Basic Information

Insect: Diogma glabrata
Gene Symbol: Coq6_1
Assembly: GCA_963693315.1
Location: OY856188.1:101563037-101571427[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2e-06 0.00024 23.8 1.8 1 23 93 115 93 115 0.96

2 10 0.00024 0.049 16.5 5.1 1 23 121 143 121 143 0.98

3 10 2.8e-06 0.00058 22.6 2.6 1 23 149 171 149 171 0.97

4 10 2.6e-05 0.0053 19.5 0.3 1 23 177 199 177 199 0.99

5 10 4.1e-07 8.4e-05 25.2 0.3 1 23 205 227 205 227 0.99

6 10 1.7e-07 3.4e-05 26.5 0.4 1 23 233 255 233 255 0.98

7 10 1.5e-05 0.003 20.3 1.7 1 23 261 283 261 283 0.99

8 10 1.9e-06 0.00039 23.1 0.2 1 23 289 311 289 311 0.98

9 10 7.2e-06 0.0015 21.3 2.7 1 23 317 339 317 339 0.98

10 10 0.017 3.4 10.7 3.5 1 23 345 367 345 367 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2e-06	0.00024	23.8	1.8	1	23	93	115	93	115	0.96
2	10	0.00024	0.049	16.5	5.1	1	23	121	143	121	143	0.98
3	10	2.8e-06	0.00058	22.6	2.6	1	23	149	171	149	171	0.97
4	10	2.6e-05	0.0053	19.5	0.3	1	23	177	199	177	199	0.99
5	10	4.1e-07	8.4e-05	25.2	0.3	1	23	205	227	205	227	0.99
6	10	1.7e-07	3.4e-05	26.5	0.4	1	23	233	255	233	255	0.98
7	10	1.5e-05	0.003	20.3	1.7	1	23	261	283	261	283	0.99
8	10	1.9e-06	0.00039	23.1	0.2	1	23	289	311	289	311	0.98
9	10	7.2e-06	0.0015	21.3	2.7	1	23	317	339	317	339	0.98
10	10	0.017	3.4	10.7	3.5	1	23	345	367	345	367	0.98

Sequence Information

Coding Sequence: ATGGCATATATACATAATAATTCTGATAATGATTCTGACTGCTTTGAAGTTGATCCCTTAGAATTTGATGATTCACTTAAAGAAACACTTATTCAGTCAATAGCAGAGCATCCAGATTCTAACTTGAAAGTAAAATTAGTCGAAAAACCAATTACTATAGAAAATGATAGTGAAATAATTCCTCCATTACGAAttgaacaattaaaaaaatgtgttagAAGTAAAACTAGGAAAAATGTTGATAAGGTGCCATCAAACAAGTGCAAAGTTGTTATCCATGACTGTGATCTTTGTgaaaaatctttcaaaaaacCATCAGAATTGATCAAACATTTACGTACACATACTGGGGAACGTCCATTTCAATGCAAAATGTGTGATAAATCGTTTGCACATCATCCAACGTTGAGAAATCACGAATATACGCATGCTAAACAGAAACCACATCCATGTCCACTTTGTAATCAAACATTTACGAGACCCTGTAATCTAAGAGCTCACATAAATCGACATACTGGTAATCTACCATTTAAATGTGATCTTTGTGAAAAATCGTATGCAGATTCTACTGCTCTAAGACTACACCAAGCAACTCATACTGGTTATAAACCATATCAATGTCAAATATGTGGTAGATCGTTTCCATTCTCACGTGAATTAAATGTTCATATTAGGATCCATACAGGAGAACGACCTTTCAAATGTGATATCTGTCCCAAAGCGTTTGCCAGAAGAGAAAATTTAacaacacatttaaaaattcatGCTGGATTAATGGAATTCAAATGCGAATATTGTGGCAAAGAATTTATACTTCGATCAAAATATAAATCAcatattaaaattcattcaaATGAAAAACCATTTATCTGTCCAACATGTGGTTTCGCTTTTATGCGATCGGAAAGCTTAAAGGTTCATATGAGAATTCATAGTGGAGTACGTCCATATCAATGTACTTTATGTCATAAAGCGTATACACGATCAAGTCAACTAAATGAACACATTACGAATCATACTGGTATCAAACCATTTCAATGTACCATATGCGAAAGAACTTTTGGAACACGGACAACACACACAAAACATGTGAAagtacataaaaaaaatatggttcCAGGATCGGAGACTAATATGTTACAACCAAAAAAATCATGTAACAAACATTATGATATTATCATCGTTGGTGGTGGTATGGTTGGTTCAGCGATGGCCTGTGCATTATCCAATTATAAAACACTAAATGATAAATCAGTATTGCTATTAGATGGAGCTCcaccatttaaatatttaaacagtGAAGAGTATAGTAACCGTGTTCTAGCTTTAAATAAAGGAACTAAGACATTATTTAAGTCGATGGGTGTATGGGAATTAATCACATCAAGAAGATTCAAACCGGTGAAAAAAATGGTGGTTTGGGATGCTTTATCTAATGCTAACATAAAATTTAATCCTGATAATTTATCAGATGATATGTGTTATATTGTTGAACAAGATTTAATTGTAGATTCATTGCTCAAAATTTTATCGAAAGGAAATAACACAGAAATAAAATGTGgcacaaaaattaaaaattgtgtaCTCACAGATACAGAAAAAAATACACGTAATTTGGTAGAGCTAGAAACTGGAGAAAGCTATGAGTGTGATTTATTAATAGGAGCTGATGGTGCAAATTCAATAGTAAGGAAACAAATGaatgataaacatttttattccGAAAATTACAATCAGATGGGTGTAGTAGcaacaataaaattgttaaatttaaataataatgataattcTACTGCTTTTCAAAGATTTCTACCTACCGGACCTGTGGCACTTCTTCCATTAACTAACGATTTAAGCTCACTTGTTTGGAGCACATCGGTTAAACACGCAAAGGAATTAATAACCATGAGTCCAGATGATTTTGTGAAAGCTCTTAATGAAGCATATACCAAAGAATATAAAAAAGATCAACTTTCTAACAGTATTATAAACGCTTTTGATTCAATACTTGGTAAAACGGATACTACAAAAATTATACCTCCTGAAGTTATTGAGgttaaagaaaattcaagaGCCAGATTTCCCTTGGGGTTTGGATTAGTATCGACATATGTCAAAACTGGTGCCGTTTTAATCGGTGATGCAGCACATCGTGTGCATCCACTAGCCGGACAAGGGGTAAACTTAGGATTTGGCGATGTACAATGTTTAACAAATGTACTATCCAACGCAGTTTATGCTGGCGGTAAATTGGGTGATTTAAATCATCTGTTGAAAtatgaacaaaaacaattacaaCATAATGTACCGGTAATGCTTGGTATTCATGGCCTACAACGTATATATAATACGGATATGAGTTTAGCTGTTGTGGCTCGTAGTATTGGACTTAAATTCGTAAATGCTGTACCATTGGTTAAGGATTTATTTATACGTAAAGCAATGGCATAA
Protein Sequence: MAYIHNNSDNDSDCFEVDPLEFDDSLKETLIQSIAEHPDSNLKVKLVEKPITIENDSEIIPPLRIEQLKKCVRSKTRKNVDKVPSNKCKVVIHDCDLCEKSFKKPSELIKHLRTHTGERPFQCKMCDKSFAHHPTLRNHEYTHAKQKPHPCPLCNQTFTRPCNLRAHINRHTGNLPFKCDLCEKSYADSTALRLHQATHTGYKPYQCQICGRSFPFSRELNVHIRIHTGERPFKCDICPKAFARRENLTTHLKIHAGLMEFKCEYCGKEFILRSKYKSHIKIHSNEKPFICPTCGFAFMRSESLKVHMRIHSGVRPYQCTLCHKAYTRSSQLNEHITNHTGIKPFQCTICERTFGTRTTHTKHVKVHKKNMVPGSETNMLQPKKSCNKHYDIIIVGGGMVGSAMACALSNYKTLNDKSVLLLDGAPPFKYLNSEEYSNRVLALNKGTKTLFKSMGVWELITSRRFKPVKKMVVWDALSNANIKFNPDNLSDDMCYIVEQDLIVDSLLKILSKGNNTEIKCGTKIKNCVLTDTEKNTRNLVELETGESYECDLLIGADGANSIVRKQMNDKHFYSENYNQMGVVATIKLLNLNNNDNSTAFQRFLPTGPVALLPLTNDLSSLVWSTSVKHAKELITMSPDDFVKALNEAYTKEYKKDQLSNSIINAFDSILGKTDTTKIIPPEVIEVKENSRARFPLGFGLVSTYVKTGAVLIGDAAHRVHPLAGQGVNLGFGDVQCLTNVLSNAVYAGGKLGDLNHLLKYEQKQLQHNVPVMLGIHGLQRIYNTDMSLAVVARSIGLKFVNAVPLVKDLFIRKAMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -