Dgla031589.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:312465083-312471561[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 0.00012 24.2 0.0 5 38 1 34 1 38 0.94
Sequence Information
- Coding Sequence
- ATGCGTAAAGCACTTGAGGAGTTTCGTAGTGggcaaattaaatttaatagaagTTGCAAAAAGTATGGTATCCCGAAACCAACATTTAGACGTCATCtaaatgatataaatattaaagcTAAGGAAGAAAAGAAAAGCTTTGGACGTTTACCCGTTTTTTCCAAACCGATAGAAGACCAACTGGAGGAACATCTTTTAATTCTAGaacaacaattttttggaatcgGGATAAATGACGTTCGAAGATTGGCCTTTGAACTAGCCGAAAAAAATCAGATAAAGCACAGCTTTAACAAGGACACAAAGTTAGCAGGgaaaaaatgcttttacaatTTTATGAAGAGACATCCAAGATTGACTGTGAGGCAACCAGAAGCAACGTCGATGGCAAGAGCTCGAGGATTTAATTGGGTTAGCGTGGATAAGTTTTTCGATTTACTTGAACAGTTATGTGATGAAAATAGTGTCGATGGGACAAGAATTTACAACATGGATGAGTCGGGTTTTTCGACGGTTCAAAAACGATGCCAGAAAATACTGGCACTCAAAGGTAAAAGGCAAATTGGTGTTGTTTCAAGTGGCGAAAGAGGAGTTCACACCACAATTGTTTGTTGTATGAGTGCATCGGGTCATTTTGTGCCCCCATTgataattttcaaaagaattagAATGATTGACGACTTAAAAATTGGATGCCCAATGAGCAGTTTCGTTGAATGCTCAGAAAATATTTACAATCATAACATGGATGACAAACCCAGGAAGAAAAAGAAGTCTGGCCATGACTATaggaaagaaaaagaaattggGCATAGAAAAGAAGTTGCATCAACGTGTTCCAAGATTACAAAGTTTTGGGCACCCAAGACAAAGACTGACGATTATGGACTCATTCAAGCAAGTTCCTGCTCCGAGACTTTGAACGACGACTCAACATTACCGACGACTTCTAATATTGAAGGCCCAGGGAAGGGATTTAGAAGAGAATATAGAAATCGAGTCATCACATTCACATCTAATGGACATTGA
- Protein Sequence
- MRKALEEFRSGQIKFNRSCKKYGIPKPTFRRHLNDINIKAKEEKKSFGRLPVFSKPIEDQLEEHLLILEQQFFGIGINDVRRLAFELAEKNQIKHSFNKDTKLAGKKCFYNFMKRHPRLTVRQPEATSMARARGFNWVSVDKFFDLLEQLCDENSVDGTRIYNMDESGFSTVQKRCQKILALKGKRQIGVVSSGERGVHTTIVCCMSASGHFVPPLIIFKRIRMIDDLKIGCPMSSFVECSENIYNHNMDDKPRKKKKSGHDYRKEKEIGHRKEVASTCSKITKFWAPKTKTDDYGLIQASSCSETLNDDSTLPTTSNIEGPGKGFRREYRNRVITFTSNGH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -