Dgla050578.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- ZFY_2
- Assembly
- GCA_963693315.1
- Location
- OY856187.1:134708013-134719381[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0024 0.48 13.4 0.7 2 23 69 90 68 90 0.98 2 11 6.9e-05 0.014 18.2 2.9 1 23 96 119 96 119 0.95 3 11 5e-05 0.01 18.6 1.0 1 23 125 147 125 147 0.98 4 11 1.4e-05 0.0029 20.4 0.2 1 23 153 175 153 175 0.98 5 11 0.0001 0.021 17.7 0.5 1 23 181 203 181 203 0.97 6 11 9.7e-07 0.0002 24.0 0.6 1 23 209 232 209 232 0.94 7 11 0.00047 0.095 15.6 2.1 2 23 239 258 238 258 0.97 8 11 1.9e-05 0.0039 20.0 0.2 3 23 266 286 265 286 0.98 9 11 1.1e-05 0.0022 20.8 0.8 1 23 292 314 292 314 0.99 10 11 0.14 29 7.8 2.1 7 23 329 346 320 346 0.85 11 11 0.35 71 6.6 1.5 1 20 352 371 352 373 0.89
Sequence Information
- Coding Sequence
- ATGAAAGTTAATATAACCAaaaatgataagaataataatgatactaaaaaatttaaatcagaaataaaaaaacagcttaaagaagaatttaaaagaaaattgaaagaagaaaaaaccaaattaaaagaaaaacaaaaatctgaaaagaaaatcgaaaaacaaaaattaaaagaagaaaaacgAAAGCGAAAACGAGAACAAAATAAATGTGTGATATGCCTAAAAACgtttcaaatattaaatgatttgcGTAAACATTTACGAGTTCATAGTGGAGAACGTCCATTCGCCTGTGTTCACTGTGATAAGAAATTTCGGCAAGCTGGATGTTTAAAAAATCACATAGCATCACAACATGGAAGTGATGcacaatttatttgtaatttttgtaacaaaacatttccaatcAAAGAAAGACTTCGTTTGCATATGAGAATACATACAGGCGAGAAACCTTATGAATGTGCTTATTGTTCAAAAACATTCGCTCGTGGTGGACAATTAACACAACATTTGGCAACGCATAATGGTTTTAAAAAACATCGATGTGAGCACTGCCCCGCGGCTTTTGCATTTGCAGCAAATTTACGAGTACATTTGAAAGGACATCTCAACGAACGTGATTACACGTGTCATTTATGTGGAAAGGGATTTGTTCGTCCGGATGCattgaaaaaacatttagaaGGATTTCACGATAACATTAAAGGAGTGCGTTGTGATATTTGCAATAAAAGATTCAAAGGTCATCTTGAACAACATATGCGAATACATCAAAATGTAAGACCACATGGCTGTGCAACCTGTGGTTCAGCTTTCTCACAACGCTCACAGTTAATTGTGCATCAACGTACACATTCAGGCGAAAGGCCTTACAGATGTGAAATTTGTTGGCAGGCTTTTGCTCATTCAAGTGTTTTAAAATTGCATATACGGAAACATACTGGCGAAAAACCATTCGCATGCCCTTTGTGTATCGTCCAAGGAGTTGCATTTTCACAATTAccacatttaaaaaaacatatgcAATCAATACATGGATTAGACAAATCGTACATGTGTCATATTTgttcgaatttttttaaaacaaaaatagaacaTCAAGCTCACCAAGTTAGTTGTGTGAAAACAGAAAATGCAAATCACATAACAACAAATAGTCTAGCTAACACCCTCGTTGAAATGATTGAGCATGAAGATGATAATGATATTCAATCGAGTAGTAAaaagatAAAAGTAGAAGATATCATAAAATCAGAATATGAAACTCCAATGTCTGAAACAAAAATGCGGTTTCTTGTAGCAATACTACTAAAACGTATTTCAACAGAGGCACGATTAAAACAATTGGGTTATGAAAAACGTCTTATTGATCATGTACTAGTTGATTCCTTAAAATTAGCTGATCGTAAATATTGTGAGGATACTAAACTAACAGCTGCTGAACGGTTGAAGGTGAATATAAACGAATTACTTGATTGGCTGGTACCATCAGAATATATGTTAAAATTTCGAGCTGAGCGACGAAGTACAGAAGAACTGCTTGAGCAATTAACAAAAACCTCTTGA
- Protein Sequence
- MKVNITKNDKNNNDTKKFKSEIKKQLKEEFKRKLKEEKTKLKEKQKSEKKIEKQKLKEEKRKRKREQNKCVICLKTFQILNDLRKHLRVHSGERPFACVHCDKKFRQAGCLKNHIASQHGSDAQFICNFCNKTFPIKERLRLHMRIHTGEKPYECAYCSKTFARGGQLTQHLATHNGFKKHRCEHCPAAFAFAANLRVHLKGHLNERDYTCHLCGKGFVRPDALKKHLEGFHDNIKGVRCDICNKRFKGHLEQHMRIHQNVRPHGCATCGSAFSQRSQLIVHQRTHSGERPYRCEICWQAFAHSSVLKLHIRKHTGEKPFACPLCIVQGVAFSQLPHLKKHMQSIHGLDKSYMCHICSNFFKTKIEHQAHQVSCVKTENANHITTNSLANTLVEMIEHEDDNDIQSSSKKIKVEDIIKSEYETPMSETKMRFLVAILLKRISTEARLKQLGYEKRLIDHVLVDSLKLADRKYCEDTKLTAAERLKVNINELLDWLVPSEYMLKFRAERRSTEELLEQLTKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -