Dgla042777.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- lola_1
- Assembly
- GCA_963693315.1
- Location
- OY856187.1:8478130-8480100[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-11 1.8e-08 36.4 0.0 2 45 375 418 374 418 0.92 2 2 1.7 1.4e+03 1.6 0.6 4 20 507 522 506 522 0.91
Sequence Information
- Coding Sequence
- ATGGGAAGCAGCGAGGGTCAAACATACTGTCTCCGATGGAACAACCACAAATCAAATTTGGTGGAAATTTTGGATGCTTTGATCAAAATGGAATCATATGTTGATTGCACAATATACGTTGATGATCGTGTACAGTTTAAAGCACATCGCGTTGTTTTAGCAGCTAACTCACCATACTTTCAAACAATATTACAAGGAGTACCTATGGACCATTGCACGATATTGTTTCCAGAGGTCAAAGCATTTGAAATGCGTGCATTGTTAGAATATATGTATACAGGCGAAGTTAATGTTACACAATCACAAATACCTAGAATTATGAAAATAGCACGTGAATTAGAAGTTAAAGGATTATATGATATGGCTGATTTGAAAGATCTTAAAGATGACCAATCACACACATTTACAGCTCTCAGTAATAgcacattaaaaacaaataatcatCACAATAACACAACATTATCAAACACATCTCATTCcaataatataaataatcatAATCAACATAATTTACATCATTCACATAATCAATCATCACCCATTATAACAACATCAACAAATATAACACAAGCTCAGAGTAGTTCCTCATCTCCTCCTTATAGTTATAAATCACCATATTCGAGTTTATATTCACGAAGTCCTGTACCTACATCCTCAGACCGTTTACCACAATGGCCTCCACATTTACCTCAATCAATTCCATCTCAGCATTTACAAAACGCTGCGGCTGCTATGCTCAGTTCGGTATACGATTCAGGTTCAGATATGAATCCGTTGAAACGAAAGAAATTATCATCAATATCAAGCATGCTAATGTCACGTGATACACCGATTTTACGAAATGTTTTGGCCCAATCAAATGCGGCCGATTCATCACAACCTGTTCCATTAGTATGTCAAACTGTAGATAATGATCGTAGCGATCGACACAGTGGTCATTCGAATGGAACAGATTATTCTGATAAGaaaataaaatatgagGAGGCACATTCTCCATATACAGATAAATCGTTTGATGATGAACCTTTAGACCATTCACAATCGTATTCAGGATCTGATTCACGAATTGCATCATATGTACCCCAACAAAAACCAGAATGGAAACGATACAAACAGTATACTAGAAATGATATTCTATCTGCCATCGATTGTGTAAGAAATGGAATGTCAGCATTACAAGCTTCACGAAAATTTGGCGTACCTTCACGTACTTTATATGACAAAGTGAAAAAACTTGGAATCACAACTGGACGTCCAATGAATAGAAGCATAAAAAGAAGCCCCAGTCATGGTGGTAGTCCAGCTGGTTTCCCTTATGGAATTACAGGAACAAGTAGTCCTTATGGTCATCACACTCAAGAAAGCCATCCATCACAGTCACAGCATGATAATGAACGTGATCATATCCCTCCAACAATACCGCATCCGGCAGCTGCTCTACTAGATGCTACATTTTTACAACAAGCGTTAGAAGCACGAGGTGGTGATATCGCAGGTCGGGAAGCTCTCCATGCAATGGCATTTGCAGCAGCAGCACATGCAGCTGTTAATGGCATTTCGACCAGTCCCGGTACACATGGTACAGCAAGATCACCAAGTCCAGgtattttaatgaaatatatCCGACCTTCCACACCATCGCCAACTCCAGAAAAACTCGAGGATAGTGATCACGTGGAAGATTTGTCGATGTCAAAAAAAGATACGGATCGTTCCGTAACACCTATGTCAGGTTCACATACACCACCTAGCCCGTCACCCTCAATAACACAAACACATCAGTCAATACCTCAACAACTTGGTGTTATTGTTCCACCAATGACAAGAGTTACCACCCCAAAAGATGATTTTAAAGAGTTCAAAGATATCAAACGTGAACTTATGGCAACCGAAGATGATTCGAGAGAATGA
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIYVDDRVQFKAHRVVLAANSPYFQTILQGVPMDHCTILFPEVKAFEMRALLEYMYTGEVNVTQSQIPRIMKIARELEVKGLYDMADLKDLKDDQSHTFTALSNSTLKTNNHHNNTTLSNTSHSNNINNHNQHNLHHSHNQSSPIITTSTNITQAQSSSSSPPYSYKSPYSSLYSRSPVPTSSDRLPQWPPHLPQSIPSQHLQNAAAAMLSSVYDSGSDMNPLKRKKLSSISSMLMSRDTPILRNVLAQSNAADSSQPVPLVCQTVDNDRSDRHSGHSNGTDYSDKKIKYEEAHSPYTDKSFDDEPLDHSQSYSGSDSRIASYVPQQKPEWKRYKQYTRNDILSAIDCVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRSIKRSPSHGGSPAGFPYGITGTSSPYGHHTQESHPSQSQHDNERDHIPPTIPHPAAALLDATFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPGILMKYIRPSTPSPTPEKLEDSDHVEDLSMSKKDTDRSVTPMSGSHTPPSPSPSITQTHQSIPQQLGVIVPPMTRVTTPKDDFKEFKDIKRELMATEDDSRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00456262;
- 90% Identity
- iTF_00456262;
- 80% Identity
- iTF_00456262;