Basic Information

Insect: Diogma glabrata
Gene Symbol: ZFX_1
Assembly: GCA_963693315.1
Location: OY856187.1:182092576-182108802[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.8 9.7e+02 3.0 0.1 1 19 173 191 173 193 0.83

2 15 0.0068 1.4 11.9 0.5 3 23 205 226 203 226 0.93

3 15 0.00012 0.025 17.4 1.9 1 23 232 254 232 254 0.97

4 15 3.8e-05 0.0078 19.0 1.1 1 23 260 283 260 283 0.97

5 15 0.18 36 7.5 3.4 1 23 288 310 288 310 0.97

6 15 0.0053 1.1 12.3 8.9 1 23 316 338 316 338 0.99

7 15 2.9e-05 0.0058 19.4 2.7 1 23 344 366 344 366 0.96

8 15 1.4e-05 0.0028 20.4 0.4 1 23 372 394 372 394 0.98

9 15 1.7e-08 3.5e-06 29.5 1.8 1 23 400 422 400 422 0.99

10 15 0.00017 0.035 17.0 2.3 1 23 428 451 428 451 0.92

11 15 1.4e-05 0.0029 20.4 0.5 1 23 508 530 508 530 0.98

12 15 1.7e-05 0.0034 20.1 1.4 1 23 536 559 536 559 0.95

13 15 0.0023 0.47 13.4 1.6 1 23 565 587 565 587 0.98

14 15 0.00012 0.024 17.5 2.3 1 23 593 615 593 615 0.98

15 15 2.1 4.2e+02 4.1 0.6 1 17 621 637 621 638 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.8	9.7e+02	3.0	0.1	1	19	173	191	173	193	0.83
2	15	0.0068	1.4	11.9	0.5	3	23	205	226	203	226	0.93
3	15	0.00012	0.025	17.4	1.9	1	23	232	254	232	254	0.97
4	15	3.8e-05	0.0078	19.0	1.1	1	23	260	283	260	283	0.97
5	15	0.18	36	7.5	3.4	1	23	288	310	288	310	0.97
6	15	0.0053	1.1	12.3	8.9	1	23	316	338	316	338	0.99
7	15	2.9e-05	0.0058	19.4	2.7	1	23	344	366	344	366	0.96
8	15	1.4e-05	0.0028	20.4	0.4	1	23	372	394	372	394	0.98
9	15	1.7e-08	3.5e-06	29.5	1.8	1	23	400	422	400	422	0.99
10	15	0.00017	0.035	17.0	2.3	1	23	428	451	428	451	0.92
11	15	1.4e-05	0.0029	20.4	0.5	1	23	508	530	508	530	0.98
12	15	1.7e-05	0.0034	20.1	1.4	1	23	536	559	536	559	0.95
13	15	0.0023	0.47	13.4	1.6	1	23	565	587	565	587	0.98
14	15	0.00012	0.024	17.5	2.3	1	23	593	615	593	615	0.98
15	15	2.1	4.2e+02	4.1	0.6	1	17	621	637	621	638	0.87

Sequence Information

Coding Sequence: ATGTCGGATCATGAGATAAatgaatacaatttaaatcaaacatgTAGAACATGTTTGAGAAATGAAGTGgataataaaaaacttaaattaatttttagcgaaaattcatttgaaatttctgatgaattaattttaatgaaactaaaAATAGAAGAGAATGATGGGCTTccacaaaatatttgtaatcaGTGTCTAGAAATATTGGCCTATATAATATCATTTcgaaatatttgtaaaaaatctgaaaaaatacttttactatattacaaaaatatagaATTTATAGACGATGAAGAAgtaaacaaatcaaatattgaatttttaaatgtagAGTTAATAGATAGATCATGTGTTTCGATAGAACAATATGATTGTAAAAGTATGGCAAGTGAGGATAATCTAGAATGGAACTCTGATTGTCCGGATggtaaattaaatattgtagTTGAAGAATATGAATCTACCACAGATCGAAAAATGagtaatattcatcaaaatattcaagTCAAACATCTCTTTTCATGTTCCAAATGTGGCCTTGAAAATAAGGATTTAGAAGACTTAGGCAAACATGAAATCGAAGAATCATGTATATTATTATCCAATCAAATATGCAGTTTTTGTAAACAAGAATTTGAAAATCAAGAACTGTTAGAAAATCATTTATCAGAAAAACATCCAAAAGACCGTCCACATTATTGTGCAATCTGTGGCAAATCGTTCAAAAGTGTATCGAACCGGAATTCTCATGTTCAGTCTCATAATGAAGATAATTCTTACAGTTGTGATATTTGTGATCAAGGTTTTAAAAGCAAAGTGTACTTAAGTAAACACAAAAAATCTGTTCACACAATTTCGCATCATGTGTGCAATCATTGCTTAATTGAATTCGACAATACGGCGAAATTTGAATATCATTTAAAATCGCAcgaaatgaataaaaaatataaatgtaaattttgtGATAAATCGTTTTTACAACATCATCATCTTGCCAATCATGAACGTACTCATACAGGTTTGCGTCCATATTTATGTAATATATGTGGAAAAGATTTCAAGCAAGAATGTAATTTTAAGTTGCATCTCAGGATTCATAGCGGAGTTCGTCCATACATATGTAAAGTTTGTGGCAAAgATTTTATTCAACGAGGATCCTACGTAATGCATATGAGACAACATGCTGGCATTCGACCATATCAATGTGAACATTGTGGTAAAGATTTTGTACAAAAATCTTCATTAACAGTTCATATACGAACCCACACAAAAGAACGACCGTATAAATGTGATGAATGTTCAAAATCTTTTGCACAAGCCCAACAATTAAAATACCATAAACACGCAATGCAtcgtaaaattgtttttgaaaacaataCAAAATCTATAGATGACCCGGAATTAGAAATCGAAAAAGATTTCTTACAAGaagaaagagaaaaaatcataaaaactaaagaaaaaactcaaaaaaaattttcaacattatCCGTTAAGAAGAGCGAATTGAAACAATATCAGTTCATGTGTTCGATCTGTAATAAAGGATTCAAGTTGCCTTCTTCATTATCGTCACATCTAAAAATTCATACGGAAGAAAGAAAACATGTTTGTCAACAGTGTGGGAATTCGTTTAAGAGAGCGGATCACTTGAGAATACATATTAATGGTGTTCATTTAAAACATAAACCGTATGCATGTGAAATTTGTTGTAAAAGATTTGCACAGTCTGGTGATCGAAATATACATATGAGAAGACATACAGGAGAAAAACCACATACCTGTTCGTATTGTAGTAAAAGTTTTCGATTATTGAAAGCTATGCGGGCGCATATTAGGATTCATACTGGGGAGAAACCGTATTGTtgtgaaatttgtaaacaagATTTTATGACATATACGGCATTGGCAAGACCGAAGTTATTGGTCAAAGAACAATATCTCGTGGATCATGAGCAATGGGATGGTGTTGTTGGTGATGCAGCTGATATTAAAAGGGTTGCTAAGGTAAAGGCTAAGCTGATACAACTATGTGAATCAACGTTTTTTTCGAATATTAGAGAAGCTAATACTGCGAAAATGGTCTGTCAGAAGTTGGAAGCAGATTTTGATGATAAGGGTCTTACAAGACGAGTTGGACTCTTACACAGTTAA
Protein Sequence: MSDHEINEYNLNQTCRTCLRNEVDNKKLKLIFSENSFEISDELILMKLKIEENDGLPQNICNQCLEILAYIISFRNICKKSEKILLLYYKNIEFIDDEEVNKSNIEFLNVELIDRSCVSIEQYDCKSMASEDNLEWNSDCPDGKLNIVVEEYESTTDRKMSNIHQNIQVKHLFSCSKCGLENKDLEDLGKHEIEESCILLSNQICSFCKQEFENQELLENHLSEKHPKDRPHYCAICGKSFKSVSNRNSHVQSHNEDNSYSCDICDQGFKSKVYLSKHKKSVHTISHHVCNHCLIEFDNTAKFEYHLKSHEMNKKYKCKFCDKSFLQHHHLANHERTHTGLRPYLCNICGKDFKQECNFKLHLRIHSGVRPYICKVCGKDFIQRGSYVMHMRQHAGIRPYQCEHCGKDFVQKSSLTVHIRTHTKERPYKCDECSKSFAQAQQLKYHKHAMHRKIVFENNTKSIDDPELEIEKDFLQEEREKIIKTKEKTQKKFSTLSVKKSELKQYQFMCSICNKGFKLPSSLSSHLKIHTEERKHVCQQCGNSFKRADHLRIHINGVHLKHKPYACEICCKRFAQSGDRNIHMRRHTGEKPHTCSYCSKSFRLLKAMRAHIRIHTGEKPYCCEICKQDFMTYTALARPKLLVKEQYLVDHEQWDGVVGDAADIKRVAKVKAKLIQLCESTFFSNIREANTAKMVCQKLEADFDDKGLTRRVGLLHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -