Basic Information

Insect: Diogma glabrata
Gene Symbol: clz9_16
Assembly: GCA_963693315.1
Location: OY856188.1:241153047-241155665[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-07 0.00019 23.5 0.0 3 39 15 51 14 54 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-07	0.00019	23.5	0.0	3	39	15	51	14	54	0.90

Sequence Information

Coding Sequence: ATGGGGCcggtaaatttaaataaaaaaatatataaaaactacGAAAAATTGCCAGAAGCCGTTGAGGCCATTGAAAATGGAATGTCTGTATATTCAtcctcaaaaaaatttaaaataccgAAAACGACGTTACTAAGGAAGATAAAGAATAAGAAGAACAATATTGCTGATGTTGCTGCAGGTGCAAGTTGTGTATTATCAAATGAGCAAGAGCAGCATTTATGCAAATGCATCAAAAAGTCCTCCAGAAGAGGATTTTCAATATCCAAAGCTATGCTTTTTGATTCAGTTGCACTTTTAGTGAAAGACCTAAATTTGCCCAATAAATTTCGCAATGGTCGTCCAGGAAAATTCTGGTACAAAGGATTCCTCTTAAGAAATCCAGATATATCCACTAGAGTGGCACAAAATATCTTGACCACAAGAGTAGCTgcaactgaaaaaaaaatagtggATTGGTTCCAAGAAATTTCGTCATActtgacagaaaaaaatttgatagaTGTAATGGAGGATCCAAGTCGCATCTTCAACTGCGACAAAACAGCATTCTTTTTAGCACCAAAAGATAATCTTGTACTTGCAGAAAAAGGCCAAAGGTGCGTATACAACTTAAACGCAAATGACGACAAAGAGTGTCTTACTACAATGGTAATGGCAAGCGCCAATGGTAAACTAGGACCAACAATGCTCATGTTTGATTACAAGCGTATTCCACAAAACTTGGCCCAAAAGGTACCACTTGGATGGGCTATCGGTAAAAGCGATTCTGGATGGCAAACAGGGGAATCATTTTACGAATACGTTGCCAATATTTTTTATCCATGGATATTGGAACAAAAGCTACAGCTTCCAGTAATATTATTCGTCGATGGGCACACGTCTCACCTTACTCTTTCGCTGAGTGAATTctgccaaaaaaatcaaataattttagtGGCATTACCTCCTAATGCTACTCACATAATTCAACCACTGGATGTAGCAGTTTTTAAACCGCTAAAAAGTGCTTGGAAAAATGCAGTAACGAAGTGGCGGTTCGAAAATAATGGCGCTAAAATCAAACGAGACGACTTTGCTCCATTATTGAACTCGATTCTTCTCAAGCCAGAAGTAAACCAAAACGTTAAAAGTGGTTTTAAGGCCACAGGACTCTTTCCGTTCAACAAAAATGCAATTGATTACGGCAAATTTATTTCGAATAATTTAACTTCTGTAAGTACGCCAATTCAAAAAATGTCTATTACAAAAAATAGCACATTTTTAACGTTATTGGAAAGAGAGATTccagaaaaaattgaaaaatttaattcaaatttaatatgTCACGAAAATTGGGAAAGGCCAAAAGAAGATGAAAGCCTATTTACTTTATGGAAAAAGCATAAAGATATGGAAGAAGCCATTCCTATTGGTGACAGCACCCTACAAAACAATATGACGATGgatgctgaaaattatttaaatgatttacttgGAGAAAATGATATGGTCgagttaaatattttggaagaCGGTTTGGTAGAAAATGCTCCAAGAAAAGATTTATcagatgaaaatattttaaatgtaccaacaccatttaaaaaaatattattttggccAAATAAAGACCCAAAGGAACCcgtaaaaaaaaaagaaaaacttccCGCTGTCGCATCCTCAGAACAATGGGTCACATATCATCAAAGAAAACAAgatgcaaaagaaaaaaaaacaaaggagagtttgcaaaaaaaagaaaagcGGCAAGCTAAATTAAAAACGCAAGAGATTAAAGTTAAAATCACCAAGAAACCGGAGAATTCCAAAACAGGAAACTATGCGATAAACAATTATGTAATTGTAAACTACGAAGGAGAAAAGTTTCCTGGGATAGTCGTAGATTTAAATGGCAATGAATTCTTCGTCAAGACAATGACAATGTGTGGTCCTAACTGGAAGTGGCCAGAAAGAGATGATACTTGTTGGTATAAGTTGGGCCAAATGGTATCATTAATTGATGAACccattttaataaattcaagaGGGCTgtataaagtaaatttttaa
Protein Sequence: MGPVNLNKKIYKNYEKLPEAVEAIENGMSVYSSSKKFKIPKTTLLRKIKNKKNNIADVAAGASCVLSNEQEQHLCKCIKKSSRRGFSISKAMLFDSVALLVKDLNLPNKFRNGRPGKFWYKGFLLRNPDISTRVAQNILTTRVAATEKKIVDWFQEISSYLTEKNLIDVMEDPSRIFNCDKTAFFLAPKDNLVLAEKGQRCVYNLNANDDKECLTTMVMASANGKLGPTMLMFDYKRIPQNLAQKVPLGWAIGKSDSGWQTGESFYEYVANIFYPWILEQKLQLPVILFVDGHTSHLTLSLSEFCQKNQIILVALPPNATHIIQPLDVAVFKPLKSAWKNAVTKWRFENNGAKIKRDDFAPLLNSILLKPEVNQNVKSGFKATGLFPFNKNAIDYGKFISNNLTSVSTPIQKMSITKNSTFLTLLEREIPEKIEKFNSNLICHENWERPKEDESLFTLWKKHKDMEEAIPIGDSTLQNNMTMDAENYLNDLLGENDMVELNILEDGLVENAPRKDLSDENILNVPTPFKKILFWPNKDPKEPVKKKEKLPAVASSEQWVTYHQRKQDAKEKKTKESLQKKEKRQAKLKTQEIKVKITKKPENSKTGNYAINNYVIVNYEGEKFPGIVVDLNGNEFFVKTMTMCGPNWKWPERDDTCWYKLGQMVSLIDEPILINSRGLYKVNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -