Basic Information

Insect: Diogma glabrata
Gene Symbol: ZEB2_1
Assembly: GCA_963693315.1
Location: OY856187.1:50393098-50396478[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0046 0.94 12.5 0.2 2 23 212 233 211 233 0.97

2 17 7.9 1.6e+03 2.3 2.0 1 23 263 285 263 285 0.92

3 17 0.00039 0.08 15.8 0.5 3 23 319 340 318 340 0.97

4 17 0.00026 0.053 16.4 4.4 1 23 352 374 352 374 0.98

5 17 0.0012 0.25 14.3 1.5 1 23 380 402 380 402 0.98

6 17 2.3e-06 0.00046 22.9 1.0 1 23 408 430 408 430 0.99

7 17 0.0032 0.65 13.0 0.6 2 23 471 492 470 492 0.95

8 17 0.0041 0.84 12.6 0.8 2 23 628 649 627 649 0.96

9 17 2 4e+02 4.2 4.8 1 23 655 678 655 678 0.93

10 17 3.5 7.2e+02 3.4 0.1 1 10 703 712 703 725 0.90

11 17 0.012 2.4 11.2 0.3 1 23 731 754 731 754 0.97

12 17 0.00026 0.053 16.4 3.8 1 23 880 902 880 902 0.98

13 17 0.0055 1.1 12.2 2.9 1 23 908 930 908 930 0.95

14 17 3.2e-06 0.00065 22.4 0.8 1 23 936 958 936 958 0.98

15 17 6.2e-05 0.013 18.4 0.9 1 23 970 992 970 992 0.97

16 17 0.00017 0.034 17.0 2.0 1 23 998 1020 998 1020 0.98

17 17 7.3e-05 0.015 18.1 1.7 1 23 1026 1048 1026 1048 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0046	0.94	12.5	0.2	2	23	212	233	211	233	0.97
2	17	7.9	1.6e+03	2.3	2.0	1	23	263	285	263	285	0.92
3	17	0.00039	0.08	15.8	0.5	3	23	319	340	318	340	0.97
4	17	0.00026	0.053	16.4	4.4	1	23	352	374	352	374	0.98
5	17	0.0012	0.25	14.3	1.5	1	23	380	402	380	402	0.98
6	17	2.3e-06	0.00046	22.9	1.0	1	23	408	430	408	430	0.99
7	17	0.0032	0.65	13.0	0.6	2	23	471	492	470	492	0.95
8	17	0.0041	0.84	12.6	0.8	2	23	628	649	627	649	0.96
9	17	2	4e+02	4.2	4.8	1	23	655	678	655	678	0.93
10	17	3.5	7.2e+02	3.4	0.1	1	10	703	712	703	725	0.90
11	17	0.012	2.4	11.2	0.3	1	23	731	754	731	754	0.97
12	17	0.00026	0.053	16.4	3.8	1	23	880	902	880	902	0.98
13	17	0.0055	1.1	12.2	2.9	1	23	908	930	908	930	0.95
14	17	3.2e-06	0.00065	22.4	0.8	1	23	936	958	936	958	0.98
15	17	6.2e-05	0.013	18.4	0.9	1	23	970	992	970	992	0.97
16	17	0.00017	0.034	17.0	2.0	1	23	998	1020	998	1020	0.98
17	17	7.3e-05	0.015	18.1	1.7	1	23	1026	1048	1026	1048	0.97

Sequence Information

Coding Sequence: ATGAATCGCTATAATATGACGATAAAGCAGGAAAATGAATACGAAATAACTGAAAGCggtataataaatattgaaaataataacattCATGTTATTGGAAATTCATCTGGTATTATTGATCAACATCAGATTCATTTACAACAACAGCATCACCATCATCAAATGATGTTACAACATCAACAATTATTAATACAACAAGGaggacaacaacaacaacaccaAATTCGGCATCTTCATGCTACCCCTTCACCGAATCATATTATACAACACAACAATATCCATAAACACAATGGTGAATCAAATGGAACTAATACGATACATTATGTAAATAGTAATCACTCAAGTTCACATCATTCTCTACAACACCATATCGTCCATAATCAAATGCTAGTACATCAATCAAGTAGGCCGTCGTCAACCCATGAGCAACACTCTCCAAATACAACTGTGGTTATTGACCCATCAACTACTGTAGTTATTGTTCCATCAACCACAACTGTAGTAACATTAATAGAATGTCCAACTGAGAATGATACGTCTCTGGCAGAGGAGCCACAAGAACCTCCACAACAACTGGACGATTTGCCTACTCTTGttccaataaaaaaacaagataatattaatataaatatcgTATGTAAGATttgtaaagaaaattttgttggTGTAGTCACATTCACAGAACACATGAAAACACATTTACCAAAAGAAGAAATTGAAGAAGTTGGAACAACAAAAATAGAAATGGTTGATTTGTCGGCAACGTTACATACAGAGAAAAATTTCTTTCCTTGTGCATTTTGTAATAAGAAATATATTTGGCACAAATTTTTAGTGGCACATTCAAAGTCCCATAAAATACCGGCAGAATTTGTGTGTTCGGTTTGTGGTGGAACTTTTGAAGGGATTTACTATGAGCATATGAGAACTCATATCGTAAACGAAGATAAAGCGTGCTCTAAATGTGATGTAAATTTTAGTACACTAAAGGCACTTAAGGAACATGTTCGTACAAGTCATAATCCACAAATCCATGGAGATGCGACGCATCAGCATAAATGTGAAATTTGCGGAAAGCATTACAAAGCGTTTTCATATTTGAGGGAACATCAACGGATACATACAGGAGAAAAACCGTATACTTGTGACATTTGTGGAAAAGGTTTTGCAAAATATGGTTGCTGGTCCGAGCACAAGAAAACTCATTCAATTATTAAAGCATATAAATGTCCATTGTGCCCAAAAGCATTTACAAAACGACGTTATTTAAAAGCGCATCTGTTACGACATCCTCAAACCGTTGATTTAGataaagtttttattgaaaCACAAGATGGTGAGATATCAGCAAGAACATTTCTTTTTCCTCCAGTTAAAGAAAAACCAGCGTTTAAAGTTCAACCGAAGTTAAATTGTCCGATTTGTTTtaaggaatttaaaaaaatgagaTATCTTCGTGCACATGTTGTACGACATCCGGCCAATTTTGTACGACAAAAGTTAGGAATACCAGCAGATATGCCACTACCATGTCTGCTCACATCAGGGCAATACACACAAGATTATTATTCGCcagaaaaaaatgatttacaGTCATTGCAGAAACATTCATTGAAAGCGGAGATTTTAGATGATGAATTGTCGAGTGAGGATGATCTGGATGAAAATCATACAAAACCGAAAGAAATGAATACAAATCATTTTGTGGATGActttgataattttaataatgaTGGGTTTCACGATGATGACGATGAAGATGATTTTTTCTTAAAACCGTCAACGTCGAATATTCCAAATAAAGATGTAGAGATAACACCAGTACAGGGACCAGTCACGTTAGATATTGAACCAATAACAGACGAAAAACCAGAACTGTTAGTTTGTACTACTTGTAAGAAAAGTTTTCAAGAAAGCAGATTACTAAAGGATCACGAACAGGTGCATGATGGAGAAAATCCTTATAAATGCAAACATTGTAGTTCCTCGTTTGTGTTATTACATCGATACGAAGAGCACATGAGTTTTGAACACGGCGATGATAATCTTTTCAACAACGAAAGAGATCGTCATTTAAATCTATATTTTGCTACAGAGGAAAAATCGTTTACATGTCGATTGTGCGGGGAAACATTTttaacagaaaatattttagacGAACATGAAGAAATTCACGTAGGCGAAGAACCATTTAAGTGTACTGAATGCGATGAAATTTATGCAATACAGTCAAAATATCTTACACATTTAGAAAAAGAACATAATATTGTGGATAAGAAATTCAGTTTAGAAACGAATGAAACAGACGAAGAAAAACATGAGGAGCTAGATGATTCGGATGTAAATTATGAACTAGATGAATCAGGTGAAGAAGAAGAAATATCAGAACCTGAACCACCGGATGAAATCGATCAACTTGAAGAAACGAAATCTCCTGTATTACGACGTAGTGGTAGATTAGGTACAGCAAACATAGCCAAAGTAATACCAATATCTATTAAGAGAAGAATCAGGAAAAAAAATCAtgagaaaaatacaaaattggaaaaaacctCTAATGACATTGAAATCGATCCAATCAGTGATGGGCAACAAACAAAAGCTAAAACAACCCCAACGACggaagagaaaaaaaaacataaatgtaaattatGTGGAAAGTTTTACACCACGTTATTCTATTTACGGGAGCATCTACAAATTCATTCTGGTAATCGTCCacataaatgtaaaatttgtggTAAAACGTTTGCCGCAATGTCATGTTATCGTGAGCACGTCGAATTGCATACAAATTCAAAGAATCATAAATGTAAAGTTTGTGGTATGGCGTTTGCCGTTCCACGGTATTTAAAAGCACATATGCGACGCCATATTCAGAAATCCGAACCGAATGGTggtaaaaaatttgattgtccacaatgcaataaaaaatatcaatcgAAGACATCTTTGGCGGAACATATGAAAATACATACGGGAGAGGCTccatttacgtgtaactactGTGGTAAAGTTTTTATGTTAACTACATCTTTTCGTGATCATATGCTTAAACATGAAAATGTTGAAATGCATCAGTGTCCATTTTGTCCGAAAAGCTTTGTAAAAGCTCGTTATTTACAACAACATCTTGTGCGtcatattcaaaaaattgataatgaaTCGAGTGAAGAAGGAAAAACTGATACGGTGGCTAACAATAAAGATGAAAAAATGTCAGAAATTCCAGTACAAGAAATAGAAACAGATCAACAAATAAGCTACGAACAACAAACAATTCATCTCAGTAGTGGGGCCATAATAAATTATATCCCATCAGCTGATGGGCAATCACTTATTCAATCAAATGAAATATTAGTCGaagaattaataatttaa
Protein Sequence: MNRYNMTIKQENEYEITESGIINIENNNIHVIGNSSGIIDQHQIHLQQQHHHHQMMLQHQQLLIQQGGQQQQHQIRHLHATPSPNHIIQHNNIHKHNGESNGTNTIHYVNSNHSSSHHSLQHHIVHNQMLVHQSSRPSSTHEQHSPNTTVVIDPSTTVVIVPSTTTVVTLIECPTENDTSLAEEPQEPPQQLDDLPTLVPIKKQDNININIVCKICKENFVGVVTFTEHMKTHLPKEEIEEVGTTKIEMVDLSATLHTEKNFFPCAFCNKKYIWHKFLVAHSKSHKIPAEFVCSVCGGTFEGIYYEHMRTHIVNEDKACSKCDVNFSTLKALKEHVRTSHNPQIHGDATHQHKCEICGKHYKAFSYLREHQRIHTGEKPYTCDICGKGFAKYGCWSEHKKTHSIIKAYKCPLCPKAFTKRRYLKAHLLRHPQTVDLDKVFIETQDGEISARTFLFPPVKEKPAFKVQPKLNCPICFKEFKKMRYLRAHVVRHPANFVRQKLGIPADMPLPCLLTSGQYTQDYYSPEKNDLQSLQKHSLKAEILDDELSSEDDLDENHTKPKEMNTNHFVDDFDNFNNDGFHDDDDEDDFFLKPSTSNIPNKDVEITPVQGPVTLDIEPITDEKPELLVCTTCKKSFQESRLLKDHEQVHDGENPYKCKHCSSSFVLLHRYEEHMSFEHGDDNLFNNERDRHLNLYFATEEKSFTCRLCGETFLTENILDEHEEIHVGEEPFKCTECDEIYAIQSKYLTHLEKEHNIVDKKFSLETNETDEEKHEELDDSDVNYELDESGEEEEISEPEPPDEIDQLEETKSPVLRRSGRLGTANIAKVIPISIKRRIRKKNHEKNTKLEKTSNDIEIDPISDGQQTKAKTTPTTEEKKKHKCKLCGKFYTTLFYLREHLQIHSGNRPHKCKICGKTFAAMSCYREHVELHTNSKNHKCKVCGMAFAVPRYLKAHMRRHIQKSEPNGGKKFDCPQCNKKYQSKTSLAEHMKIHTGEAPFTCNYCGKVFMLTTSFRDHMLKHENVEMHQCPFCPKSFVKARYLQQHLVRHIQKIDNESSEEGKTDTVANNKDEKMSEIPVQEIETDQQISYEQQTIHLSSGAIINYIPSADGQSLIQSNEILVEELII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -