Basic Information

Insect: Diogma glabrata
Gene Symbol: -
Assembly: GCA_963693315.1
Location: OY856187.1:129876401-129906450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 6.1e-05 0.013 18.4 4.1 1 23 136 158 136 158 0.99

2 29 0.0084 1.7 11.6 3.7 1 23 217 239 217 239 0.98

3 29 0.15 31 7.7 1.5 2 23 242 260 241 260 0.85

4 29 0.0074 1.5 11.8 1.9 1 23 266 288 266 288 0.96

5 29 0.00014 0.028 17.3 4.6 2 23 295 316 294 316 0.96

6 29 0.00051 0.1 15.5 1.2 1 23 322 344 322 344 0.99

7 29 9.4e-05 0.019 17.8 1.5 1 23 350 372 350 372 0.98

8 29 5e-05 0.01 18.7 2.3 1 23 378 401 378 401 0.97

9 29 0.0002 0.041 16.7 1.6 1 23 407 429 407 429 0.98

10 29 0.0036 0.74 12.8 4.1 1 23 435 458 435 458 0.97

11 29 0.0018 0.37 13.8 5.2 1 23 624 646 624 646 0.98

12 29 0.15 31 7.7 1.5 2 23 649 667 648 667 0.85

13 29 0.0037 0.76 12.8 2.1 1 23 673 695 673 695 0.97

14 29 0.00057 0.12 15.3 5.3 1 23 701 723 701 723 0.97

15 29 0.00043 0.087 15.7 1.7 1 23 729 751 729 751 0.99

16 29 0.00041 0.084 15.8 1.0 1 23 757 779 757 779 0.98

17 29 1.3e-05 0.0027 20.5 2.9 1 23 785 808 785 808 0.97

18 29 0.00029 0.059 16.2 1.7 1 23 814 836 814 836 0.98

19 29 0.0025 0.51 13.3 3.6 1 23 842 865 842 865 0.97

20 29 3.6e-05 0.0073 19.1 1.7 1 23 1116 1139 1116 1139 0.96

21 29 0.0059 1.2 12.1 3.6 1 23 1159 1181 1159 1181 0.98

22 29 0.15 31 7.7 1.5 2 23 1184 1202 1183 1202 0.85

23 29 0.0036 0.74 12.8 0.7 1 23 1208 1230 1208 1230 0.96

24 29 1.7e-06 0.00035 23.2 3.1 1 23 1236 1258 1236 1258 0.98

25 29 4.8e-05 0.0098 18.7 2.3 1 23 1264 1286 1264 1286 0.99

26 29 0.00081 0.17 14.8 0.7 1 23 1292 1314 1292 1314 0.97

27 29 0.00013 0.027 17.3 6.8 1 23 1320 1343 1320 1343 0.98

28 29 0.0015 0.31 14.0 4.0 1 23 1349 1371 1349 1371 0.98

29 29 0.6 1.2e+02 5.8 6.9 1 23 1377 1400 1377 1400 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	6.1e-05	0.013	18.4	4.1	1	23	136	158	136	158	0.99
2	29	0.0084	1.7	11.6	3.7	1	23	217	239	217	239	0.98
3	29	0.15	31	7.7	1.5	2	23	242	260	241	260	0.85
4	29	0.0074	1.5	11.8	1.9	1	23	266	288	266	288	0.96
5	29	0.00014	0.028	17.3	4.6	2	23	295	316	294	316	0.96
6	29	0.00051	0.1	15.5	1.2	1	23	322	344	322	344	0.99
7	29	9.4e-05	0.019	17.8	1.5	1	23	350	372	350	372	0.98
8	29	5e-05	0.01	18.7	2.3	1	23	378	401	378	401	0.97
9	29	0.0002	0.041	16.7	1.6	1	23	407	429	407	429	0.98
10	29	0.0036	0.74	12.8	4.1	1	23	435	458	435	458	0.97
11	29	0.0018	0.37	13.8	5.2	1	23	624	646	624	646	0.98
12	29	0.15	31	7.7	1.5	2	23	649	667	648	667	0.85
13	29	0.0037	0.76	12.8	2.1	1	23	673	695	673	695	0.97
14	29	0.00057	0.12	15.3	5.3	1	23	701	723	701	723	0.97
15	29	0.00043	0.087	15.7	1.7	1	23	729	751	729	751	0.99
16	29	0.00041	0.084	15.8	1.0	1	23	757	779	757	779	0.98
17	29	1.3e-05	0.0027	20.5	2.9	1	23	785	808	785	808	0.97
18	29	0.00029	0.059	16.2	1.7	1	23	814	836	814	836	0.98
19	29	0.0025	0.51	13.3	3.6	1	23	842	865	842	865	0.97
20	29	3.6e-05	0.0073	19.1	1.7	1	23	1116	1139	1116	1139	0.96
21	29	0.0059	1.2	12.1	3.6	1	23	1159	1181	1159	1181	0.98
22	29	0.15	31	7.7	1.5	2	23	1184	1202	1183	1202	0.85
23	29	0.0036	0.74	12.8	0.7	1	23	1208	1230	1208	1230	0.96
24	29	1.7e-06	0.00035	23.2	3.1	1	23	1236	1258	1236	1258	0.98
25	29	4.8e-05	0.0098	18.7	2.3	1	23	1264	1286	1264	1286	0.99
26	29	0.00081	0.17	14.8	0.7	1	23	1292	1314	1292	1314	0.97
27	29	0.00013	0.027	17.3	6.8	1	23	1320	1343	1320	1343	0.98
28	29	0.0015	0.31	14.0	4.0	1	23	1349	1371	1349	1371	0.98
29	29	0.6	1.2e+02	5.8	6.9	1	23	1377	1400	1377	1400	0.97

Sequence Information

Coding Sequence: ATGCTAATATTTACGGATATAGTAAAAACACCGTTTCATAACGATACAGAAAATCCTTTCCAACGCCTAGGTACCAATGAACACTCATTAGATGATAAACATTTTACACCCTATAATTTTGACAAAGATACTGATGACGACCAAGGTGATCTAAAACCGTTAAACGAACTTCGATTGCAAAAAACATCTAGCGAATCTATTTTACACGCGCcagtttttgaatttaaagaTGTCCAAGACGAACAATTTAATCATAATGAATTAGTTTTCGACTTAGATAAAATTGACGATATAAATGTTAAGTGCAAAAAGATAATCAATGAAGATAAACTTTATGATACACAAAACTTGAAGACCAAATCTTCAACTAAAGAAAAGAGAAAAAGTTCACAGcctaaaaaaacatttaaatgtGAAAAATGTAATAAAGATTACACAACGAAATTTAACTATTTACGTCACATAAAAAGTCATGCAACTTTCGAATTTAAAAATGTCCAAGACGATCAATTTAATCATAACGAGTTAGATAAAATTGACGATATAAATGTTaagtgcaaaaaaataattaatgaattTGAAGTTCGTGATACACAAAACTTGAAGCCAAAATCATCAActaaagaaaacaaaaaaactaaaaaaacttttaaatgtgAAAAATGTAATATAGAGTACAAACAGAAATTCTTCTATTTACGTCACATAAAAAATCATGGAAAGAAATGTGAAATATGTGGTAAAAGATATCGTGATTATAAAATACATATGAGCACGCATACAGGAGAGAAATTACATCCGTGTAAAGAATGTGGGGTACATTTTATGACAAAAACCCTCGTAAAAATACATATGGTTTCACATGCAGTCGAACGACCGCTTGAGTGCGATGTGTGCAAAAAGACATTTAGGTTGAAATATCATTTAAATCAGCATATGCACATACATTATAAGAAGCATCCGTATAAATGTGAAACTTGTGGTAAAACTTTTCTACGTAAcatagtactagaaaatcacAAACGTACGCATACAAAAGAAAAACCGTTTGTTTGTAGTTTTTGTGGTAAATGTTTTACTGTAAGCAATGCATTAATTAGTCATAACCGAATTCATACTGGCGTAATGTCATATAAATGTGATTTATGTGATAAACAGtttaattatttggaaaatttaaaaaaacataaattgcgGATGCACACAAAGGAGAAACCATATAAATGCAACTTCTGTGATAAAGCTTTTAGTGATAGCACTACACGTCGGGATCATGAGCGTATACATACTGGAGATTATCcatataaatgtttattatgcGGCAAAGGACATAATCATCCAAGTAATTTAAAGTATCATATGAGATATATGCATAAGGACGAAATAAAATGTGAAGAGatcgatgaaattgaaaaatgtgaTTTACCCAAACGATGTGATATTGTTGGAATAAAAACTGAGCCAGAACTGCTAATATTTACAGATATAGTAAAAACATCGTTTCACAACGATACAGAAAATTCTTTCCAACGCTTAGGTACCAATGAACACTCATTAGATGATAAACATTTTACACCCTATAACTGTGACAAAGATACGGATGACAATGAAGGTGATCTAAAACCGTTTAATGAACTTCgattacaaaaaatatcaagTGAATCTATTTTACAAGCGCcagtttttgaatttaaagaCGTCCAAGACGATCAATTGAATCATAATGAATTAGTTTTCGACTTAGATAAAATTGACGCTATAAATGTTAagtgcaaaaaaataatcaatgAAGAAGTTTATGATACACAAAACTTCAAGACCAAATCTTCAACTAAAGAAAAGAGAAAAAGTTTACAgcataaaaaaacatttaaatgtgaaaaatgtaacaaaaattACACAACGAAATTCTTCTATTTACGTCACATAAAAAATCATGGAAAGAAATGCGAAATATGTGGTAAAAGATATCGTGATTATAAAATACATATGAGCACGCATACAGGAGAGAAATTACATCCGTGTAAAGAATGTGGGGTACACTTTATGACAAAAACCCTTGTAAAAATACACATGGTTACACATTCAGTCAACTCTCCGTTTGAATGCGATGTGTGCAAAAagacatttaaaacaaaatatcgtTTAACTCAGCATAAGCACATACATTATAAGAAGCATCCGTATAAATGTGAAACTTGTGGTAAAACTTTTCTACGGAACATAGTACTACAAAATCACAAACGTACGCATACAAAAGAAAAACCGTTTGTTTGTAGTTTTTGTGGTAAATGTTTTGCCGTAACCAATGCATTAACCGTTCATAATCGAGTTCATACTGGAGCAACGTCATacaaatgtgatttttgtgatAAACAGTTTAATCgtttggaaaatttaaaaaagcaTAGACTACGGATGCACACAAAGGAGAAACCATTTAAATGCAACTTCTGTGATAAAGCTTTTAGTGATAGCACTACACGTCGGGATCATGAGCGTATACATACCGGCGATTATCcatataaatgtttattatgcGGTAAAGGACATAATCATCCAAGTAATTTAAAGTATCATATGAGATATGTGCATAAGATGACCACTTCTTCCGAGATCGTTAAGCTGCCGGGACAGGAGTCATCAGCAAAAAGTAAAACATTACACTCCATGCCTACAACtatatcatttataaataacGAATACAAAGGACCAAGGTTGGATGCCTGCGGTACCCCAGATAATAGCATAAAATTATGGGACTTTAGCCCGTTTATTTCTACGCAATTAAATCGGTCTCTTAAACATGATGATAGCCAAAAAACAATAGCATTACCAAACCCAAAGAACGAAATAAAATGTGAAGAGatcgatgaaattgaaaaatgtgGTGGTTTATCCGCACCAAGCGGTattgctgaaattaaaaatgaacCAGAACtgttaatattttcaaatatagtAGAAAAACAATTTCATAACGAAACAGAAAAACATTACCAACGCTTAGATACCAATGAACATACAGTAGATGGTGAATATTTTACACCATATAATTGTGACAAGGATACTGATGACGATAAAAGTGATCTAAAACCGTTAAAcgaatttcattttcaaaaaatatcaaacgAATCTATTTTACATGCGCcaagtatcaaatttaaaaatatccaAGATGATCAATTAAATCATAATGAATTAGATTTCGACTTAGATAAAATTGAGCATTTTAATGTTAAGTGCGAAAACATAATAAATGAAGTTAAAATTTGTGATACCCAAAAATTGAAGACAAAACCTAAAACTAAAGAAAAGATAAAAAGTTTACAAcctaaaaaaacttttaaatgtgAAATATGTAATAAAGATTACACAACGAAATTCAACTATTTGCGTCATATAAAAGAAATTCATGGAATTTTCAAATCTAAAACTaaagaaatggaaaaaagtttacggactaaaaaaacttataaatgtgaaAAGTGTAATATAGAGTACAAACAGAAATTCTTCTATTTACGTCACATAAAGAATCATGGCAAGAAATGTGAAATATGTGGTAAAAGATATCGTGATTATAAAATACATATGAGTACGCATACAGGAGAGAAATTACATCCGTGTAAAGAATGTGGGGTACGCTTTATGACAAGAACCCTTGTAAAAATACATATGGTTTCACATGCAGTCAACTGTCCGTTTGAGTGCAATGTGTGCAAAAAgacatttaaatcaaaatatcgtTTAAATCGGCATATGAACATACATTACAAAAAGCATCCGTATAAATGTGAAACTTGTGGTAAAACTTTTCTACGTAACTTTGAACTAGAAAATCACAAACGTACGCATACAGGGGAAAAGCCGTTTGTTTGTAGTTTTTGTGGTAAATGTTTTGCCGTAAGAAATGCATTAATTGGTCATAACCGAATTCATACTGGCATAATGTCATATAAATGTGATTTATGTCATAAACAGTTTAATcatttggaaaatttaaaaaaacataaacgaCGAATTCACACAGCGGAGAAACCATATAAATGCAACTTCTGTGAAAAAGCTTTTAGTGATAGCACTACACGTCGACATCATGAGCGGATACATACCGGAGATTATCcatataaatgtttattatgcGGTAAAGGACATAATCATCTATGTAATTTAAAGTATCATATGAGATATGTGCATAAGGTGACCACCTCTTCCGAAAGCATTGAAATGCCGGAGCAGGAGCATTAG
Protein Sequence: MLIFTDIVKTPFHNDTENPFQRLGTNEHSLDDKHFTPYNFDKDTDDDQGDLKPLNELRLQKTSSESILHAPVFEFKDVQDEQFNHNELVFDLDKIDDINVKCKKIINEDKLYDTQNLKTKSSTKEKRKSSQPKKTFKCEKCNKDYTTKFNYLRHIKSHATFEFKNVQDDQFNHNELDKIDDINVKCKKIINEFEVRDTQNLKPKSSTKENKKTKKTFKCEKCNIEYKQKFFYLRHIKNHGKKCEICGKRYRDYKIHMSTHTGEKLHPCKECGVHFMTKTLVKIHMVSHAVERPLECDVCKKTFRLKYHLNQHMHIHYKKHPYKCETCGKTFLRNIVLENHKRTHTKEKPFVCSFCGKCFTVSNALISHNRIHTGVMSYKCDLCDKQFNYLENLKKHKLRMHTKEKPYKCNFCDKAFSDSTTRRDHERIHTGDYPYKCLLCGKGHNHPSNLKYHMRYMHKDEIKCEEIDEIEKCDLPKRCDIVGIKTEPELLIFTDIVKTSFHNDTENSFQRLGTNEHSLDDKHFTPYNCDKDTDDNEGDLKPFNELRLQKISSESILQAPVFEFKDVQDDQLNHNELVFDLDKIDAINVKCKKIINEEVYDTQNFKTKSSTKEKRKSLQHKKTFKCEKCNKNYTTKFFYLRHIKNHGKKCEICGKRYRDYKIHMSTHTGEKLHPCKECGVHFMTKTLVKIHMVTHSVNSPFECDVCKKTFKTKYRLTQHKHIHYKKHPYKCETCGKTFLRNIVLQNHKRTHTKEKPFVCSFCGKCFAVTNALTVHNRVHTGATSYKCDFCDKQFNRLENLKKHRLRMHTKEKPFKCNFCDKAFSDSTTRRDHERIHTGDYPYKCLLCGKGHNHPSNLKYHMRYVHKMTTSSEIVKLPGQESSAKSKTLHSMPTTISFINNEYKGPRLDACGTPDNSIKLWDFSPFISTQLNRSLKHDDSQKTIALPNPKNEIKCEEIDEIEKCGGLSAPSGIAEIKNEPELLIFSNIVEKQFHNETEKHYQRLDTNEHTVDGEYFTPYNCDKDTDDDKSDLKPLNEFHFQKISNESILHAPSIKFKNIQDDQLNHNELDFDLDKIEHFNVKCENIINEVKICDTQKLKTKPKTKEKIKSLQPKKTFKCEICNKDYTTKFNYLRHIKEIHGIFKSKTKEMEKSLRTKKTYKCEKCNIEYKQKFFYLRHIKNHGKKCEICGKRYRDYKIHMSTHTGEKLHPCKECGVRFMTRTLVKIHMVSHAVNCPFECNVCKKTFKSKYRLNRHMNIHYKKHPYKCETCGKTFLRNFELENHKRTHTGEKPFVCSFCGKCFAVRNALIGHNRIHTGIMSYKCDLCHKQFNHLENLKKHKRRIHTAEKPYKCNFCEKAFSDSTTRRHHERIHTGDYPYKCLLCGKGHNHLCNLKYHMRYVHKVTTSSESIEMPEQEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -