Basic Information

Insect: Diogma glabrata
Gene Symbol: -
Assembly: GCA_963693315.1
Location: OY856188.1:131224126-131231417[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 5.5 1.1e+03 2.8 3.5 3 23 222 243 221 243 0.95

2 21 0.3 61 6.8 0.7 6 23 258 276 255 276 0.93

3 21 2.1 4.3e+02 4.1 4.4 3 23 296 317 295 317 0.93

4 21 1.3 2.6e+02 4.8 0.4 2 11 329 338 328 351 0.82

5 21 0.025 5.1 10.1 1.2 2 23 557 579 557 579 0.93

6 21 0.0011 0.22 14.5 0.0 1 23 583 605 583 605 0.97

7 21 0.0087 1.8 11.6 0.7 1 23 611 633 611 633 0.98

8 21 0.0006 0.12 15.3 0.2 1 23 639 661 639 661 0.98

9 21 0.0023 0.46 13.4 0.3 1 23 667 689 667 689 0.97

10 21 0.014 2.8 11.0 4.2 3 23 697 717 696 717 0.98

11 21 0.4 81 6.4 2.0 3 23 933 954 932 954 0.96

12 21 0.38 78 6.4 4.1 1 23 1005 1028 1005 1028 0.94

13 21 1.7 3.6e+02 4.4 4.0 3 23 1041 1062 1040 1062 0.92

14 21 0.094 19 8.3 2.4 2 23 1067 1088 1066 1088 0.91

15 21 0.0085 1.7 11.6 1.1 1 23 1192 1215 1192 1215 0.94

16 21 7.6e-06 0.0015 21.2 0.8 1 23 1219 1241 1219 1241 0.98

17 21 0.038 7.8 9.6 1.0 1 23 1247 1269 1247 1269 0.98

18 21 0.00031 0.064 16.1 2.5 1 23 1275 1297 1275 1297 0.99

19 21 0.013 2.6 11.1 0.1 1 23 1303 1325 1303 1325 0.98

20 21 0.00079 0.16 14.9 4.2 3 23 1333 1353 1332 1353 0.98

21 21 0.00043 0.089 15.7 2.8 1 23 1359 1381 1359 1381 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	5.5	1.1e+03	2.8	3.5	3	23	222	243	221	243	0.95
2	21	0.3	61	6.8	0.7	6	23	258	276	255	276	0.93
3	21	2.1	4.3e+02	4.1	4.4	3	23	296	317	295	317	0.93
4	21	1.3	2.6e+02	4.8	0.4	2	11	329	338	328	351	0.82
5	21	0.025	5.1	10.1	1.2	2	23	557	579	557	579	0.93
6	21	0.0011	0.22	14.5	0.0	1	23	583	605	583	605	0.97
7	21	0.0087	1.8	11.6	0.7	1	23	611	633	611	633	0.98
8	21	0.0006	0.12	15.3	0.2	1	23	639	661	639	661	0.98
9	21	0.0023	0.46	13.4	0.3	1	23	667	689	667	689	0.97
10	21	0.014	2.8	11.0	4.2	3	23	697	717	696	717	0.98
11	21	0.4	81	6.4	2.0	3	23	933	954	932	954	0.96
12	21	0.38	78	6.4	4.1	1	23	1005	1028	1005	1028	0.94
13	21	1.7	3.6e+02	4.4	4.0	3	23	1041	1062	1040	1062	0.92
14	21	0.094	19	8.3	2.4	2	23	1067	1088	1066	1088	0.91
15	21	0.0085	1.7	11.6	1.1	1	23	1192	1215	1192	1215	0.94
16	21	7.6e-06	0.0015	21.2	0.8	1	23	1219	1241	1219	1241	0.98
17	21	0.038	7.8	9.6	1.0	1	23	1247	1269	1247	1269	0.98
18	21	0.00031	0.064	16.1	2.5	1	23	1275	1297	1275	1297	0.99
19	21	0.013	2.6	11.1	0.1	1	23	1303	1325	1303	1325	0.98
20	21	0.00079	0.16	14.9	4.2	3	23	1333	1353	1332	1353	0.98
21	21	0.00043	0.089	15.7	2.8	1	23	1359	1381	1359	1381	0.96

Sequence Information

Coding Sequence: ATGGAGAACATTTGCAGAATTTGcttagaaaaagaaaataatatggTCTCGATAAATCATGTATCAGCGTTTGAAAATACAAACATTACAATTCAAAACATGATTGCTGTTTCTACAGGACTGgagGTATCTAAATACGACAACTATCCGGAAGTAATTTGCCAGAATTGTCAAATCTTACTAACAATGGCTTATAAATTTCGGGAAAAATGTTGGGAATcgaatacatattttaaaaatattgaagcGAAAAGTACCACAAATATATCAAAACACAATGTAGGTATTCAGAATGTAAGTTATGTTAACACAGTGGTGCAGCCTAAAAGTTTGGAAACATTCCAGGATTGCTTTGTTGATACGCTAGCTAATCCAACTCCTgtaattgacaaaaaaatgaTGTCCTGGACTCAGTCGTACAACCAAAACGATAATAACAAAGAAAGTTTTATCCAAATTAAacatgaaagtgaatttttAGTAAAAGTGAAGACAATGGAGGATACCGAGGAAATTCGTATTGATTtactttcagaaaaaaattataccAACGAAAAGTTTGAtccaaaagaaaatataaaacaatcCGTGTATAATATAGATGAGAAAGATAGTAACAAACTCACAAAGCAAGTTTGtgattcaataaaattaatcCGTTTTTGTTATCTTTGTAATATAAGATGCAGTAATATTCATGTTTTACGAACCCATATACAAAATGATCATAAGAATGTTGTTGATGAAGGACGGTTAgtttataaatgtttttgtaGTAAAGCGTTTAAAAATTCTGAAGCCTTTGATGCACATATTACTAGTAATCATCAAATTTCAGTAGAATGTAATGCAAGATTAAATGATTCTCTAAAATGTTGGCGTTATTGTTATAAGTGTAAAttaaagtttgaatatttaaaatatttaaaacagcATTTTCACAAAGTACACAGAGCTGAATTAGATGAAAcaaaattggtaaataaatgCAATCTGTGTAATAAGCGATTTAAACTTTTTCGTATATTAAAAGGTCATGTTGCTGCTAAACATGTTAATAAATTAGATTGTATTTATTGTGGTTTAACTCTTAATAGATGCGATTTAATTGAACATATGTACCAAGATCATATGCAACCAAATAACGAAATACCCGAGTACACAATAAAAAACAGCCCTTGTAACTTAAATAAAACAGTTATCTCACCTAAACGATCATCGTCTTTTTCGAAAAATTACGATAACATCGGTCAACATAGCGATGAATATTTggaagaaattttaatttttgaaacacAAAGTTATGATCACGATTATATGTTATCAACCAAGGATGATGTGCCATCACataaaacaaatatcgaatCTGATATGTATACTGAAAAACATCGGAAAAACCAAAACATAACTTTTAAAAAGAAAGAATCAAAGGAAATCGTTTTGAATGAACTTTTGGACGTATTTTCTGCAGATACAATATCTAACGATTCATCAGAGCCTACATTGATAGTAAAAGAAGGTTCGGATACGAATTTAAACGTAGGTTTAAAGAGATCAAAACGTCGTAAATGTTATTTATGTGAAGATAgattacataatttaaaaacgTTAGCCGATCATTTAAGAATTACacataaaacaaaactagaTCCCACTCGATTGGTGAATGAATGTGAAATTTGTCAAGAATCATTTGAAACTTATCTCGATTTATCAAGACATCATACCAACCAACATAAACAAACATACGTTTGTGAAATTTGTGGAGCAAAtctaaaaactaaaattagtCTTCAAGATCATATAAACGCTCATTTAGGAAGAAAACCATATAAATGTGAAGAATGTGATTATAAATCCGCGCATCAAAGGTCAATATCGATTCATATGGCAGTTCATTCAAAAGGGAAAAAATATGAATGTGAAGTATGCAAAAAACCTTTTGCAACCGCCAGTGGAAGAAGTGACCACAGACGAATTCATTCTGATGAACAACCGTTCCAATGTCTGGTGtgtggaaaaaaattcaaaaaaccagCAATTTACAAAGAGCATATTTTAATTCATGATGTAAGCCGACATGTTGCTTGCAAATATTGTGGAAAAAAATTCTCTtgtaaaaacaatttaaaaccACATTTAAAAACGCATACAGGAGAAAAGACATACTTTTGTGGTATTGAAAACATCATGATATCTTCTAAAGATATGATTGCTTTTACTACTGGACTAGAAGTATCAAAACATGATAACTTATCACAGTTCATTTGTCAGAACTGTCAGCGTTTCCTGACAAAAGCTTATAAATTTCGGCAAACATGTTGGGCATCTAACAagcattttaaaattattaaagaagaaaaaaatttattaaaactggaAATTGATATTGTTAACTCAAATACGTGCCACAATTCGTTCCAAGATAATTCTATCCGGTCTAACAACGCTTTCAGTGGTTCTAACGATAACTTTGAAAATAGTTCAGGTGACATGTATTCAGAAGAACTAACTGGGGATAATTCTTTCCTAAAATCCGAATTTTTTCATGAGCGTAAAATCTGTAACACAAAATTTGATGATAATGATTTACACATAATTGTGGAAGATATATATGACGATAATTCtgttgaatttaaaaatgagTTGAACGAAAATgtatcaaacaaaaattatgacGAAAATCTGAGGAACGAAAATCAggataataataaattattcgTTTATGATGCACCGAATATAGAGACTAAAAGTCTAACAATACAAACGtgtgatttattaaaattaacacgATTTTGTTATGTTTGTGATAAAAGATGCGATGGTATAAATAAACTGCAAACACATATGCAAAATGATCACAAAGGCAATGTTGACGAAGCAatgttaatttataaatgtttttgtaaCAATCACTTTAGATCTGCTGTATCCTTTAATGAACATGTTATTAGTGATCATCAAATGTCTGTAGAAAGCAATGCAAAATCGAATGACCATCTTAAATGTTGGCATTATTGTTATAAgtgtaaattgaaatttgaatatttgatcAATTTGAAACAGCATTTTCTCAAAGTACACAAAGCAAGTCTAGATGAAAAAAGATTGGTAAATAAATGTATTCATTGTAATAAACAGTTTAAACTGTTTCGTATGCTAAAAAATCATGTTGCTACCAAGCATGTTAATATATCAAAATGTAGTTATTGtggtttaatttttaataaaaattgtttaattaaacatttatacGAAAATCATATGCCATTAAACCTAGAAACAAACAAAcacatagaaaaacaaattgataGCTCAAGTAAACCACTATCAATGaccaatttaaaaattagtgGTACCTCTCATAAAATAATTGAAGATAAAACCGGCCCTGATAGAATTATTACTACATCACTTATTTCTGAGAAAAATGAAGACATTAATAAACACAATGCGGACATTTTAGAAGAAACTAAGGATGCAGAATATTCAGATGTTGGCTCTATATTATATCCCATAAAGAATAATTGTATGCCTTTACGAGAACTACAAATATATGTAACTCGATTAGTGCATGAATGCGAAATTTGTCAAAGGATACTAAGTACTTATGAACAATTATCAAGGCATTATATCAATCAACATAATCCAACATATGTTTGTGAAATTTGTGGCAAACatgtaaaaactaaaaaaagtcTCCAAGATCATATAAACGTTCATTTGGGGAAAAAACCATATAAATGTGATAAATGCAATTATGTGGCAGCGCATCGAAGGTCGATATCAATACATATGTCGGTTCAttcaaaagaaagaaaatataaatgtgACCTTTGCAAAAAGACATTTAAAACTGCCAGTGCAAGAAGTGATCACAAGCGATCCCATTCTGAAGAAAAACCATTTGAATGCCTGGTATGTGGAAATAGATTTAAACAACTAGGAGTTTACAAAGAGCATATCTTGATTCATGATGCCAGTCGGCATGTTGCTTGCAAATATTGTGGGAAAAAATTCTCGAGTAACAAATGCCTAAAGCCACATTTAAAAACTCATACTGGGGAAAAGTCACATATTTGTGTTGTATGTGGAAAAGGATTTATCCAGAAACATTCGTGGAGAAATCATTTGAAAAGACATCCGTCCGTTATGTccgaaaaaaaatgttga
Protein Sequence: MENICRICLEKENNMVSINHVSAFENTNITIQNMIAVSTGLEVSKYDNYPEVICQNCQILLTMAYKFREKCWESNTYFKNIEAKSTTNISKHNVGIQNVSYVNTVVQPKSLETFQDCFVDTLANPTPVIDKKMMSWTQSYNQNDNNKESFIQIKHESEFLVKVKTMEDTEEIRIDLLSEKNYTNEKFDPKENIKQSVYNIDEKDSNKLTKQVCDSIKLIRFCYLCNIRCSNIHVLRTHIQNDHKNVVDEGRLVYKCFCSKAFKNSEAFDAHITSNHQISVECNARLNDSLKCWRYCYKCKLKFEYLKYLKQHFHKVHRAELDETKLVNKCNLCNKRFKLFRILKGHVAAKHVNKLDCIYCGLTLNRCDLIEHMYQDHMQPNNEIPEYTIKNSPCNLNKTVISPKRSSSFSKNYDNIGQHSDEYLEEILIFETQSYDHDYMLSTKDDVPSHKTNIESDMYTEKHRKNQNITFKKKESKEIVLNELLDVFSADTISNDSSEPTLIVKEGSDTNLNVGLKRSKRRKCYLCEDRLHNLKTLADHLRITHKTKLDPTRLVNECEICQESFETYLDLSRHHTNQHKQTYVCEICGANLKTKISLQDHINAHLGRKPYKCEECDYKSAHQRSISIHMAVHSKGKKYECEVCKKPFATASGRSDHRRIHSDEQPFQCLVCGKKFKKPAIYKEHILIHDVSRHVACKYCGKKFSCKNNLKPHLKTHTGEKTYFCGIENIMISSKDMIAFTTGLEVSKHDNLSQFICQNCQRFLTKAYKFRQTCWASNKHFKIIKEEKNLLKLEIDIVNSNTCHNSFQDNSIRSNNAFSGSNDNFENSSGDMYSEELTGDNSFLKSEFFHERKICNTKFDDNDLHIIVEDIYDDNSVEFKNELNENVSNKNYDENLRNENQDNNKLFVYDAPNIETKSLTIQTCDLLKLTRFCYVCDKRCDGINKLQTHMQNDHKGNVDEAMLIYKCFCNNHFRSAVSFNEHVISDHQMSVESNAKSNDHLKCWHYCYKCKLKFEYLINLKQHFLKVHKASLDEKRLVNKCIHCNKQFKLFRMLKNHVATKHVNISKCSYCGLIFNKNCLIKHLYENHMPLNLETNKHIEKQIDSSSKPLSMTNLKISGTSHKIIEDKTGPDRIITTSLISEKNEDINKHNADILEETKDAEYSDVGSILYPIKNNCMPLRELQIYVTRLVHECEICQRILSTYEQLSRHYINQHNPTYVCEICGKHVKTKKSLQDHINVHLGKKPYKCDKCNYVAAHRRSISIHMSVHSKERKYKCDLCKKTFKTASARSDHKRSHSEEKPFECLVCGNRFKQLGVYKEHILIHDASRHVACKYCGKKFSSNKCLKPHLKTHTGEKSHICVVCGKGFIQKHSWRNHLKRHPSVMSEKKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -