Basic Information

Insect: Diogma glabrata
Gene Symbol: -
Assembly: GCA_963693315.1
Location: OY856188.1:193910935-193915275[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00016 0.033 17.1 0.7 1 23 155 177 155 177 0.95

2 15 0.0021 0.42 13.6 2.2 1 23 183 205 183 205 0.97

3 15 5.2e-05 0.011 18.6 0.2 1 23 302 324 302 324 0.98

4 15 0.00024 0.05 16.5 0.5 1 23 330 352 330 353 0.96

5 15 0.00039 0.079 15.9 3.4 1 23 384 406 384 406 0.97

6 15 0.099 20 8.3 0.3 1 23 419 441 419 441 0.94

7 15 0.37 76 6.5 0.0 2 23 448 470 447 470 0.92

8 15 0.24 50 7.1 1.9 1 19 477 495 477 496 0.95

9 15 0.00054 0.11 15.4 5.8 1 23 505 527 505 527 0.96

10 15 0.25 51 7.0 0.3 2 23 533 554 532 554 0.96

11 15 1.8e-05 0.0036 20.1 0.4 1 23 562 584 562 584 0.98

12 15 0.0017 0.35 13.8 0.1 3 23 592 612 590 612 0.97

13 15 4.1e-05 0.0083 18.9 0.5 1 23 618 640 618 641 0.96

14 15 0.11 22 8.2 0.4 1 23 655 677 655 677 0.97

15 15 0.0041 0.83 12.6 0.0 1 20 1059 1078 1059 1081 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00016	0.033	17.1	0.7	1	23	155	177	155	177	0.95
2	15	0.0021	0.42	13.6	2.2	1	23	183	205	183	205	0.97
3	15	5.2e-05	0.011	18.6	0.2	1	23	302	324	302	324	0.98
4	15	0.00024	0.05	16.5	0.5	1	23	330	352	330	353	0.96
5	15	0.00039	0.079	15.9	3.4	1	23	384	406	384	406	0.97
6	15	0.099	20	8.3	0.3	1	23	419	441	419	441	0.94
7	15	0.37	76	6.5	0.0	2	23	448	470	447	470	0.92
8	15	0.24	50	7.1	1.9	1	19	477	495	477	496	0.95
9	15	0.00054	0.11	15.4	5.8	1	23	505	527	505	527	0.96
10	15	0.25	51	7.0	0.3	2	23	533	554	532	554	0.96
11	15	1.8e-05	0.0036	20.1	0.4	1	23	562	584	562	584	0.98
12	15	0.0017	0.35	13.8	0.1	3	23	592	612	590	612	0.97
13	15	4.1e-05	0.0083	18.9	0.5	1	23	618	640	618	641	0.96
14	15	0.11	22	8.2	0.4	1	23	655	677	655	677	0.97
15	15	0.0041	0.83	12.6	0.0	1	20	1059	1078	1059	1081	0.93

Sequence Information

Coding Sequence: ATGGAAGAGGGAAGCATAAGAATCGATTGGAATCGTGGTGAAGTAGTCCAACAAGATCTGATAACAGAAGAAGTtgtagaaataaataataccGATGATGATGAAGAAGAGGAATATTTGGTTGGAGAAGAAATCATACCATCGAACGATGTGACAAATAGTTTAGATCATATAGCGGCagagaatttaatttacatGGCACATGATGGACATATGCAGAGTATGGGTGATTTAATTGAAGAACAAGTTGAACAAGTAGAAAATGCAAATTATAATGAAGAGTTATATTACGAATGTCAAGTAACAGAAGAAGTTATAACTGATGATTGGGTTCAACCAGAAGGTGAGGAGAGGGTTGAAATTCCAGCAGATCAGTTATGTGCAAATAGTGATATACCGATTGAGGAGGATATGGATGTACCATTACCAACTGATCAAGATGAATATACAACATCAAGACCATATCCATGTGATTTTTGCAGTCGTAGGTTTAGAAAAAAAGCAAGTCTTATGAACCATATGGTCGCGCATCAAAACGATAGACCACATGTATGTAATTTATGTGGAGCAAGATACATTAGAAGATGTGATTTATTAAATCATCTTAAAATCCATGCATATATTCCTGAAGATGGAGATCTAGACGAGTTAGAAGAAACTCATAACTTTCAAAAAGAATCAATAAAATCGAAACGTCGATATGAGACtataaattcaaaaagaaaaaatgtatcTGGATTAAAAAGTTCTAATAAGAAGCAAAAGCTCGAAGCAGCGGTTGATATTGTAAAATATGattatgatgatgatgatgatgatgatgttaTTAGCGATAATCAAAATAGTAGTTTCGAAATACAAGATGTTTATGAACGTTTTCCGGTTGTCGATCCAAAGAAACCATTTGTTTGTCAACATTGTGGTGTTGGATTTGCTCGACAAAAAGCTTTAGCATCACATGCACGGGTTCATGGTGGTGATTCTCCATTTGAATGTGAAACATGTGGAGAAATGTTTTGGGATCCAACAACATTAAAGGATCATCAAAGAATTCATCATCAAGGACAAGGAGCAGAATCAGAATACGAACCAGAAAATGATAgTGACGATTCCGATTTTCAAGAAGAGGTTCATTCAAAATATGGAGAATTTTACTGTGACATTTGTGGTATGTCTTTTCATCGCTTTGAATTATTAAAACGACATTCGCGACAACACATAAAAATCGATTCTTCAATCGATGACAATAATGTTCATTGTTGCAATGTTTGTGGGGAAAATTTCCAAGAAGCGTTAGATCTCTTAGCACATGCAGAAGTTCATGCTCGGTTTCAACCACtcaaatGTATGCTGTGTGGTGAATCATTTGTCGAAGAATTAGCAATAAAAGAGCATCTGAATATTGTACATTCAAATGAACTTACGCAACATTCATGCCGGCTGTGTGGTAAAATGTGTCGAGACGGGCGAACTCTTATGAAACACTCTTGGGATCATTCCAGAGAAAAAAATCATTCCTGTTCAAAATGTggcaaaaattttcataataaagCAAGATTGAAACGTCATATGGTATCCCATCGTAATAAATCCGTCAGCTGTGATGTTTGTGGTGATGAATTTCCTGATGGACGTTCATTAATGAATCATAGACATTCTCACTCCAATGTTACGGGTAGACAATTTCCATGTCGAGAATGTGGTAAAACATTTGGTTCTCGAAGTTCACAACAAATTCATATTCGAATACACACGGGTGAACGTCCGTACGGATGTCGATATTGTTGGAAAGCGTTCGCAGATGGAGGAACTCTACGAAAACATGAAAGGATACATACAGGTGAAAAACCATATGTTTGTTCTGTTTGTCCTAGAGCATTTAATCAAAGAGTTGTGTTACGGGAACATATTCGTTCGCATCATTCTAGTCCTGATACAAAAAGAGGTAACTCAGAGACACCATATTATTGTCAAGTTTGTCATGATTTATTTGCTTCATCTGTGGAACTGATACAACATTTAATACAACACAGTGATCTAAACACTGCTATGAAACGCCAGCCGATGACTGGACcaagaaaatataaaagaagACGAAAATTAAAACCGCATGAACTAGAACGTTTAAGAGCTCAGAAAAGCAAATCCGGTGATATATATTATACGGATGAGGATGAACCTGAATATGCCCAAGAAGAAGAGGATGATGATGTTGATTATCAAGAGGATTTAAATTATAGTAAATCGTCGCGTGCTCGTAACACAATAAATCAAAATCCTCGTTCGATACGACCGACATCAACAGTTCCGtttgttgaaaaaaaacaatcaatttcTAAAAAGAAAAGTAATTTAGAATTTGATTTACTGATAAAAAGTTTAGCAACTCCACTCGATCAACTACAATCAAATAGTGttaataataacattaaaacaaacaaatcaatcacaaaaaagaaaaaaatagattCTGGTAATCAACCAGCCCGACCCAAAATGATACATACTCAAAAAACACGAGTTGCCATTGAAGATGGTAAAcggaaaacaaaaactttaataacaCGAACAACATCATCAACGAATGAAAATAGCAAGCAAAATGAAAGAAATCGACCGCGTaccaaaaatgtaaattatcatattttaatGCCAGATAAATTACCAAACGCAACCTTCCCAACCGATGTCGGTTTAACggaacttttaaatataaaacaagaaCAGAGTTTTATATCGAAATATGAAAAATCTACTTCGGAATCCGATGGTGGACACTATTCATTCGATTTGCCTCGTGATAGTTTAGTTAGTAAATATAATAGTGATATTGTAAATGATTTAGAAGAAATTTTACGGTCACCTATTAAAGGTAATCAAACATCAAGTAATGAACTTATTCTAGGTATATCGGAGAATGAAAATCTTCAAAATAGTTCATATAGTATTAGTACAAGACCAAAACGTAATGTTCGCCAAAAGTTTTCGTTCAAAATTGCATCACCGCCAAGTCCAAGTAGAAGTGATAGAAAaacgaatattaaatatttaaacaataataataataaatcaagtAAATCAAATAATAGCATCAAGACTATTATTAAAGAAGAAATAGATTATGAAAGTGTTCCAATAAAACAGGAAGCCGAGGAAAAAGtaaatgtgcaaatatttaGATGTGAAATGTGTTCGGCTGTTTTTAGCGATCGTGCTCAATTATTGGTTCACGTTCCCATACatatatga
Protein Sequence: MEEGSIRIDWNRGEVVQQDLITEEVVEINNTDDDEEEEYLVGEEIIPSNDVTNSLDHIAAENLIYMAHDGHMQSMGDLIEEQVEQVENANYNEELYYECQVTEEVITDDWVQPEGEERVEIPADQLCANSDIPIEEDMDVPLPTDQDEYTTSRPYPCDFCSRRFRKKASLMNHMVAHQNDRPHVCNLCGARYIRRCDLLNHLKIHAYIPEDGDLDELEETHNFQKESIKSKRRYETINSKRKNVSGLKSSNKKQKLEAAVDIVKYDYDDDDDDDVISDNQNSSFEIQDVYERFPVVDPKKPFVCQHCGVGFARQKALASHARVHGGDSPFECETCGEMFWDPTTLKDHQRIHHQGQGAESEYEPENDSDDSDFQEEVHSKYGEFYCDICGMSFHRFELLKRHSRQHIKIDSSIDDNNVHCCNVCGENFQEALDLLAHAEVHARFQPLKCMLCGESFVEELAIKEHLNIVHSNELTQHSCRLCGKMCRDGRTLMKHSWDHSREKNHSCSKCGKNFHNKARLKRHMVSHRNKSVSCDVCGDEFPDGRSLMNHRHSHSNVTGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYVCSVCPRAFNQRVVLREHIRSHHSSPDTKRGNSETPYYCQVCHDLFASSVELIQHLIQHSDLNTAMKRQPMTGPRKYKRRRKLKPHELERLRAQKSKSGDIYYTDEDEPEYAQEEEDDDVDYQEDLNYSKSSRARNTINQNPRSIRPTSTVPFVEKKQSISKKKSNLEFDLLIKSLATPLDQLQSNSVNNNIKTNKSITKKKKIDSGNQPARPKMIHTQKTRVAIEDGKRKTKTLITRTTSSTNENSKQNERNRPRTKNVNYHILMPDKLPNATFPTDVGLTELLNIKQEQSFISKYEKSTSESDGGHYSFDLPRDSLVSKYNSDIVNDLEEILRSPIKGNQTSSNELILGISENENLQNSSYSISTRPKRNVRQKFSFKIASPPSPSRSDRKTNIKYLNNNNNKSSKSNNSIKTIIKEEIDYESVPIKQEAEEKVNVQIFRCEMCSAVFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -