Dgla087136.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856188.1:210630100-210632007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-08 4e-05 25.7 0.0 6 43 14 51 9 53 0.88
Sequence Information
- Coding Sequence
- ATGCCAAAAAGAAATTCATCTTATTTGGAGGAAAATAACCAAAAGGCTTGTGATGCTGTCATTAATGGAAAAATTGGCAAAAAGACTGCTTCGAAAATATTTAACGTTCCTCGTTCCACTATTCAATATAGATTGTCCgataagtttaaaaaaagtCGGCCTGGGCCAATGACAGTTTTGACTACGAAGGAAGAGTCTATAATAATTGACTGGATCGTTGAAAGCGCACGGAAAGGCTTTCCAAAACATCGCGAAGATATCGTAGAAGCTGTTAAACGGTTTTTGGATGAAAGTCCACGTGAACATCCCTTTGGACCGACCAATAGGCCTGGTAAAGGTTGGTACAATCTGTTTTTGAAAAGACATCCAAGCATAACTACTAGAATACCGGAACCGGTAACAGCGGCTAGTTCAAAAGTTTCTGTCGACAATATACATAATTGGTTTgttcaaattgaaaattatttgatgaataaaagtttgttttccattttatCTGAACCAGACAGAATTTTTAATGGTGAtgaaaccaattttttactCTGCCCTAAAACGAAAAACGTACTGGCAAAAGTTGGAAGGAGGAATGTGTATGAGGTCGAGCAAGGCTTATCAAAGAGTTGCTTAACAGTTATGTTCAGTTTCTCAGCTTCGGGAAGTATGATACCACCAATGGTAATCTATCCTTACAAACGGATTCCGGATAGCATTCGAAATTCAGTTCCTCAACACTGGGGTGTTGGAAGAAGTGACAGCGGTTGGATGACGAAAGAGgtattttttgaatatatttcgAATGTATTTTATCCTCATGTACTAAAAACTGGCACCCAGTTTCCTGTTATTTTGTTCGTGGATGGACATTCAACACATCTCACCTTTGAATTAAGCGTTTTGTGCAAAGAACTACAAATAATATTAATCGCTTTGTTTCCGAATGCTACTAGAATTTTACAGCCATGTGATGTGTCGGCATTTAAGCCTCTGAAATCGGCTTGGCAACAAATTATCAGGGACTGGAAACGTGAAAACTTAGACGGTATTTTAACGAAAGAGACTTTCGCACCACTGCTAGAAAAGGCAATTAAGGCAGCAGAAAATCCGATTTCAATTATAAATGGGTTTAGAGCTTGTGGGAAATCATTTTCAAACGACCATCGAAAAATTCAACCGTCACCTGGCCCCATAGTAGAAACTGATCATTTAATATCTTCTACCATCAGCATTcaacaattttcaaatattgtaGGGCCAAAATTGCGCGAACTGGAGCTAGCAACAGAAGTAGATATGCCACAAAAAAACAATGAGTTTCAATATTTGCTTCAAATATATAAAGCTCTCTTACCTTCGTTGAATAACAACCACCCAATTAACATACTGGAAATTAATGATTTTGTGTTCTTACCTAACGAATTTGAGCTGGATCCACCTGAATCTGTAGAACGAAACGAAACAGAATCTGCCCAAAACGCAACTGATATACAAGATGAATTATGTATTCAAAAGCTGAATAAAACTGACGATTGCCCTCCTGAGTCCTTAAAGGACATAGACAAATATTTGAGATGGATTAAAACGCCAGAACGAAAGAACCAGGGGAAAGCTAAAGAAAGCCTACCTTTTGTTGTAACCTCATCAGGCTATGCAAAAATTCAGGAAGAAAAACGCAAACAACAAGAGAATAAAGAGCCAGAAAAAGAAAGACGGCAACTGCAAAGAATACAAaataaggaaaacaaaaaaaaattcaggaaaacaaaaagaaaattcagGAAGACAAgttaa
- Protein Sequence
- MPKRNSSYLEENNQKACDAVINGKIGKKTASKIFNVPRSTIQYRLSDKFKKSRPGPMTVLTTKEESIIIDWIVESARKGFPKHREDIVEAVKRFLDESPREHPFGPTNRPGKGWYNLFLKRHPSITTRIPEPVTAASSKVSVDNIHNWFVQIENYLMNKSLFSILSEPDRIFNGDETNFLLCPKTKNVLAKVGRRNVYEVEQGLSKSCLTVMFSFSASGSMIPPMVIYPYKRIPDSIRNSVPQHWGVGRSDSGWMTKEVFFEYISNVFYPHVLKTGTQFPVILFVDGHSTHLTFELSVLCKELQIILIALFPNATRILQPCDVSAFKPLKSAWQQIIRDWKRENLDGILTKETFAPLLEKAIKAAENPISIINGFRACGKSFSNDHRKIQPSPGPIVETDHLISSTISIQQFSNIVGPKLRELELATEVDMPQKNNEFQYLLQIYKALLPSLNNNHPINILEINDFVFLPNEFELDPPESVERNETESAQNATDIQDELCIQKLNKTDDCPPESLKDIDKYLRWIKTPERKNQGKAKESLPFVVTSSGYAKIQEEKRKQQENKEPEKERRQLQRIQNKENKKKFRKTKRKFRKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455870; iTF_00455871; iTF_00455872;
- 90% Identity
- iTF_00455872;
- 80% Identity
- -