Dgla023820.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- ttk_1
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:205784337-205797910[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-16 2.2e-13 52.1 0.0 2 45 479 523 478 523 0.95
Sequence Information
- Coding Sequence
- atgtctgttcaacaattttgtttacGATGGAATAATCATCAACCAAATTTTATATCTGTTTTTTCTACACTTTTACACAATGAAACGCTTGTTGATGTAACTCTTGCCGCCGAGGGAAGACAACTCCAAGCGCATAAAGTTGTTCTATCAGCATGTAGCTCATATTTTCAGACATTGTTTACAACAAATCCGTGTCAACATCCTATTGTTATATTAAAAGATGTACAGtataatcatttaaaaacaaTGGTTGATTTTATGTATTATGGTGAGGTAAATGTATCGCAAGAACAATTACCTCATATATTAAAAACGGCTGAAATGCTTAAAATAAAAGGGTTAGCTGAAATGCCGGATGCAACATCACTTACAAAATCAGAATCAAAATCATCATCATCTGATCATATAGAACAAATAGCTAACATGGCTAGTGATTCAATATGGGGGAGTACAGAGTCTCAACATTTTCACCATCAGCAACAACAAAGAAGAACGCCATCTCCGGTCTCAGTTTCACCGTCGAATGCAAGAAGAAAGAGATTACGAAAAAATTCGATAggTTCTGGTTCTGCGTCAACAGAAAGAATATCAGAAGAGCAGAGTAATGTTGATGTCAGTTCGAATATAAATTTGGCACCCATTGATCAAATGTCATCATTTGGGAGTACACATGGTAATCAAGGAAATATTTCACAACATATAAATAGTTCTAGAATGTTAAAAGAAAGTTCGAGTACCGAAACAGATAACCCACATCAAGAATCATCACAAGAAAGTATTGATGAGTCAATGCATCATTCAAGTGTTATGaaAACAGATGATGATATTGCAAATGTTTCACAATCGATGCCATTGGATATAACAGGATCGTCGTCATCGGCTGGACAAACTCCTACCCTCAGTTGTTCTCAACCCCAACCGGGTGTGCAATGGACATTAATCGACTCAAACTATTCGAGATTTGCGTTGTCATCATATCAAACGAGTATGGGAATACAAACACCAGCAGGACATAATTCGGAAATTCATCAAAGCAATCAAAATAGTAACAACAGTACCaacagtaataataataacaataacaacaatagtgGAAATAATCCTTCCAATCAATCAAATCACGAATCAGTTCAACAAATGCAGTATCAACAGCAAGGTTCATCGTCATACTCACCGCAAATCATATCAGTTaatccaaataatttaatgaatagCTATCATTCAGGATTATCGACGCCACCGTCTCCATCACAAGAAAATGATTCAATGGTACAATCAGTATATAGCCAAGGACCAACACCATCACAATCGCCTATACCACAAATGAGTGGAATTTCAAATAGTAGTATTGGTAGTGGGAATGGCGGAAATGGTGGCAATGGAGCAAGTCAACTTGTGCCATTGAAAAGAAAACGATCAGTAAATCCTCAAGGAGATGAAAATTTCATAAGAGCTTTGGATGCGGTTAGATATGGTGGAATTGGTTTTTGTAAAGCCGCACGGTTGTATGGTGTAAATAACCGCACATTATGGTTGGAATATAAAAAACGGGGATATCCAATAAGTCGGCCCAgcataaaaaatagaattaaactAGAACCTAATGTTACACCACCGCCTCTATCACCATCCCAAACGAATGAAGAGAATACGATGGAGAATTATGACCATTTAACGCCAACGGCTATAAATATGGCTACGGTTTCTGCATCATCAGAGTCAACATCTACTCCGATAATGTGTCCACCTCATCCGATGGGTGTAATGAGCTTTTTAGATACACGACACGTTGATTTTCCGGCCGCATTACATCCGATGTCACGGCAACGGTATACCGATCCATCAATTAATGTTAATCCCGCAATAAATCTACAAGGACTCAATTTTAATTCtatgtaa
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVFSTLLHNETLVDVTLAAEGRQLQAHKVVLSACSSYFQTLFTTNPCQHPIVILKDVQYNHLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDATSLTKSESKSSSSDHIEQIANMASDSIWGSTESQHFHHQQQQRRTPSPVSVSPSNARRKRLRKNSIGSGSASTERISEEQSNVDVSSNINLAPIDQMSSFGSTHGNQGNISQHINSSRMLKESSSTETDNPHQESSQESIDESMHHSSVMKTDDDIANVSQSMPLDITGSSSSAGQTPTLSCSQPQPGVQWTLIDSNYSRFALSSYQTSMGIQTPAGHNSEIHQSNQNSNNSTNSNNNNNNNNSGNNPSNQSNHESVQQMQYQQQGSSSYSPQIISVNPNNLMNSYHSGLSTPPSPSQENDSMVQSVYSQGPTPSQSPIPQMSGISNSSIGSGNGGNGGNGASQLVPLKRKRSVNPQGDENFIRALDAVRYGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNVTPPPLSPSQTNEENTMENYDHLTPTAINMATVSASSESTSTPIMCPPHPMGVMSFLDTRHVDFPAALHPMSRQRYTDPSINVNPAINLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00456245;
- 90% Identity
- iTF_00456245;
- 80% Identity
- iTF_00456245;