Djun000196.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- ttk
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000003.1:1383069-1386179[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-16 6.4e-13 48.8 0.0 2 42 348 389 347 392 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAGCAGTACAGTCTGCGATGGAATAACCATCaaccaaattttatatctatgtttGGTACACTATTGGCTACAAAAAACTTAGTAGATGTGACTCTAGCTGCTGAAGGTCAACATCTAGTTGCACATAAAGTAGTGCTGTCAGCATGTAGTACATATTTTCATTCACTATTCATAGACAATCCTTCACATCATCcaatagttattttgaaagatGTTACATTTAATGATTTACGAACAATGGtagattttatgtattatggaGAAGTTAATGTCACAGAAGAACAATTACCACAAgTGTTAGAAAcagcaaaaatattgaaaatcaaaGGATTAACAGAAATGCCAGATTCTACATCTTTAACTAGATCTCAAGGATCATCAGCCGACTTGCCTACTGCAGAAAACTCTAATGAGACACTAAGACCTTCAATTTCCACTCCTTCTCCAAATTTAAGACCAAAAAGgCGTAGAATGAGTTCTACAGGCTCAGTGGGAAACTTAGGTGTGGATGATAATAGAAGCAATGACTGTGGGCAAAATATGGACATGATGCGCGAGGCAGTCACATTAAGCAGTTTGCCACAACAAAAACGTAGGGAAATGGATGAACGGATAGATAATTCACAACAGactgGAGACTCATCAAGCATTAATATAGATCAACTTGCCATGGAAGCAAATTCTGCTGTCGGTATGTCACAAGGCCAATGGAGTATGCTGGAGCATACATACCCGCGGTATTCTAACGCATGCCTCGGCGGCGGCGGGCTGCAGCCCGACCAGGGCATGTACCTCAACAACGTGATGAATCCACACGCGCACGGCCACCCTGACCCGGACATGGCCGGCTACGGACAGGTGCTCGGCGCCATGGGCGGCCCAGCGCCCGGCCCCAGTTGTGTGGGAGGGGGTGTGGTTGCAGGCGGCATGGGCGACATGCACGGAGGAATGCAAGGTGGTGGTCTGCCGGGGGGTGGCATGGGCGCAGCTGGCGCGCAAGTTCCGAAGCGACGGCGCACCACCAACCCCCAGGGAGAAGAGAACTTCCAGCGCGCGCTGGAGGCGGTGCGTTTTGGAGGCATCGGATTCTGTAAGGCGGCACGCATGTTTGGAGTGAACAACCGCACGCTCTGGCTGGAGTACAAGAAGAAAGGCTATCCTAACAACCGGCCCAGCATCAAGAGCCGCATCAAACGTGAGCACGTGACGCCGCCGCCCAAAGAGGAGCCACCGGCGCAGGACGCGCAGCTGGCTCTACTGTGTCCGCCTCACGCCGTGCCTGTGCCCTTCCTGGACGCACGCCCCGTGGAGTTCAACATCATCAACGGGGTGAATTTCCCGCTGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFGTLLATKNLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFIDNPSHHPIVILKDVTFNDLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGSSADLPTAENSNETLRPSISTPSPNLRPKRRRMSSTGSVGNLGVDDNRSNDCGQNMDMMREAVTLSSLPQQKRREMDERIDNSQQTGDSSSINIDQLAMEANSAVGMSQGQWSMLEHTYPRYSNACLGGGGLQPDQGMYLNNVMNPHAHGHPDPDMAGYGQVLGAMGGPAPGPSCVGGGVVAGGMGDMHGGMQGGGLPGGGMGAAGAQVPKRRRTTNPQGEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPKEEPPAQDAQLALLCPPHAVPVPFLDARPVEFNIINGVNFPLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00774591;
- 90% Identity
- iTF_00458170;
- 80% Identity
- iTF_00457338;