Dgla079516.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- TY3B-I_1
- Assembly
- GCA_963693315.1
- Location
- OY856188.1:103738530-103779059[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.087 18 8.5 4.7 1 23 1359 1381 1359 1381 0.98 2 12 0.012 2.5 11.1 1.6 1 23 1387 1409 1387 1409 0.98 3 12 2e-06 0.00041 23.0 0.6 1 23 1413 1435 1413 1435 0.97 4 12 4.4e-05 0.0089 18.8 1.5 1 23 1440 1462 1440 1462 0.98 5 12 1.1e-05 0.0022 20.8 0.7 2 23 1481 1502 1480 1502 0.97 6 12 8.3e-05 0.017 18.0 1.2 1 23 1508 1530 1508 1530 0.98 7 12 5e-05 0.01 18.7 4.8 1 23 1561 1583 1561 1583 0.98 8 12 3.8e-05 0.0078 19.0 1.6 1 23 1589 1611 1589 1611 0.99 9 12 0.16 32 7.6 0.7 3 23 1665 1687 1663 1687 0.92 10 12 4e-05 0.0081 19.0 2.3 1 23 1749 1772 1749 1772 0.97 11 12 0.054 11 9.1 5.7 1 23 1907 1930 1907 1930 0.94 12 12 0.84 1.7e+02 5.4 0.9 2 23 1968 1991 1967 1991 0.92
Sequence Information
- Coding Sequence
- ATGGCGACAATAACACTCCCAGATTTTATCGAATCGGACCCAGGGTTGTGGTTTTTGTTAGTAGAAAACTTATTCGCTACAAAAGACATTACCGACGACAAACAACAGTTCGGCGCAGTGTTAGCTTCACTAAAACCAAAGGTTCTTGCTATCGTTCGCCCTCTTTTGATAAATCCTCCCACAGAAAATCGCTATGAAACTCTGAAAGCTAAAATCATTAGCTTACTTTCAGAATCAGAGCAAATTAGTATCGAAAAACTGTTAAAAACCGTAGATATTGGCAATCAAAAGCCTTCTTCATTCTACGACCAGCTACTTCTTATAGCTGGGGATTCTACCGCGGTCACACCTGAGCTTATTAAAAATCTCTGGCTCGCTCGACTTCCTTTAGGTGTGAAAACTGTCGTCGTTGCAGTACAGAGTGACGACATCCAAAAATTGCTACCAGTCGCGGACAGGATTTGGGAAGCAATTAACGGTTCCCCTTCTTGTGGTAATATAAACCAGTCTAATGTCGAAAAGGCCAAGGCACCTTCGACATCTACAGAGATCTGGCAACAACCACAATATCCATTCGAGAAGATGTTAGAACAACTAACATCTTCTTTTAATAATATGAAGTCACGTCTGGACAACTGGGAAAACAACTTCCAGAGGTCAAGATCTCGATCACCTTCTAGGTACTCGTCCTTTCGACGAAACAACTTTAGACCTAGAAGCAGATCACCTTCATCTAAAAACATTTGTTGGTACCATCGAACGTTTGGACCGAAAGCTGCAAGATGCACTACAAGCCGTCTGTTCGTCAGGTGTTTCAATACGAATCTTGAATTTCTTATTGACACAGGCGCTGATGTATCAGTGATCCCGTGTCAATCTTTTTCAAACCTAATTAAAGACGAACACAATGTCCTGACAGCCGCTAATGGATCTATGATCCACACTTTTGGTACTAAATTGTTGAATTTAGATTTGGGTCTCCGTAGAGAACTACGGCATACATTTGTCGTAGCATCAGTAAGTAAACCTATTATAGGTGCTGACTTTCTGACCAAGTTCTCATTGATTGTCGATCTAAAGCGTAAACGCTTACTAGATACTAGTACACAATTAACAGTGAATACTATTTCGTACTCATATAGTACGCCTTCACTGCGCTTGTACAATATTCAAGGAAGTTATGGAGACATGCTCCAAGACTTCCCATCTCTCACTCAGGAACCCAAATATAACGCTCCAGTCAAACACAACGTGGTTCATCGAATTATCACAAAAGGACAATTACCTTTCTCTCGACCACGTAGACTAGAAGCTACTAAAttcaaaattgcaaaagacGAATTTTCGCATATGGCCCAGCTAGGATTGATTAAACCATCCTCATCTTGTGCTTCATCTCCACTACATTTGGTTCCAAAGAAGGATCAAAATGATTGGAGACCTTGCGGGGACTATCGACGTCTGAATGATGTTACCATCCCAGATCGATACCCCATACCACATATACAAGATTTTTCCATGCATCTTCACGGATGCACTGTATTCTCCAAAATCGATCTTGTCCGGGCTTACCACCAAATACCAGTCGCTGCTGAAGATATCCACAAAACTGCGATAACTGTTCCGTTTGGTCTCTTTGAATTCCTTAGAATGCCTTATGGTCTGAGAAACGCAGCTCAGACTTTCCAGCGTTTTATGGACGAAGTGCTCAAGGGACTAGACTTCGTATTTGCTTATATCGACGATGTTTTGGTGGCAAGTAATTCTCCACAGGAACACCAAAATCACTTACGCATTCTTTTCAAAAGATTATCTGATTTcgatattaaaatcaaaatttctaaaTGCGTATTTGGCGTTCCTTCTCTTGATTTCTTGAGCCATGAAATCACAAAGGATGGCATAAAGCCATCCCCAGATCGAATCATGGCCATACAAGATTTTCCTCAGCCAATTTCAGTTCGCCAGGTTCAGCGATTTGTGGGAATGGTAAACTATTACCATAGATTTATACCCCACTTAGCCGAGCTAATTGCTCCTCTACATGGCTATCTTGCTGAACTAGCCAAGATAAAAAAGAAGTCAGCATTTGTCTGGCCCCTCCAATGCAGTACAGCCATTGACAATGTCAAACTGGCGCTTGTAAACTGTACACTCTTGGCTCATCCGTTACAAAATGCAAGCTTTTGTATCAAAACGGATGCTTCAGGTACTGCAACAGGAGCAGTATTAGAACAATTAAACAAAGGAAGTTGGCAACCATTAGGATTTTTCTCCCGAAAACTCTCGCCTGCAGAGAAAAACTACTCTACTTTTGATCGCGAATTATTGGCTATTTTTCTAGCTATTAAACACTTCCGTTACTTCATAGAAGGTCGTATGTTCACTGTGTTCACAGACCATAAACCTCTTGTAACATCAATCGCCTCAAAAACAGAAAGAAGTCCCCGTCAGGCTCGTCATCTTGATTTCATTTCCCAGTTTACAACTGATATTCGACACATCACTGGCACGAATAATGTAGTGGCAGATGCTCTTTCACGAACTGAGGAAATGGCTATCAATTTTACTGGATTAGATGTTGATAAACTCGTCACACTTCAAGAGATCGATCCAGAACtccaaaatttaattaaaaatccaCAGGTCGTAGGTTCTAAATGGAAGTTAGAACCCATCACAACAAAAATGCACAGAAAACCAATTTGGTGTGAGACCTCTACAAAAATATTTCGTCCATACTTACCCGAGTCCTTAAGAAGATCAACATTCAATTCTTTACATTGCCTTTCCCACCCCGGTATTAGAGCATCCCGGAAGATGCTCTCTAAACGTTATTTCTGGCCTTCAATGAGTGTTGACGTTGGATTTTGGTCTAAGACATGCTTATCATGTCAAAGATGTAAGGTTCAACGACACACTCATTCAGAACACGGTCAGATACCTGTACCGTCGGCCAGATTCGAGCATATTCACGTCGATTTGGTAGGTCCTTTACCTCCATCTCATGAATATCGGTATATCATGACTACAATCGATCGTTTCACTCGGTGGCCCGAAGCAATACCTTTGGTGGATGGAACAGCTGAGACTGTAGCAAAAGCTTTCTTAACCAATCATATTTCAAGATTTGGTGTGCCGTTAAACATAACTTCTGATCGCGGAGCGAATTTCGAATCAAAGTTATTTCAGGAACTTATGAACATCATGGGTTCTCATAAAATAAGGACGACGGCTTACAATCCCAAAGCCAATGGAATCGTAGAAAGATTCCATCGACAGCTCAAATCTTCACTTGAATCTCATGGTAATACTACCAATTGGAGTGATACACTCCCCATCGTCATGCTAGGCATTCGGTCTTCGATCAAATCTGATCTAGGGTGTACTCCTGCGGatcttgtctacggacaaagTCTGAAGATTCCAGGAGAACTATTTATACATCCTGAAGATTCACATCCAATAGAACCAGCAAATCTGGTTGACCATTTACAACAATGGATGCGATCTTTAATTCCTAAAGATACCCGGAAGGATCCTCAGACTAATATTTACGTTCCAAAAGATCTTTTGGAATGCGATTATGTTTTCGTCAGGGTGGATAAGGTACGACCTAGCTTATCACCACCATATGAGGGTCCATTTAAAGTCATCAGACGATTCCGAAAAAGTTTTATCGTTGAAATCAAAGGTAAAAACCAGACGATTTCAATTGACAGACTGAAACCAGCGTACTTGACTGACACAATTCAACGAGAATCACATATCCGAAAAaTTCACATCGATGATGGACATAAATCTGAAAACACAAGACACGGACCGAAAATTTCGATTGATAATTCTATTGGTAGTTTTGCTTCTGCTTCCTCCAGCATAAAACATTTAAGAAAGAAACGCAGTGAAACGTCAACATTAAACTCGGAATGTTTAACCAGCTTTTGGAAAGATAATTCAACAAATAAAAGCAAAAATCAATACGAAAATAGAAATGTCGAGTTGGTTGGTTTACCACATACAATAAAGATTGAAAAGGATGAGGACAGCAAATTAATTCCACCTTCAGAAAGAAAATTTGAGTGTGAGTTTTGTACTAAGACATTTTTGAAGTTAAAACGTTTAAAACGGCATCAAAAACGACATGACAGTGAAAATCCATATGAATGTTCACAGTGTCAGCAAACCTGTGCAACCAAAGAAGATTTAGACattcattttaaaatacatAAAAAGACATATATTTGTGAGACTTGCGGTAAAGTATTTAAGAATTCTTCGAACTTAAGTGATCATAAGTTAATGCATGCCGAGAAACAATTTGAATGTGCATACTGCGGTACAAAATACCGTCGCAAACCTGATTTAATTAACCATATAAGGCATCATCAATCCATCGATCGCAATGAAATTGAAATGGAAATTGAAGCAAACAAAAAATGGGTTTGTGAGTTTTGTGGGAAAAAATTCACGAAGCCTTGGGATCTTAACAAGCACAGAAAAATGCATACTggagaaaaatcatataaatgTTCCCAGTGCAATGCAAAATATGCACGGCGTGACAGTTTGGTTAAACATATGAAACTTCATGAAGAGCATCCCAATGTAGATTTAAATAAAGCCACTATTGATAGTGCTGAAGTGGTTCCAAAGAAAGAATTTTTCGATTTAAGTCGCAAATATAAGTGTGAATATTGTAATAAGAGATTTGTGCGACCTCAACATTTATATCGTCATAAACAATTACATACGGGGGATAAACCATATGAATGTTTATGGTGTGATCGAAAATTTTCACGCAAAGATAGGCTAAAATACCATATAATGACTCATGATGAAAATGCAACTCATATTCCAGATGATGATGCTCCGACTGTACAAAATAAGAGAAAACCGAGAATAATACGTCGCACACGTCAAATGGATTATCGTGAAACATCATCTGATGAAATGGAAGAAGATAATAATGACAAAAGTAAAATCTTATGTGCATGTGATTGGACAGGGTGTGGAAGAAGATTCTTCAATTATGCTGAGTTCGTATCCCATACAGTAACTCATACCAAAGAATATAGATTTCAATGTTCTTTTGGTTCTAACAACGTTCAACGACTTTCTCATTTAATGGGTCATATTGAAACGTCTTCTTCATTCaaaaataaagccattgaaaatgatttaataataactggatcaaaaatcaaaacaattgcAACAAATctaaaagttgaaaatttgatGATGTATTCATGTCAGGAATGTGACTTATGCTTTCCTTCAAGTAAAGAGTTAAAAAGACATCAAAATAATGAACATAATTCGgtTTCAGATTATTCTAGTGATACCACCTGGTCAGATCATTCAGTTAAGCATTATAGAAAGAAATCTAGAACAACACGTCGTACACATCAATTGGATTATTATATATGTGACTGGGCAGGATGTGGTAGAAGTTTCCTAATCTTTCCTGAATTTATTTTCCATACCAAAATTCATACCAAAGAATATAGATTTCAATGTTCCTTTCGTTCTAATAACGTCGAGGAAAATTCTTATTTGATAGGTCATCTTGAGTCGTCCTATACTTTGgaaaatcaaataaatcaaaacagGCCCGTTAACTTTATTAATCGTGAAACgttagaaaatagaaaaactcGATCAAAAATGAAAGTAAACGATAGCAGTTTAAAAATGGAAGATGTCGGAATGAATATTCATTCATGTCAAAAATGTGACTCAAGCTTTTATTCGAGGAAAGAGTTGAGAACACATAAACGATTCTCACATAATCCGaCACGACAAGTGAATTATCGTGATCCATCATCTGATGAAATGGAAACTAAACCAAATTATAATAAACGGAAAACTTTGAATACAAATAAATGTCAAAACTATTGTGTATGTGATTGGGACGGTTGCGGAAGAAAGTTCTTAAATTATTCTGATTTCCTTTCCCATACGACAATTCATataaaagaatataaatttCAATGTTCTGTTGGTTCAAACgacaataaaaatgtttctcATTTTATGGGTCATATTGAAACGTTTTCCTCGTTGGTAAGTGTCGGCTCGTTAAATGTTATTTGTTTATCTGTGCACTATAAAGTTATTTAA
- Protein Sequence
- MATITLPDFIESDPGLWFLLVENLFATKDITDDKQQFGAVLASLKPKVLAIVRPLLINPPTENRYETLKAKIISLLSESEQISIEKLLKTVDIGNQKPSSFYDQLLLIAGDSTAVTPELIKNLWLARLPLGVKTVVVAVQSDDIQKLLPVADRIWEAINGSPSCGNINQSNVEKAKAPSTSTEIWQQPQYPFEKMLEQLTSSFNNMKSRLDNWENNFQRSRSRSPSRYSSFRRNNFRPRSRSPSSKNICWYHRTFGPKAARCTTSRLFVRCFNTNLEFLIDTGADVSVIPCQSFSNLIKDEHNVLTAANGSMIHTFGTKLLNLDLGLRRELRHTFVVASVSKPIIGADFLTKFSLIVDLKRKRLLDTSTQLTVNTISYSYSTPSLRLYNIQGSYGDMLQDFPSLTQEPKYNAPVKHNVVHRIITKGQLPFSRPRRLEATKFKIAKDEFSHMAQLGLIKPSSSCASSPLHLVPKKDQNDWRPCGDYRRLNDVTIPDRYPIPHIQDFSMHLHGCTVFSKIDLVRAYHQIPVAAEDIHKTAITVPFGLFEFLRMPYGLRNAAQTFQRFMDEVLKGLDFVFAYIDDVLVASNSPQEHQNHLRILFKRLSDFDIKIKISKCVFGVPSLDFLSHEITKDGIKPSPDRIMAIQDFPQPISVRQVQRFVGMVNYYHRFIPHLAELIAPLHGYLAELAKIKKKSAFVWPLQCSTAIDNVKLALVNCTLLAHPLQNASFCIKTDASGTATGAVLEQLNKGSWQPLGFFSRKLSPAEKNYSTFDRELLAIFLAIKHFRYFIEGRMFTVFTDHKPLVTSIASKTERSPRQARHLDFISQFTTDIRHITGTNNVVADALSRTEEMAINFTGLDVDKLVTLQEIDPELQNLIKNPQVVGSKWKLEPITTKMHRKPIWCETSTKIFRPYLPESLRRSTFNSLHCLSHPGIRASRKMLSKRYFWPSMSVDVGFWSKTCLSCQRCKVQRHTHSEHGQIPVPSARFEHIHVDLVGPLPPSHEYRYIMTTIDRFTRWPEAIPLVDGTAETVAKAFLTNHISRFGVPLNITSDRGANFESKLFQELMNIMGSHKIRTTAYNPKANGIVERFHRQLKSSLESHGNTTNWSDTLPIVMLGIRSSIKSDLGCTPADLVYGQSLKIPGELFIHPEDSHPIEPANLVDHLQQWMRSLIPKDTRKDPQTNIYVPKDLLECDYVFVRVDKVRPSLSPPYEGPFKVIRRFRKSFIVEIKGKNQTISIDRLKPAYLTDTIQRESHIRKIHIDDGHKSENTRHGPKISIDNSIGSFASASSSIKHLRKKRSETSTLNSECLTSFWKDNSTNKSKNQYENRNVELVGLPHTIKIEKDEDSKLIPPSERKFECEFCTKTFLKLKRLKRHQKRHDSENPYECSQCQQTCATKEDLDIHFKIHKKTYICETCGKVFKNSSNLSDHKLMHAEKQFECAYCGTKYRRKPDLINHIRHHQSIDRNEIEMEIEANKKWVCEFCGKKFTKPWDLNKHRKMHTGEKSYKCSQCNAKYARRDSLVKHMKLHEEHPNVDLNKATIDSAEVVPKKEFFDLSRKYKCEYCNKRFVRPQHLYRHKQLHTGDKPYECLWCDRKFSRKDRLKYHIMTHDENATHIPDDDAPTVQNKRKPRIIRRTRQMDYRETSSDEMEEDNNDKSKILCACDWTGCGRRFFNYAEFVSHTVTHTKEYRFQCSFGSNNVQRLSHLMGHIETSSSFKNKAIENDLIITGSKIKTIATNLKVENLMMYSCQECDLCFPSSKELKRHQNNEHNSVSDYSSDTTWSDHSVKHYRKKSRTTRRTHQLDYYICDWAGCGRSFLIFPEFIFHTKIHTKEYRFQCSFRSNNVEENSYLIGHLESSYTLENQINQNRPVNFINRETLENRKTRSKMKVNDSSLKMEDVGMNIHSCQKCDSSFYSRKELRTHKRFSHNPTRQVNYRDPSSDEMETKPNYNKRKTLNTNKCQNYCVCDWDGCGRKFLNYSDFLSHTTIHIKEYKFQCSVGSNDNKNVSHFMGHIETFSSLVSVGSLNVICLSVHYKVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -