Dgla046441.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- lov
- Assembly
- GCA_963693315.1
- Location
- OY856187.1:65360060-65364374[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-18 3.6e-15 57.8 0.0 1 44 27 70 27 71 0.96
Sequence Information
- Coding Sequence
- ATGGTCAAATGTCGCGGATTGGtGAATCGACCTAAAGGACAACATTCCGCCCCACGTGGTGGTCCACCACGTTCATGGACCAACGCTGAATTAACCGAAGCTCTACAACATGTATGGaacaaaaaaatgacaacaaGTCAAGCGTCAAGAATATTTGGAATTCCATACAACTCTTTATTAATGTACGTTCGTGGCAAatatggaaaaagtttaaaattagAACAGTTACGAAAAGATTGTATATCGGGTCCACCAATTGAACTATTAACAATGGGAATGAGCGgcaacaataataacaataataaaaattcatcacaaaataaaaatgatcTTAAAGACgagaatataaatttaaatttaccaCGATCATCATCATCGGAACCGGATCTCCTATCAAGTCCGACAATGTTTAATCCTTTCCCTCCAGGTTTTTATCCAGATTTTGCTAGCGGTTTTCCTGGATTACCATTAAgtgtattaaatttattaccaCCGGAACGACATAATCCACATCATTCAAGTAATATGTCCATTGATGAGGATTGTAAAAGTGATCGTTCAAAACAATCGATCGATGATGATTTCCCAAGCCAACCGTTAGCATTAAATCGTGATGATCGACGTGAGCTACTGCAACAAAATGGACAagattga
- Protein Sequence
- MVKCRGLVNRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLTMGMSGNNNNNNKNSSQNKNDLKDENINLNLPRSSSSEPDLLSSPTMFNPFPPGFYPDFASGFPGLPLSVLNLLPPERHNPHHSSNMSIDEDCKSDRSKQSIDDDFPSQPLALNRDDRRELLQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454769; iTF_01458253; iTF_01053074; iTF_01051837; iTF_01455568;
- 90% Identity
- -
- 80% Identity
- -