Dgla053162.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856187.1:169029607-169033582[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 2.6e-07 32.7 0.0 5 36 17 47 13 56 0.86
Sequence Information
- Coding Sequence
- atgGTTCGTAATTACAAACGAAAGACACAAAAACGTGATGAAAATGGTATTCGTCGAGCAGTAGCTGCGATGCAAATGGGGATGTCTTTACGTGCTGCTGCTCGTGATTTTGGCATTCCGAGGTCGACATTGTTATTGCACCACCGTGCCAATGAAGTAACTACGCAACCTACTGAGGTGGACTTGAACAGCATTACTATCACTTCTCAAGGCCGTGATACTGTGTTCACCAAAGAACAGGAAACCGCTTTTGAAGAATATTTGAAACACGCTTCTGATGTTTTTTTCGGTTTGACCGCCACTCAAACAAGACTGTTGGCATACGAATTTGCTGTACAAGTAAGAGCCAAGTTTTCTGAATCATGGAAAGATGAAAAGAAGGCTGGATTAGATTGGTTTCGTGGTTTCATGCATCATCAACGACTTTCGTTACGAAGGCCAGAAGCAACTAGTATAGGGTAG
- Protein Sequence
- MVRNYKRKTQKRDENGIRRAVAAMQMGMSLRAAARDFGIPRSTLLLHHRANEVTTQPTEVDLNSITITSQGRDTVFTKEQETAFEEYLKHASDVFFGLTATQTRLLAYEFAVQVRAKFSESWKDEKKAGLDWFRGFMHHQRLSLRRPEATSIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01088141; iTF_01088081; iTF_01088082; iTF_01088083; iTF_01088087; iTF_01088062; iTF_01088255;
- 90% Identity
- iTF_01088083;
- 80% Identity
- -