAAAagtgtatattaatgaaatgtctccaaatataaatactcatCTTTTCTATAAATGGTTCACGGAACACTTCATAGCTCTTAAGCCCCAAGGGAAAGTTTTGCTAATTATAGACGGGCATCCATCACATTCATCTGCACCGGATATGCTTGAAATTGCTTCCAAAAACAACGTTATTCTATTATGCTTACCCAGTCACTCATCTTCAACCATTCAACCGTTAGATACAGTTTTTGGGCCATTTGGTACTTTTTTCGAAAATGAAACTAATCAGTCCAAGCGCACAAATTCTAATGAAAGGATAACTCATCATAATGCTGGAACTTTTATAGGAAATGCATGGCTACACGCTGCTATACCAGCAAATACCCTTGATGGCTTTAGAAAAAGCGGAATTTATCCATTTGATTCTAGTGCTTGGTCGGATTCTCTTTGA
- Protein Sequence
- MPRKYKRKEGVQARVVSWTKEQLQSAFKEIDKKKLGINEISRRFGIPSRTLRRRYEIKNEMNLTLGKRPVLGFENERTLVAYIMKLSDMGFPPNRRSICKLAYHFAEKLQINHNFDKENEVAGNEWFKSFIERNPDLSVRQAEVLPVSGSKCLRTDQQNKFHENLSKILSDNDLLNKPERIYNMDELGVQLNNKREKVDSISFVEKRETVTIIACCNAIGNFLPPIIIVEEVNKKSKLENGLPPGSKVYINEMSPNINTHLFYKWFTEHFIALKPQGKVLLIIDGHPSHSSAPDMLEIASKNNVILLCLPSHSSSTIQPLDTVFGPFGTFFENETNQSKRTNSNERITHHNAGTFIGNAWLHAAIPANTLDGFRKSGIYPFDSSAWSDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -