Basic Information

Insect: Diogma glabrata
Gene Symbol: -
Assembly: GCA_963693315.1
Location: CAVNZG010000903.1:51625-54437[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.032 17.1 0.6 2 23 347 369 346 369 0.95

2 12 0.25 52 7.0 2.4 1 23 405 427 405 427 0.96

3 12 6.6e-05 0.013 18.3 4.6 1 23 433 455 433 455 0.98

4 12 0.00061 0.13 15.2 1.3 1 23 461 483 461 483 0.98

5 12 0.00046 0.094 15.6 3.7 3 23 494 514 492 514 0.96

6 12 1.2e-05 0.0025 20.6 0.3 3 23 522 542 520 542 0.97

7 12 7.7e-08 1.6e-05 27.5 2.2 1 23 548 570 548 570 0.99

8 12 3.7e-08 7.5e-06 28.5 0.3 1 23 576 598 576 598 0.98

9 12 1.1e-05 0.0022 20.8 2.2 1 23 604 626 604 626 0.99

10 12 0.00041 0.083 15.8 3.1 1 23 632 653 632 653 0.97

11 12 2.3e-06 0.00048 22.8 1.7 1 23 659 681 659 681 0.97

12 12 0.00012 0.024 17.5 2.2 1 23 687 709 687 709 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.032	17.1	0.6	2	23	347	369	346	369	0.95
2	12	0.25	52	7.0	2.4	1	23	405	427	405	427	0.96
3	12	6.6e-05	0.013	18.3	4.6	1	23	433	455	433	455	0.98
4	12	0.00061	0.13	15.2	1.3	1	23	461	483	461	483	0.98
5	12	0.00046	0.094	15.6	3.7	3	23	494	514	492	514	0.96
6	12	1.2e-05	0.0025	20.6	0.3	3	23	522	542	520	542	0.97
7	12	7.7e-08	1.6e-05	27.5	2.2	1	23	548	570	548	570	0.99
8	12	3.7e-08	7.5e-06	28.5	0.3	1	23	576	598	576	598	0.98
9	12	1.1e-05	0.0022	20.8	2.2	1	23	604	626	604	626	0.99
10	12	0.00041	0.083	15.8	3.1	1	23	632	653	632	653	0.97
11	12	2.3e-06	0.00048	22.8	1.7	1	23	659	681	659	681	0.97
12	12	0.00012	0.024	17.5	2.2	1	23	687	709	687	709	0.98

Sequence Information

Coding Sequence: ATGGAAAATTCAATAATGAAAACTAATCTAATAGGAGATTGTAGTGAAAGCTCATTAAGTGATATAGAAGAGATTGTAAATCATGATAACTTTAATTCTCGATTAACTGACACAACGTCATTGTCAAGTGAATGTGTACAGCAAAttattacaacaaaacaaaatccAAACAATACTGTTTTATTAAGGGATTCCGATGAATTGCATGAAAATTTACATATAAACGAAAATCAGctaaatgaattgaataaaatatgtCGATGCTGTTTGGGGAAATACGAGGATTTGCGATTAATTTTTGATACTGATAGTTGCATATCAGATGTTATAATGATGATTTCAAATGTTCAGATGCATCCCGGTGATGGTCTTCCGCTTCAAATATGTATTCAATGTATCCTACAAGTATCACGATCATTTGcttttaaacaacaaattgaATCTGCCGATGAAACTTTGCGACAGTATGTTACACAAGGTTTTGCAAACGGAATGGAATTGCAGCATATTGAATTGCCAGAAGAATTAGTTATCGATAATTCTAATAACATGACTAAATATGTAGATGAGAATGGAATTATCGAGTTTAGCGAAATTGAAGAAAACCATGTCGACGGGCATCATAATGAGGATGACGATGAAAGCGAAGATGTTATTTTAGTACAACTAAATCAAGAAAAagataataatgaaaatgatATATGCACGATTGAAGACGATAATATTATTCTGAATAAAGAGATTCATATAAATAATTCTGAAAATTTAGctcaagaaaatatttcaaaatgtgACAAAATTGAAGAGACTAAAACCGAAAAGTTGCAAGTGAATTCTCGAGCGAGGAGAAAACAGCGTCCACTTGTGAAAAATGAATCATatatggaaaatgaaaatagCGATAGTGAGGAAAATAGTAACAATAGTAAAGAAAAAGGATCAagtgaaaaaaaacttataaatgtgaaAAAGGAAAACTCAGAAACTGAAACGGATAGTACCGAAGAGCCAGAGCTcgatgaaaacataaaaaaagttgAATGTAAAATATGCTCGAAACCGTTTAAGAATCAACAAAGATTAATCCGTCATGCAAAAGTAAAACATGGAAGTAgaaagaatattaaaaaagatgACAGTCCGGCAGATGAAATTAAGCAAACTTTTTATGATTCGAAAACCTTACAGGAAGACAAAGTCAATaaattcaagtttgaatgtACGTTTTGCAAACATGGTTTCAATATTGAATTTGATCTGAAAATTCATTATTCCCTACATTCGAACGATGGAAAATATGTATGCCTTCATTGTAAAAAAGAATGCACAACATCAATTCAATTGAGGCGACACATTCGAATACATTTTGAAGATAAACCATATAAATGTCGAGTTTGTAAAAAAGGTTTTCCTGAAATGGGATCATTGACCCGGCATTTTCGTAATCATACCGGCGAAAAGAGAGAGAAAAAACATTTGTGTAATATATGTGGCAAAGGTTATTGTGATTCCCATGCATTAATAATACATTCCCGAACACATACCGGTGAAAGACCATGGGCGTGTACTGTATGCTCAAAATCGTTTATCGATTCTCGGTTATTAAATTCACATATGAAAGTACATAGCGGAGAAAAACCGTATGTTTGTGAGATTTGCAATAAAGGaTTCACTCATCAAAGTACGTTAACAACTCATATTCGCACTCACACTGGAGAAAAACCTTATATATGTTCCGTCTGTGGAAAAACGTTTATACAATCTTCAAACTTGTCACTTCATATGCGGGTACACTCAGGCGAAAAACCGTATAAATGTTGCGTTTGTTCCCGTGGATTTGCCAGTTCATCAACACTGACAATGCATATGCGAATCCACACTGGAGAGAAACCATATTGTTGTCCGACATGTGGTAAAAAATTTGCACGTCATGATTTATCAGCGCACATGAGAATACATACAGGAGAAAAACCGTTCGCTTGTCCgcattgtaataaaaaattcaaaacctCAGGACAACTGAATCAGCATGCTCAAGTTCATACTGgaactaaaaaatttgtttgtgatatttgtttaaaaCGTTGTTCGTCCGCTATTTATCtaaagaaacatataaaaacacatACTGTTGTTGGTTTTGATGGaaatgaaactgaaaataaaCCGAAAATCAGTTCTCAAGAAACTCAGGATTCTCTAAAATGTATCGAAGAAAATAGCGAACAAAGTGAATCTGAAAACGATGAAAATCGTTCACAAAATTCCTTAATGGAAATATCAGAAatcgaaaataataaaagtgaaaCTACGGGGTTACAAAGTTTACAAACTATGGATGCAATCCTATCCTCTCTAAGTTCAACTGATATAATTCATGTTCATGTTCCTGTTTTAACAAGAAATGATctacaacaaacaaatttatcacaaaacacatattttaatagtttaGATGGTAAATATATTTACCAAGCAATCGATCCGAGTATTATGAGAATACAACAAGTACATTCTGCCGCACCGTTACAACTAAATAAGAAAGGTGTAAATATTGGAGAAAATACGAAATGA
Protein Sequence: MENSIMKTNLIGDCSESSLSDIEEIVNHDNFNSRLTDTTSLSSECVQQIITTKQNPNNTVLLRDSDELHENLHINENQLNELNKICRCCLGKYEDLRLIFDTDSCISDVIMMISNVQMHPGDGLPLQICIQCILQVSRSFAFKQQIESADETLRQYVTQGFANGMELQHIELPEELVIDNSNNMTKYVDENGIIEFSEIEENHVDGHHNEDDDESEDVILVQLNQEKDNNENDICTIEDDNIILNKEIHINNSENLAQENISKCDKIEETKTEKLQVNSRARRKQRPLVKNESYMENENSDSEENSNNSKEKGSSEKKLINVKKENSETETDSTEEPELDENIKKVECKICSKPFKNQQRLIRHAKVKHGSRKNIKKDDSPADEIKQTFYDSKTLQEDKVNKFKFECTFCKHGFNIEFDLKIHYSLHSNDGKYVCLHCKKECTTSIQLRRHIRIHFEDKPYKCRVCKKGFPEMGSLTRHFRNHTGEKREKKHLCNICGKGYCDSHALIIHSRTHTGERPWACTVCSKSFIDSRLLNSHMKVHSGEKPYVCEICNKGFTHQSTLTTHIRTHTGEKPYICSVCGKTFIQSSNLSLHMRVHSGEKPYKCCVCSRGFASSSTLTMHMRIHTGEKPYCCPTCGKKFARHDLSAHMRIHTGEKPFACPHCNKKFKTSGQLNQHAQVHTGTKKFVCDICLKRCSSAIYLKKHIKTHTVVGFDGNETENKPKISSQETQDSLKCIEENSEQSESENDENRSQNSLMEISEIENNKSETTGLQSLQTMDAILSSLSSTDIIHVHVPVLTRNDLQQTNLSQNTYFNSLDGKYIYQAIDPSIMRIQQVHSAAPLQLNKKGVNIGENTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00456440;
90% Identity: iTF_00456440;
80% Identity: -