Basic Information

Gene Symbol
DNAJC1_1
Assembly
GCA_963693315.1
Location
OY856187.1:336266630-336273585[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.81 4e+03 0.5 0.0 7 25 24 42 21 62 0.73
2 4 0.00042 2.1 11.0 0.0 3 33 295 328 293 335 0.82
3 4 6.2e-10 3.1e-06 29.6 0.1 3 44 378 424 376 426 0.90
4 4 7.1 3.5e+04 -2.5 0.1 8 18 449 459 447 459 0.85

Sequence Information

Coding Sequence
atgaggtgtaaaaatattataaaatttttaattttaatattatgcGTAAACTATGCGTATTCATGGGACTCTGAAGAATTAGAAATATTTGATTTAGTTGAAGAGCTGAAGGATAATTTCTATACAATGATGGGTATTCAACAGGATGCAACATTACAAGAAGTGAAAAAAGCTTTTCGAAATCTTTCGATCATACTTCATCCGGATAAAAATGATGCTGAAGATGCAGATATACAATTTCGTAATTTAGTTTCCGTATACGAAGTTTTAAAAGATCCAGGGAAACgtgaaaaatataataatgttttgAAAAACGGTTTACCAAATTGGAAATCAGCTTTATATTATTATCGTCATGTTCGTAAAATGGGGTTACTTGAAATGTCGATTATTTTATTCGTTATAATAACAATTGGgcaatattttgtttcttggGCTGCAtatctagaaaaaaaatatacagcGGAACAAATTATTGGATCGAAGTTAAAGCGATTACAAAAAAAAGCCAAGACAAGTATTGATATTGAAGAAATATTAAAGGAAATTCCACCTCCAAGTATCAAGAATACGTTACCGTTTCAAATACCGTTAGCAATATGGAATATACCGTCGtttataaaacaaatgtttggCTTGTATTCAGAATACAAGGAAGCGAAGCTAGAAGAAAAGAGAAGAGAAATGGAAGAAGATGAGAAAATGAGACTATTAGAAGAAGAAATGGCTAAGTTGAAGGAAGCCAAAAGTACAAGAAAACGAAAACCAATATTTGTAGCTCCTGAGAAAACTGAAGAGGAACTATTAAATTATAGTAAAAAAGTTGAACGACCggatattattcaaaatttggGAAGCGCTAAGgCAATGGTAACCGGAGGAATATGGACCGATGAAGATTTGACAGATTTAGccaaattaatcaaaaaatatcCAGGTGGTACAATTGATCGTTGGGAAATTATTGCCGATGCCTTGTATCGTAACGTTACCGAAGTAACACATATGGCTgcaaaattaaaagaaaatggcTATCGAATAGGGAACCCAACTGAAAGTGTTGCCGAAAATATTGCTATTAAGAAAAACGAGAAAACCAAAAAATCTGATCAAATTTTAGTACCCGAATCAACATGGTCACAAGAACAACAACAGGCATTAGAAGCAGCAATTGTAACTTATCCCAAAACAAGTGCAACTGATCGTTggcaaaaaatttcaaatagtGTTCCTGGCAAAACCAAAGAAGAATGTCTGTTACGttataaatatttagttgagTTAGTAAAACTACAACGTAAGCAGGCTCAAGAAAAAGAGGAagaagttaataaaaataaaaccgaTGATGATAAATTGGAAGATTATGTTGAGGAGGATGATAAAAcgcaaattttaaaatcaaagaaaaaaaaatctaatgaGAAAGCAGAACTTCAGAATGATAATGAATCTGTGATAAAAGGTAAGAAACGAAATTTGCGAAAACTTCGAAAGAAGAATATGGATTTTTCAACGGATGAGGATTCTGAATCTGGGAATGAAAATGGTGCAGTCATTTATGATTAA
Protein Sequence
MRCKNIIKFLILILCVNYAYSWDSEELEIFDLVEELKDNFYTMMGIQQDATLQEVKKAFRNLSIILHPDKNDAEDADIQFRNLVSVYEVLKDPGKREKYNNVLKNGLPNWKSALYYYRHVRKMGLLEMSIILFVIITIGQYFVSWAAYLEKKYTAEQIIGSKLKRLQKKAKTSIDIEEILKEIPPPSIKNTLPFQIPLAIWNIPSFIKQMFGLYSEYKEAKLEEKRREMEEDEKMRLLEEEMAKLKEAKSTRKRKPIFVAPEKTEEELLNYSKKVERPDIIQNLGSAKAMVTGGIWTDEDLTDLAKLIKKYPGGTIDRWEIIADALYRNVTEVTHMAAKLKENGYRIGNPTESVAENIAIKKNEKTKKSDQILVPESTWSQEQQQALEAAIVTYPKTSATDRWQKISNSVPGKTKEECLLRYKYLVELVKLQRKQAQEKEEEVNKNKTDDDKLEDYVEEDDKTQILKSKKKKSNEKAELQNDNESVIKGKKRNLRKLRKKNMDFSTDEDSESGNENGAVIYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-